EG358327

Overview
NameEG358327
Unique NameEG358327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length539
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME_DAUCA (Pectinesterase OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.068e-26
Identity = 50/90 (55.56%), Postives = 68/90 (75.56%), Query Frame = 1
Query:  124 YSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 393
            YSRTV +++ + ++INPAGW  W G+FAL+TLYY EY NTG G++T+ RV W+G+ V+TS ++   FT G+FIAG SWL AT  PF+ GL
Sbjct:  230 YSRTVVMQSSITNVINPAGWFPWDGNFALDTLYYGEYQNTGAGAATSGRVTWKGFKVITSSTEAQGFTPGSFIAGGSWLKATTFPFSLGL 319          
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME7_ARATH (Probable pectinesterase/pectinesterase inhibitor 7 OS=Arabidopsis thaliana GN=PME7 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.068e-26
Identity = 51/90 (56.67%), Postives = 65/90 (72.22%), Query Frame = 1
Query:  124 YSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 393
            YSRTVY+++++D  + P GW EW+GDFAL+TLYYAEY NTGPGS+T NRV W GYHV+ S +  + FTV        W+  T VP+TSGL
Sbjct:  489 YSRTVYMQSYIDGFVEPVGWREWNGDFALSTLYYAEYNNTGPGSNTTNRVTWPGYHVINS-TDAANFTVTGLFIEADWIWKTGVPYTSGL 577          
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 9.231e-26
Identity = 50/90 (55.56%), Postives = 67/90 (74.44%), Query Frame = 1
Query:  124 YSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 393
            +SRTV++K  L +L++PAGW+ WSG FAL+TLYY EY NTG G+S + RVKW GYHV+ + ++  +FTV NF+ GN W+ AT VP   GL
Sbjct:  465 HSRTVFMKCNLGALVSPAGWLPWSGSFALSTLYYGEYGNTGAGASVSGRVKWPGYHVIKTVTEAEKFTVENFLDGNYWITATGVPVNDGL 554          
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.575e-25
Identity = 49/90 (54.44%), Postives = 69/90 (76.67%), Query Frame = 1
Query:  124 YSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 393
            YSRTV +++ +  LI+PAGW EW G+FALNTL+Y E+ N+G G+ T+ RVKW+G+ V+TS ++   FT G+FIAG+SWL +T  PF+ GL
Sbjct:  495 YSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584          
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.508e-25
Identity = 50/89 (56.18%), Postives = 67/89 (75.28%), Query Frame = 1
Query:  124 YSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSG 390
            YSRTV IK+F+D LI+PAGW+E   DFAL TLYY EYMN GPG++ A RV W G+  + + ++ +QFTVG FI G++WL +T +PF+ G
Sbjct:  443 YSRTVIIKSFIDDLIHPAGWLEGKKDFALETLYYGEYMNEGPGANMAKRVTWPGFRRIENQTEATQFTVGPFIDGSTWLNSTGIPFSLG 531          
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 4.581e-25
Identity = 48/88 (54.55%), Postives = 66/88 (75.00%), Query Frame = 1
Query:  124 YSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTS 387
            +S TV +K+F+D  INP GW+ W+GD A +T++YAEY+N+GPG+ST NRVKW+G     +  + ++FTV  FI GN+WLPAT VPF S
Sbjct:  475 FSTTVIMKSFMDKFINPKGWLPWTGDTAPDTIFYAEYLNSGPGASTKNRVKWQGLKTSLTKKEANKFTVKPFIDGNNWLPATKVPFNS 562          
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 4.581e-25
Identity = 48/90 (53.33%), Postives = 68/90 (75.56%), Query Frame = 1
Query:  124 YSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 393
            YSRTV +++ +  +I+PAGW EW G+FALNTL+Y E+ N G G+ T+ RVKW+G+ V+TS ++   FT G+FIAG+SWL +T  PF+ GL
