EG358318

Overview
NameEG358318
Unique NameEG358318
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length557
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358318 vs. ExPASy Swiss-Prot
Match: PDC1_KLUMA (Pyruvate decarboxylase OS=Kluyveromyces marxianus GN=PDC1 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.165e-20
Identity = 65/182 (35.71%), Postives = 93/182 (51.10%), Query Frame = 3
Query:   15 KKEKAVILQPDRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSV----PEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH 548
            K +  V    D + + N   F  V MK  L+ L  ++K     Y+     + P    P  +   PL+   ++  + K L     V+ ETG S F   +   P       Q+ +GSIG++ GATLG A +     P+KRVI  IGDGS Q+T Q++STM+R G K  +F++NN GYTIE  IH
Sbjct:  302 KTKNIVEFHSDYIKVRNA-TFPGVQMKFVLQKLLTKVKDAAKGYKPVPVPHAPRDNKPVAD-STPLKQEWVWTQVGKFLQEGDVVLTETGTSAFGINQTHFPNDTYGISQVLWGSIGFTGGATLGAAFAAEEIDPKKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNNDGYTIERLIH 481          
BLAST of EG358318 vs. ExPASy Swiss-Prot
Match: PDC1_KLULA (Pyruvate decarboxylase OS=Kluyveromyces lactis GN=PDC1 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 5.333e-19
Identity = 61/154 (39.61%), Postives = 83/154 (53.90%), Query Frame = 3
Query:  108 ALSKRLKSNTTAYENYHRIYVPEGQPPKCEP---KEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSV----PEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH 548
            AL K L     A + Y  + VP  +P   E      PL+   ++  + + L     VI ETG S F   +   P       Q+ +GSIG++ GATLG A +     P+KRVI  IGDGS Q+T Q++STM+R G K  +F++NN GYTIE  IH
Sbjct:  329 ALQKLLTKVADAAKGYKPVPVPS-EPEHNEAVADSTPLKQEWVWTQVGEFLREGDVVITETGTSAFGINQTHFPNNTYGISQVLWGSIGFTTGATLGAAFAAEEIDPKKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNNDGYTIERLIH 481          
BLAST of EG358318 vs. ExPASy Swiss-Prot
Match: PDC_HANUV (Pyruvate decarboxylase OS=Hanseniaspora uvarum GN=PDC PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.647e-18
Identity = 64/177 (36.16%), Postives = 92/177 (51.98%), Query Frame = 3
Query:   45 DRVVIANGPAFGCVLMKDFLKALSKRLKSNTTAYENYHRIYVPEGQPPKCEPKE--PLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPE----KRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGP 557
            D + I N  +F  V MK  L+ L  ++ +      NY  + VP G P      +  PL    L+  + + L     V+ ETG S F   + + P       Q+ +GSIG+SVGA +G   +  E    KRVI  +GDGS Q+T Q+++ ++R G K  IF++NN GYTIE  IH GP
Sbjct:  312 DYIKIKNA-SFPGVQMKFVLEKLIAKVGAKIA---NYSPVPVPAGLPKNAPVADSTPLAQEWLWNELGEFLEEGDIVVTETGTSAFGINQTRFPTDAYGISQVLWGSIGYSVGAMVGATFAAEELDKAKRVILFVGDGSLQLTVQEIACLIRWGLKPYIFVLNNNGYTIEKLIH-GP 483          
BLAST of EG358318 vs. ExPASy Swiss-Prot
Match: KDC_MYCTU (Alpha-keto-acid decarboxylase OS=Mycobacterium tuberculosis GN=kdc PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.519e-17
Identity = 44/128 (34.38%), Postives = 74/128 (57.81%), Query Frame = 3
Query:  171 PEGQPPKCEPK--EPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH 548
            P  +PP   P   EPL   +++  +   L+    V+A+ G S++     +LP+G  +  Q  +GSIG+++ A +G A + P++R +  IGDG+ Q+T Q++ T  R G   +I ++NN GYT+E  IH
