EG358321

Overview
NameEG358321
Unique NameEG358321
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358321 vs. ExPASy Swiss-Prot
Match: CHS1_GERHY (Chalcone synthase 1 OS=Gerbera hybrida GN=CHS1 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 6.983e-32
Identity = 67/76 (88.16%), Postives = 71/76 (93.42%), Query Frame = 1
Query:    7 EVEEKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLETAGEGLEWGVLFGFGPGLTVETVVLHSV 234
            +VE KLGLK EKLRATRHVLSEYGNMSSACVLFI+DEMRKKS+E+G  T GEGLEWGVLFGFGPGLTVETVVLHSV
Sbjct:  315 QVELKLGLKEEKLRATRHVLSEYGNMSSACVLFIIDEMRKKSSENGAGTTGEGLEWGVLFGFGPGLTVETVVLHSV 390          
BLAST of EG358321 vs. ExPASy Swiss-Prot
Match: CHS5_PEA (Chalcone synthase 5 OS=Pisum sativum GN=CHS5 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 9.120e-32
Identity = 64/77 (83.12%), Postives = 73/77 (94.81%), Query Frame = 1
Query:    7 EVEEKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLETAGEGLEWGVLFGFGPGLTVETVVLHSVA 237
            +VE+KL LKPEK++ATR VLSEYGNMSSACVLFILDEMR+KS ++GL+T GEGLEWGVLFGFGPGLT+ETVVLHSVA
Sbjct:  312 QVEQKLALKPEKMKATREVLSEYGNMSSACVLFILDEMRRKSIQNGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVA 388          
BLAST of EG358321 vs. ExPASy Swiss-Prot
Match: CHS3_PEA (Chalcone synthase 3 OS=Pisum sativum GN=CHS3 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 9.120e-32
Identity = 64/77 (83.12%), Postives = 73/77 (94.81%), Query Frame = 1
Query:    7 EVEEKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLETAGEGLEWGVLFGFGPGLTVETVVLHSVA 237
            +VE+KL LKPEK++ATR VLSEYGNMSSACVLFILDEMR+KS ++GL+T GEGLEWGVLFGFGPGLT+ETVVLHSVA
Sbjct:  312 QVEQKLALKPEKMKATREVLSEYGNMSSACVLFILDEMRRKSIQNGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVA 388          
BLAST of EG358321 vs. ExPASy Swiss-Prot
Match: CHSY_PERFR (Chalcone synthase OS=Perilla frutescens GN=CHS PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.191e-31
Identity = 64/76 (84.21%), Postives = 71/76 (93.42%), Query Frame = 1
Query:    7 EVEEKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLETAGEGLEWGVLFGFGPGLTVETVVLHSV 234
            +VE KLGLKPEKLR+TRHVL EYGNMSSACVLFILDEMRK SA++G+ + GEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  312 QVEAKLGLKPEKLRSTRHVLGEYGNMSSACVLFILDEMRKSSAKEGMSSTGEGLDWGVLFGFGPGLTVETVVLHSV 387          
BLAST of EG358321 vs. ExPASy Swiss-Prot
Match: CHS4_SORBI (Chalcone synthase 4 OS=Sorghum bicolor GN=CHS4 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.191e-31
Identity = 65/76 (85.53%), Postives = 71/76 (93.42%), Query Frame = 1
Query:    7 EVEEKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLETAGEGLEWGVLFGFGPGLTVETVVLHSV 234
            +VE K+GLK E++RATRHVLSEYGNMSSACVLFILDEMRK+SAEDG  T GEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  316 QVEAKVGLKKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGLDWGVLFGFGPGLTVETVVLHSV 391          
BLAST of EG358321 vs. ExPASy Swiss-Prot
Match: CHSY_HYDMC (Chalcone synthase OS=Hydrangea macrophylla GN=CHS PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.556e-31
Identity = 65/77 (84.42%), Postives = 72/77 (93.51%), Query Frame = 1
Query:    7 EVEEKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLETAGEGLEWGVLFGFGPGLTVETVVLHSVA 237
            +VE+KL LKPEKLRATR+VLS+YGNMSSACVLFI+DEMRK SAE+GL T GEGLEWGVLFGFGPGLTVETVVLH V+
Sbjct:  312 QVEKKLALKPEKLRATRNVLSDYGNMSSACVLFIMDEMRKNSAEEGLMTTGEGLEWGVLFGFGPGLTVETVVLHGVS 388          
BLAST of EG358321 vs. ExPASy Swiss-Prot
Match: CHSA_PEA (Chalcone synthase 1A OS=Pisum sativum GN=CHS-1A PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.556e-31
Identity = 65/77 (84.42%), Postives = 71/77 (92.21%), Query Frame = 1
Query:    7 EVEEKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLETAGEGLEWGVLFGFGPGLTVETVVLHSVA 237
            +VE KLGLK  K++ATRHVLSEYGNMSSACVLFILDEMR+KS EDGL T GEGLEWGVLFGFGPGLTVETV+LHS+A
Sbjct:  312 QVEAKLGLKQRKMQATRHVLSEYGNMSSACVLFILDEMRRKSKEDGLATTGEGLEWGVLFGFGPGLTVETVLLHSMA 388          
BLAST of EG358321 vs. ExPASy Swiss-Prot
Match: CHS6_SOYBN (Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.556e-31
Identity = 66/76 (86.84%), Postives = 70/76 (92.11%), Query Frame = 1
Query:    7 EVEEKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLETAGEGLEWGVLFGFGPGLTVETVVLHSV 234
            +VE KLGLKPEK+ ATRHVLSEYGNMSSACVLFILD+MRKKS E+GL T GEGLEWGVLFGFGPGLTVETVVL SV
Sbjct:  311 QVEAKLGLKPEKMEATRHVLSEYGNMSSACVLFILDQMRKKSIENGLGTTGEGLEWGVLFGFGPGLTVETVVLRSV 386          
BLAST of EG358321 vs. ExPASy Swiss-Prot
Match: CHS3_RUTGR (Chalcone synthase 3 OS=Ruta graveolens GN=CHS3 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.556e-31
Identity = 67/76 (88.16%), Postives = 70/76 (92.11%), Query Frame = 1
Query:    7 EVEEKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLETAGEGLEWGVLFGFGPGLTVETVVLHSV 234
            +VEEKL LK EKLRATRHVLSEYGNMSSACVLFILDEMRKK AE+G+ T GEGLEWGVLFGFGPGLTVETVVL SV
Sbjct:  314 QVEEKLELKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKCAEEGMATTGEGLEWGVLFGFGPGLTVETVVLRSV 389          
BLAST of EG358321 vs. ExPASy Swiss-Prot
Match: CHSY_FRAAN (Chalcone synthase RJ5 (Fragment) OS=Fragaria ananassa PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.032e-31
Identity = 65/78 (83.33%), Postives = 72/78 (92.31%), Query Frame = 1
Query:    7 EVEEKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLETAGEGLEWGVLFGFGPGLTVETVVLHSVAA 240
            +VE KL LKPEKL ATRH+LSEYGNMSSACVLFILDE+R+KSA +G +T GEGLEWGVLFGFGPGLTVETVVLHSV+A
Sbjct:   22 QVEAKLALKPEKLEATRHILSEYGNMSSACVLFILDEVRRKSAANGHKTTGEGLEWGVLFGFGPGLTVETVVLHSVSA 99          
The following BLAST results are available for this feature:
BLAST of EG358321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CHS1_GERHY6.983e-3288.16Chalcone synthase 1 OS=Gerbera hybrida GN=CHS1 PE=... [more]
CHS5_PEA9.120e-3283.12Chalcone synthase 5 OS=Pisum sativum GN=CHS5 PE=3 ... [more]
CHS3_PEA9.120e-3283.12Chalcone synthase 3 OS=Pisum sativum GN=CHS3 PE=3 ... [more]
CHSY_PERFR1.191e-3184.21Chalcone synthase OS=Perilla frutescens GN=CHS PE=... [more]
CHS4_SORBI1.191e-3185.53Chalcone synthase 4 OS=Sorghum bicolor GN=CHS4 PE=... [more]
CHSY_HYDMC1.556e-3184.42Chalcone synthase OS=Hydrangea macrophylla GN=CHS ... [more]
CHSA_PEA1.556e-3184.42Chalcone synthase 1A OS=Pisum sativum GN=CHS-1A PE... [more]
CHS6_SOYBN1.556e-3186.84Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV... [more]
CHS3_RUTGR1.556e-3188.16Chalcone synthase 3 OS=Ruta graveolens GN=CHS3 PE=... [more]
CHSY_FRAAN2.032e-3183.33Chalcone synthase RJ5 (Fragment) OS=Fragaria anana... [more]

