EG358318

Overview
NameEG358318
Unique NameEG358318
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length557
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358318 vs. ExPASy Swiss-Prot
Match: PDC4_SCHPO (Putative pyruvate decarboxylase C3G9.11c OS=Schizosaccharomyces pombe GN=SPAC3G9.11c PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.226e-16
Identity = 50/105 (47.62%), Postives = 59/105 (56.19%), Query Frame = 3
Query:  249 LSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGA----TLGYAQS-VPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH 548
            L     V  ETG S F       PKGC    Q+ +GSIGWSVGA    TLG   S  P +R I  +GDGS  +T Q++S  +R G   IIF+INN GYTIE  IH
Sbjct:  384 LRESDVVTTETGTSNFGILDCIFPKGCQNLSQVLWGSIGWSVGAMFGATLGIKDSDAPHRRSILIVGDGSLHLTVQEISATIRNGLTPIIFVINNKGYTIERLIH 488          
BLAST of EG358318 vs. ExPASy Swiss-Prot
Match: PDC_ASPOR (Pyruvate decarboxylase OS=Aspergillus oryzae GN=pdcA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.097e-15
Identity = 48/110 (43.64%), Postives = 65/110 (59.09%), Query Frame = 3
Query:  225 LFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPE--KRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH 548
            L+  + + L  +  VI ETG + F     + P G     Q+ +GSIG+SVGA  G A +  E  +R +  +GDGSFQ+T Q+VSTM+R     IIF+I N GYTIE  IH
Sbjct:  378 LWPTVGQWLKEKDVVITETGTANFGIWDTRFPAGVTAISQVLWGSIGYSVGACQGAALAAKEQGRRTVLFVGDGSFQLTLQEVSTMIRNNLNPIIFVICNEGYTIERYIH 487          
BLAST of EG358318 vs. ExPASy Swiss-Prot
Match: PDC_ASPFU (Pyruvate decarboxylase OS=Aspergillus fumigatus GN=pdcA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.739e-15
Identity = 52/127 (40.94%), Postives = 70/127 (55.12%), Query Frame = 3
Query:  186 PKCEPK---EPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPE---KRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH 548
            P  EPK   +P+     +  I + L     VI ETG + F   + + P G     Q+ +GSIG+SVGA  G A +  E   +R I  +GDGS Q+T Q++STM+R     IIF+I N GYTIE  IH
Sbjct:  362 PDDEPKSGDQPITHRWFWPKIGQWLKENDIVITETGTANFGIWETRFPAGVTAISQVLWGSIGYSVGACQGAALAAKEQGNRRTILFVGDGSIQLTLQEISTMIRNKLNPIIFVICNEGYTIERYIH 488          
BLAST of EG358318 vs. ExPASy Swiss-Prot
Match: PDC1_SCHPO (Putative pyruvate decarboxylase C13A11.06 OS=Schizosaccharomyces pombe GN=SPAC13A11.06 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.041e-14
Identity = 45/107 (42.06%), Postives = 61/107 (57.01%), Query Frame = 3
Query:  243 KMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSV-----PEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH 548
            + L     +I ETG + F     + PK      Q+ +GSIG+SVGA  G   +V     P++R I  +GDGS Q+T  ++ST +R   K IIF+INN GYTIE  IH
Sbjct:  381 EFLKPRDVLITETGTANFGVLDCRFPKDVTAISQVLWGSIGYSVGAMFGAVLAVHDSKEPDRRTILVVGDGSLQLTITEISTCIRHNLKPIIFIINNDGYTIERLIH 487          
BLAST of EG358318 vs. ExPASy Swiss-Prot