Sbjct:  356 PPAEPPPAMPARDEPLTQQMVWDRVCSALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIGYTLPAAVGAAVAHPDRRTVLLIGDGAAQLTVQELGTFSREGLSPVIVVVNNDGYTVERAIH 483          
BLAST of EG358318 vs. ExPASy Swiss-Prot
Match: KDC_MYCTA (Alpha-keto-acid decarboxylase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=kdc PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.519e-17
Identity = 44/128 (34.38%), Postives = 74/128 (57.81%), Query Frame = 3
Query:  171 PEGQPPKCEPK--EPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH 548
            P  +PP   P   EPL   +++  +   L+    V+A+ G S++     +LP+G  +  Q  +GSIG+++ A +G A + P++R +  IGDG+ Q+T Q++ T  R G   +I ++NN GYT+E  IH
Sbjct:  356 PPAEPPPAMPARDEPLTQQMVWDRVCSALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIGYTLPAAVGAAVAHPDRRTVLLIGDGAAQLTVQELGTFSREGLSPVIVVVNNDGYTVERAIH 483          
BLAST of EG358318 vs. ExPASy Swiss-Prot
Match: KDC_MYCBP (Alpha-keto-acid decarboxylase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=kdc PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.519e-17
Identity = 44/128 (34.38%), Postives = 74/128 (57.81%), Query Frame = 3
Query:  171 PEGQPPKCEPK--EPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH 548
            P  +PP   P   EPL   +++  +   L+    V+A+ G S++     +LP+G  +  Q  +GSIG+++ A +G A + P++R +  IGDG+ Q+T Q++ T  R G   +I ++NN GYT+E  IH
Sbjct:  356 PPAEPPPAMPARDEPLTQQMVWDRVCSALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIGYTLPAAVGAAVAHPDRRTVLLIGDGAAQLTVQELGTFSREGLSPVIVVVNNDGYTVERAIH 483          
BLAST of EG358318 vs. ExPASy Swiss-Prot
Match: KDC_MYCBO (Alpha-keto-acid decarboxylase OS=Mycobacterium bovis GN=kdc PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.519e-17
Identity = 44/128 (34.38%), Postives = 74/128 (57.81%), Query Frame = 3
Query:  171 PEGQPPKCEPK--EPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH 548
            P  +PP   P   EPL   +++  +   L+    V+A+ G S++     +LP+G  +  Q  +GSIG+++ A +G A + P++R +  IGDG+ Q+T Q++ T  R G   +I ++NN GYT+E  IH
Sbjct:  356 PPAEPPPAMPARDEPLTQQMVWDRVCSALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIGYTLPAAVGAAVAHPDRRTVLLIGDGAAQLTVQELGTFSREGLSPVIVVVNNDGYTVERAIH 483          
BLAST of EG358318 vs. ExPASy Swiss-Prot
Match: KDC_MYCUA (Alpha-keto-acid decarboxylase OS=Mycobacterium ulcerans (strain Agy99) GN=kdc PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.112e-16
Identity = 45/131 (34.35%), Postives = 76/131 (58.02%), Query Frame = 3
Query:  162 IYVPEGQPPKCEPK--EPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH 548
            + VP  +P    P+  EPL   +L+  + + L+    V+A+ G S++     +LP+G  +  Q  +GSIG+++ A LG A + P++R +  IGDG+ Q+T Q++    R G   +I ++NN GYT+E  IH
Sbjct:  353 VAVPPAEPGPPTPRRDEPLNQEMLWNRLCEALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIGYTLPAALGAAVAHPDRRTVLLIGDGAAQLTVQELGIFSREGLSPVIVVVNNDGYTVERAIH 483          
BLAST of EG358318 vs. ExPASy Swiss-Prot
Match: KDC_MYCPA (Alpha-keto-acid decarboxylase OS=Mycobacterium paratuberculosis GN=kdc PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.452e-16