Pages

back to top
Properties
Property NameValue
Genbank description2f12 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl002f12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358321 ID=EG358321; Name=EG358321; organism=Citrus sinensis; type=EST; length=551bp
ACGCGGGAAGTCGAGGAGAAGCTGGGGCTGAAGCCCGAAAAGCTGCGGGC
CACGAGGCATGTGCTTTCGGAGTATGGCAACATGTCGAGCGCTTGTGTGT
TGTTTATTTTGGACGAGATGAGGAAGAAATCAGCTGAAGATGGCTTAGAG
ACCGCAGGAGAAGGGCTTGAGTGGGGAGTCCTTTTTGGGTTTGGGCCTGG
GCTCACTGTTGAGACCGTGGTCCTCCACAGTGTTGCCGCTGCTTAAGGTT
AAAAAGCACCTATTGGTGTGGTTGGTTTGACTCACTTTTCCCTCCGGCTT
TGTTTATTTTTCGCTGTTATTTGGTCTTTATTTTCCTTTTTCTAAAAGAA
AGTGTGTCGGGGAAGTAATTATGTTGTGCAATGCATATGCTTGATTTCAG
ACTTTTTAGATTTGTAGACTGTAATCATAAAATCTGCAGGATTCATGTTT
CGGTTTGTGTTATGAAAAAATAATGATTAAGTTTCATGAATGATTTAATG
AAAAATGTTAAATCCTTTTTTCGAAAAAAAAAAAAAAAAAAAAAAAAAAA
G
back to top