Match: DCIP_ENTCL (Indole-3-pyruvate decarboxylase OS=Enterobacter cloacae GN=ipdC PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.041e-14
Identity = 43/124 (34.68%), Postives = 67/124 (54.03%), Query Frame = 3
Query:  177 GQPPKCEPKEPLRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH 548
            G  P  +P   L     ++ +Q  +     ++A+ G S F    L+LP    +  Q  +GSIG+++ A  G   + P +RVI   GDG+ Q+T Q++ +MLR  Q  II ++NN GYT+E  IH
Sbjct:  349 GAIPFPQPDGSLTQENFWRTLQTFIRPGDIILADQGTSAFGAIDLRLPADVNFIVQPLWGSIGYTLAAAFGAQTACPNRRVIVLTGDGAAQLTIQELGSMLRDKQHPIILVLNNEGYTVERAIH 472          
BLAST of EG358318 vs. ExPASy Swiss-Prot
Match: PDC_EMENI (Pyruvate decarboxylase OS=Emericella nidulans GN=pdcA PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 5.165e-14
Identity = 45/107 (42.06%), Postives = 61/107 (57.01%), Query Frame = 3
Query:  237 IQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPE---KRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH 548
            + + L     VI ETG + F     + P G     Q+ +GSIG+SVGA  G A +  E   +R +  +GDGS Q+T Q++STM+R     IIF+I N GYTIE  IH
Sbjct:  381 VGQWLKENDIVITETGTANFGIWDTRFPSGVTAISQVLWGSIGYSVGACQGAALAAKEQGNRRTVLWVGDGSLQLTLQEISTMIRNNLNPIIFVICNEGYTIERFIH 487          
BLAST of EG358318 vs. ExPASy Swiss-Prot
Match: KDC_MYCLE (Alpha-keto-acid decarboxylase OS=Mycobacterium leprae GN=kdc PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.503e-13
Identity = 40/131 (30.53%), Postives = 72/131 (54.96%), Query Frame = 3
Query:  162 IYVPEGQPPKCEPKEPLRVN--VLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH 548
            + +P G P    P    R+   +L+  +   L+    V+A+ G +++   + +LP+G  +  Q  +GSIG+++ A LG   +   +R +  +GDG+ Q+T Q++ +  R G   +I ++NN GYTIE  IH
Sbjct:  349 VELPPGNPTADTPSPTQRLTQQILWDRLCAALTPGNVVLADQGTAFYGMVEHRLPRGVTFIGQPLWGSIGYTLPAALGAGLAHRNRRTVLLLGDGAAQLTIQELGSFYREGLSPVIVVVNNDGYTIERAIH 479          
BLAST of EG358318 vs. ExPASy Swiss-Prot
Match: PDC_ASPTN (Pyruvate decarboxylase OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pdcA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.564e-13
Identity = 44/111 (39.64%), Postives = 62/111 (55.86%), Query Frame = 3
Query:  225 LFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPE---KRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH 548
            L+  + + L     VI ETG + F     + P       Q+ +GSIG+SVGA  G A +  E   +R +  +GDGS Q+T Q++STM+R     I+F+I N GYTIE  IH
Sbjct:  378 LWPIVGQWLKERDIVITETGTANFGIWDTRFPANVTAISQVLWGSIGYSVGACQGAALAAKEQNNRRTVLFVGDGSLQLTVQEISTMIRNNLNPIVFVICNQGYTIERFIH 488          
BLAST of EG358318 vs. ExPASy Swiss-Prot
Match: THI3_YEAST (Thiamine metabolism regulatory protein THI3 OS=Saccharomyces cerevisiae GN=THI3 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.247e-12
Identity = 46/144 (31.94%), Postives = 71/144 (49.31%), Query Frame = 3
Query:  165 YVPEGQPPKCEPKEPLRVNVLFQH------IQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPE----------KRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH 548