Sbjct:  495 YSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584          
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.984e-25
Identity = 50/90 (55.56%), Postives = 64/90 (71.11%), Query Frame = 1
Query:  124 YSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 393
            YSRTV +++F+D  I+P+GW  WS +FAL TLYY E+ N+GPGSS + RV W GYH   + ++   FTV  FI GNSWLP+T V F SGL
Sbjct:  439 YSRTVVMQSFIDGSIHPSGWSPWSSNFALKTLYYGEFGNSGPGSSVSGRVSWAGYHPALTLTEAQGFTVSGFIDGNSWLPSTGVVFDSGL 528          
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.021e-24
Identity = 48/90 (53.33%), Postives = 67/90 (74.44%), Query Frame = 1
Query:  124 YSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 393
            YSRTV +++ +  +I PAGW EW+G+FAL+TL+Y EY NTG G+ T+ RVKW+G+ V+TS ++   +T G FIAG SWL +T  PF+ GL
Sbjct:  494 YSRTVIMQSSITDVIQPAGWHEWNGNFALDTLFYGEYANTGAGAPTSGRVKWKGHKVITSSTEAQAYTPGRFIAGGSWLSSTGFPFSLGL 583          
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 2.274e-24
Identity = 47/90 (52.22%), Postives = 64/90 (71.11%), Query Frame = 1
Query:  124 YSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 393
            YS+TV +++ +  +I P GW EW+G FALNTL Y EY NTG G+ TANRVKWRG+ V+T+ ++  ++T G FI G  WL +T  PF+ GL
Sbjct:  503 YSQTVIMQSAISDVIRPEGWSEWTGTFALNTLTYREYSNTGAGAGTANRVKWRGFKVITAAAEAQKYTAGQFIGGGGWLSSTGFPFSLGL 592          
The following BLAST results are available for this feature:
BLAST of EG358327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
PME_DAUCA7.068e-2655.56Pectinesterase OS=Daucus carota PE=1 SV=1[more]
PME7_ARATH7.068e-2656.67Probable pectinesterase/pectinesterase inhibitor 7... [more]
PME6_ARATH9.231e-2655.56Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME1_CITSI1.575e-2554.44Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PME39_ARATH3.508e-2556.18Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME46_ARATH4.581e-2554.55Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME3_CITSI4.581e-2553.33Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME35_ARATH5.984e-2555.56Probable pectinesterase/pectinesterase inhibitor 3... [more]
PMEU1_SOLLC1.021e-2453.33Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME3_ARATH2.274e-2452.22Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]

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Properties
Property NameValue
Genbank description13d8 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0013d8, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358327 ID=EG358327; Name=EG358327; organism=Citrus sinensis; type=EST; length=539bp
ACATGTAGTCCGGCAAATTTTTGAGATTTCAAGTTCAAATTGGTTTTGCA
GCAGAGCACATCATAGTATAGAATTGTATAAGTGATATGTATTTTCTTGG
ATATGGAGGGTTTTGTCCTCTTGTACTCGCGAACCGTTTATATCAAGACC
TTCCTTGACAGCTTGATAAACCCCGCTGGATGGATGGAATGGAGTGGTGA
TTTTGCTTTGAATACTCTGTATTATGCTGAGTATATGAACACTGGCCCGG
GTTCTTCAACTGCTAACAGAGTCAAGTGGCGTGGCTATCACGTTCTTACC
AGTCCGTCCCAGGTTAGCCAGTTCACCGTAGGCAACTTTATTGCTGGAAA
TTCTTGGTTGCCGGCCACCAACGTCCCCTTCACCTCCGGTCTCTAGGTTG
ATCATTCTTTGTTTATATTTTATTGCACATGAAATTAATACCAACTTGTT
GAGGTAATTAGGAGGAAAAATAATAATAATAAGGTAGTTAAAAGGAACTA
CCATCTTGGCATTGTCAGTTGTTATTCTTTGTGAAGTTG
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