Identity = 43/125 (34.40%), Postives = 73/125 (58.40%), Query Frame = 3
Query:  174 EGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH 548
            E  PP    ++PL   +++  +   L+    V+A+ G S++     +LP+G  +  Q  +GSIG+++ A LG A + P++R +  IGDG+ Q+T Q++ T  R G   +I ++NN GYT+E  IH
Sbjct:  357 EPLPPPPPREQPLTQKMVWDRVCTALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIGYTLPAALGAAVAHPDRRTVLLIGDGAAQLTVQELGTFAREGLSPVIVVVNNDGYTVERAIH 481          
BLAST of EG358318 vs. ExPASy Swiss-Prot
Match: KDC_MYCA1 (Alpha-keto-acid decarboxylase OS=Mycobacterium avium (strain 104) GN=kdc PE=3 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.452e-16
Identity = 43/125 (34.40%), Postives = 73/125 (58.40%), Query Frame = 3
Query:  174 EGQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH 548
            E  PP    ++PL   +++  +   L+    V+A+ G S++     +LP+G  +  Q  +GSIG+++ A LG A + P++R +  IGDG+ Q+T Q++ T  R G   +I ++NN GYT+E  IH
Sbjct:  357 EPLPPPPPREQPLTQKMVWDRVCTALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIGYTLPAALGAAVAHPDRRTVLLIGDGAAQLTVQELGTFAREGLSPVIVVVNNDGYTVERAIH 481          
The following BLAST results are available for this feature:
BLAST of EG358318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
PDC1_KLUMA2.165e-2035.71Pyruvate decarboxylase OS=Kluyveromyces marxianus ... [more]
PDC1_KLULA5.333e-1939.61Pyruvate decarboxylase OS=Kluyveromyces lactis GN=... [more]
PDC_HANUV2.647e-1836.16Pyruvate decarboxylase OS=Hanseniaspora uvarum GN=... [more]
KDC_MYCTU6.519e-1734.38Alpha-keto-acid decarboxylase OS=Mycobacterium tub... [more]
KDC_MYCTA6.519e-1734.38Alpha-keto-acid decarboxylase OS=Mycobacterium tub... [more]
KDC_MYCBP6.519e-1734.38Alpha-keto-acid decarboxylase OS=Mycobacterium bov... [more]
KDC_MYCBO6.519e-1734.38Alpha-keto-acid decarboxylase OS=Mycobacterium bov... [more]
KDC_MYCUA1.112e-1634.35Alpha-keto-acid decarboxylase OS=Mycobacterium ulc... [more]
KDC_MYCPA1.452e-1634.40Alpha-keto-acid decarboxylase OS=Mycobacterium par... [more]
KDC_MYCA11.452e-1634.40Alpha-keto-acid decarboxylase OS=Mycobacterium avi... [more]

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Properties
Property NameValue
Genbank description6d8 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0006d8, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358318 ID=EG358318; Name=EG358318; organism=Citrus sinensis; type=EST; length=557bp
ACTCTCTTCTTCTCAAGAAGGAGAAGGCAGTCATTCTGCAGCCTGATCGT
GTGGTGATTGCTAATGGACCGGCATTTGGTTGTGTTTTGATGAAGGATTT
CCTCAAAGCACTTTCAAAGCGGCTCAAAAGCAACACTACTGCTTATGAGA
ATTACCACAGGATTTATGTTCCTGAGGGGCAACCTCCGAAGTGTGAACCC
AAAGAGCCCTTGAGAGTGAATGTTCTGTTCCAACATATACAGAAGATGCT
GTCTAGTGAAACTGCTGTGATTGCTGAGACAGGGGACTCTTGGTTTAACT
GCCAGAAACTGAAATTGCCTAAGGGATGCGGGTATGAGTTCCAAATGCAA
TATGGATCAATTGGTTGGTCTGTTGGTGCTACTCTTGGATATGCACAGTC
TGTGCCAGAGAAGCGTGTCATTGCTTGCATAGGTGATGGTAGCTTCCAGG
TAACTGCACAAGATGTGTCAACAATGCTGCGATGTGGGCAGAAGACTATA
ATCTTCCTGATTAACAATGGTGGTTACACCATTGAAGTTGAGATCCATGA
TGGACCG
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