            Y P  QP    P+     NVL +       I         +I ETG S F   + + P       Q  +GS+G+++GA LG   +V E           RVI  +GDG+FQ+T Q++ST+++ G    IF++NN GY+++  +H
Sbjct:  355 YQPSEQPSMMVPRPYPAGNVLLRQEWVWNEISHWFQPGDIIITETGASAFGVNQTRFPVNTLGISQALWGSVGYTMGACLGAEFAVQEINKDKFPATKHRVILFMGDGAFQLTVQELSTIVKWGLTPYIFVMNNQGYSVDRFLH 498          
BLAST of EG358318 vs. ExPASy Swiss-Prot
Match: KDC_MYCS2 (Alpha-keto-acid decarboxylase OS=Mycobacterium smegmatis GN=kdc PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.247e-12
Identity = 38/127 (29.92%), Postives = 67/127 (52.76%), Query Frame = 3
Query:  171 PEGQPPKCEPKEP-LRVNVLFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH 548
            P  Q P   P++  L    L+  + + L+    V+A+ G S++     +L  G  +  Q  + SIG+++ A LG   +  ++R +  IGDG+ Q+T Q++    R G   ++ ++NN GYT+E  IH
Sbjct:  349 PAPQRPAAPPRDAVLTQEALWDRLAEALTPGNVVLADQGTSFYGLAGHRLASGVTFIGQPLWASIGYTLPAALGAGLADRDRRTVLLIGDGAAQLTVQELGAFGREGLTPVVVVVNNNGYTVERAIH 475          
The following BLAST results are available for this feature:
BLAST of EG358318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
PDC4_SCHPO4.226e-1647.62Putative pyruvate decarboxylase C3G9.11c OS=Schizo... [more]
PDC_ASPOR2.097e-1543.64Pyruvate decarboxylase OS=Aspergillus oryzae GN=pd... [more]
PDC_ASPFU2.739e-1540.94Pyruvate decarboxylase OS=Aspergillus fumigatus GN... [more]
PDC1_SCHPO1.041e-1442.06Putative pyruvate decarboxylase C13A11.06 OS=Schiz... [more]
DCIP_ENTCL1.041e-1434.68Indole-3-pyruvate decarboxylase OS=Enterobacter cl... [more]
PDC_EMENI5.165e-1442.06Pyruvate decarboxylase OS=Emericella nidulans GN=p... [more]
KDC_MYCLE1.503e-1330.53Alpha-keto-acid decarboxylase OS=Mycobacterium lep... [more]
PDC_ASPTN2.564e-1339.64Pyruvate decarboxylase OS=Aspergillus terreus (str... [more]
THI3_YEAST8.247e-1231.94Thiamine metabolism regulatory protein THI3 OS=Sac... [more]
KDC_MYCS28.247e-1229.92Alpha-keto-acid decarboxylase OS=Mycobacterium sme... [more]

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Properties
Property NameValue
Genbank description6d8 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0006d8, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358318 ID=EG358318; Name=EG358318; organism=Citrus sinensis; type=EST; length=557bp
ACTCTCTTCTTCTCAAGAAGGAGAAGGCAGTCATTCTGCAGCCTGATCGT
GTGGTGATTGCTAATGGACCGGCATTTGGTTGTGTTTTGATGAAGGATTT
CCTCAAAGCACTTTCAAAGCGGCTCAAAAGCAACACTACTGCTTATGAGA
ATTACCACAGGATTTATGTTCCTGAGGGGCAACCTCCGAAGTGTGAACCC
AAAGAGCCCTTGAGAGTGAATGTTCTGTTCCAACATATACAGAAGATGCT
GTCTAGTGAAACTGCTGTGATTGCTGAGACAGGGGACTCTTGGTTTAACT
GCCAGAAACTGAAATTGCCTAAGGGATGCGGGTATGAGTTCCAAATGCAA
TATGGATCAATTGGTTGGTCTGTTGGTGCTACTCTTGGATATGCACAGTC
TGTGCCAGAGAAGCGTGTCATTGCTTGCATAGGTGATGGTAGCTTCCAGG
TAACTGCACAAGATGTGTCAACAATGCTGCGATGTGGGCAGAAGACTATA
ATCTTCCTGATTAACAATGGTGGTTACACCATTGAAGTTGAGATCCATGA
TGGACCG
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