EG358327

Overview
NameEG358327
Unique NameEG358327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length539
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.929e-15
Identity = 38/91 (41.76%), Postives = 54/91 (59.34%), Query Frame = 1
Query:  124 YSRTVYIKTFLDSLINPAGWMEWSGDFAL-NTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 393
            +S TV +++ + +L+NP GWM W  +     T++YAEY N+GPG+  + RVKW GY    +     +FTV +FI G  WLP   V F S L
Sbjct:  491 FSTTVIMQSDIGALLNPVGWMSWVPNVEPPTTIFYAEYQNSGPGADVSQRVKWAGYKPTITDRNAEEFTVQSFIQGPEWLPNAAVQFDSTL 581          
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.929e-15
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 1
Query:  124 YSRTVYIKTFLDSLINPAGWMEW-SGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNV 375
            +S TV ++T + +++ P+GWM W SG     ++ Y EY NTGPGS    RVKW GY  + S ++ ++FTV   + G  W+PAT V
Sbjct:  497 FSTTVIMETVIGAVVRPSGWMSWVSGVDPPASIVYGEYKNTGPGSDVTQRVKWAGYKPVMSDAEAAKFTVATLLHGADWIPATGV 581          
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME13_ARATH (Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana GN=PME13 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.520e-15
Identity = 38/91 (41.76%), Postives = 60/91 (65.93%), Query Frame = 1
Query:  124 YSRTVYIKTFLDSLINPAGWMEWSG-DFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 393
            YSRT+ +++ ++++I+P GW+ W   DFA++TLYYAEY N G    T +RVKW G+ V+ +  +   +TVG F+ G+ W+ A+  P   GL
Sbjct:  523 YSRTIIMESKIENVIDPVGWLRWQETDFAIDTLYYAEYNNKGSSGDTTSRVKWPGFKVI-NKEEALNYTVGPFLQGD-WISASGSPVKLGL 611          
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.613e-15
Identity = 34/84 (40.48%), Postives = 57/84 (67.86%), Query Frame = 1
Query:  121 LYSRTVYIKTFLDSLINPAGWMEWSGDF--ALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAG-NSWLP 363
            L+S+TV +++ + S +NPAGW+ W+  +     T++Y EY N+GPGS  + RVKW GY  ++S  + ++FTV  F+ G ++W+P
Sbjct:  876 LFSKTVIMQSVIGSFVNPAGWIAWNSTYDPPPRTIFYREYKNSGPGSDLSKRVKWAGYKPISSDDEAARFTVKYFLRGDDNWIP 959          
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME_PETIN (Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.133e-14
Identity = 34/92 (36.96%), Postives = 56/92 (60.87%), Query Frame = 1
Query:  124 YSRTVYIKTFLDSLINPAGWMEWS-GDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGN-SWLPATNVPFTSGL 393
            YSRT+ +++++D  I P GW  W+  +F  +T YYAEY N GPG++   R+ W+G+    +     +FT G +I  + +WL   NVP+ +G+
Sbjct:  280 YSRTIIMQSYIDKFIEPEGWAPWNITNFGRDTSYYAEYQNRGPGAALDKRITWKGFQKGFTGEAAQKFTAGVYINNDENWLQKANVPYEAGM 371          
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.448e-12
Identity = 35/90 (38.89%), Postives = 50/90 (55.56%), Query Frame = 1
Query:  124 YSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 393
            ++ T  I T +  LI P GW EW G+    T  Y E+ N GPG++TA RV W    +  S ++V +FTV N++   +W+   NVP   GL
Sbjct:  497 FATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANTAARVPWA--KMAKSAAEVERFTVANWLTPANWIQEANVPVQLGL 584          
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME5_ARATH (Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 5.809e-12
Identity = 34/90 (37.78%), Postives = 49/90 (54.44%), Query Frame = 1
Query:  124 YSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 393
            +S TV I + +  +I P GW  W G+    +  Y EY N GPG+ T  RV W    +  S ++V+ FTV N++   +W+   NVP T GL
Sbjct:  508 FSTTVIINSEIGDVIRPEGWKIWDGESFHKSCRYVEYNNRGPGAITNRRVNW--VKIARSAAEVNDFTVANWLGPINWIQEANVPVTLGL 595          
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME37_ARATH (Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana GN=VGDH2 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 9.909e-12
Identity = 34/90 (37.78%), Postives = 48/90 (53.33%), Query Frame = 1
Query:  124 YSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 393
            ++ TV I T +  LI P GW EW G+    T  Y E+ N GPG++T  R  W    V  S ++V  +TV N++   +W+   NVP   GL
Sbjct:  501 FATTVIIGTEIGDLIKPEGWTEWQGEQNHKTAKYIEFNNRGPGAATTQRPPW--VKVAKSAAEVETYTVANWVGPANWIQEANVPVQLGL 588          
BLAST of EG358327 vs. ExPASy Swiss-Prot
Match: PME4_ARATH (Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.883e-11
Identity = 34/90 (37.78%), Postives = 47/90 (52.22%), Query Frame = 1
Query:  124 YSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 393
            +S TV + T +  LI P GW  W G+    +  Y EY N GPG+    RV W    V  S ++V+ FT  N++   +W+   NVP T GL
Sbjct:  501 FSTTVIMSTEMGDLIRPEGWKIWDGESFHKSCRYVEYNNRGPGAFANRRVNWA--KVARSAAEVNGFTAANWLGPINWIQEANVPVTIGL 588          
The following BLAST results are available for this feature:
BLAST of EG358327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
PME3_PHAVU1.929e-1541.76Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]
PME1_ARATH1.929e-1542.35Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 P... [more]
PME13_ARATH2.520e-1541.76Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME26_ARATH5.613e-1540.48Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME_PETIN2.133e-1436.96Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=... [more]
PME_BRANA4.448e-1238.89Probable pectinesterase/pectinesterase inhibitor O... [more]
PME5_ARATH5.809e-1237.78Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 P... [more]
PME37_ARATH9.909e-1237.78Probable pectinesterase/pectinesterase inhibitor V... [more]
PME4_ARATH2.883e-1137.78Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 P... [more]

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Properties
Property NameValue
Genbank description13d8 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0013d8, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358327 ID=EG358327; Name=EG358327; organism=Citrus sinensis; type=EST; length=539bp
ACATGTAGTCCGGCAAATTTTTGAGATTTCAAGTTCAAATTGGTTTTGCA
GCAGAGCACATCATAGTATAGAATTGTATAAGTGATATGTATTTTCTTGG
ATATGGAGGGTTTTGTCCTCTTGTACTCGCGAACCGTTTATATCAAGACC
TTCCTTGACAGCTTGATAAACCCCGCTGGATGGATGGAATGGAGTGGTGA
TTTTGCTTTGAATACTCTGTATTATGCTGAGTATATGAACACTGGCCCGG
GTTCTTCAACTGCTAACAGAGTCAAGTGGCGTGGCTATCACGTTCTTACC
AGTCCGTCCCAGGTTAGCCAGTTCACCGTAGGCAACTTTATTGCTGGAAA
TTCTTGGTTGCCGGCCACCAACGTCCCCTTCACCTCCGGTCTCTAGGTTG
ATCATTCTTTGTTTATATTTTATTGCACATGAAATTAATACCAACTTGTT
GAGGTAATTAGGAGGAAAAATAATAATAATAAGGTAGTTAAAAGGAACTA
CCATCTTGGCATTGTCAGTTGTTATTCTTTGTGAAGTTG
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