EG358315

Overview
NameEG358315
Unique NameEG358315
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length573
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM2_STAAR (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain MRSA252) GN=sodM PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.002e-23
Identity = 65/174 (37.36%), Postives = 92/174 (52.87%), Query Frame = 3
Query:    6 YSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE----------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYR 497
            Y ALEP I    M+ HH KHH  YVT  N  VE           +   L+KV  +    ++ +++ NGGGH NHS+FW+ L+P  E  G          I   +G+L+    + + +   L GSGW WL ++    +L + TT NQD  +T+  T  P+L  DVWEHAYYL+Y+
Sbjct:   12 YDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTELEHQSLADMIANLDKVPEA----MRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD-----IKAQWGTLDEFKNEFANKATTLFGSGWTWLVVND--GKLEIVTTPNQDNPLTEGKT--PILLFDVWEHAYYLKYQ 172          
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM2_STAAN (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain N315) GN=sodM PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.002e-23
Identity = 65/174 (37.36%), Postives = 92/174 (52.87%), Query Frame = 3
Query:    6 YSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE----------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYR 497
            Y ALEP I    M+ HH KHH  YVT  N  VE           +   L+KV  +    ++ +++ NGGGH NHS+FW+ L+P  E  G          I   +G+L+    + + +   L GSGW WL ++    +L + TT NQD  +T+  T  P+L  DVWEHAYYL+Y+
Sbjct:   12 YDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTELEHQSLADMIANLDKVPEA----MRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD-----IKAQWGTLDEFKNEFANKATTLFGSGWTWLVVND--GKLEIVTTPNQDNPLTEGKT--PILLFDVWEHAYYLKYQ 172          
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM2_STAAM (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=sodM PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.002e-23
Identity = 65/174 (37.36%), Postives = 92/174 (52.87%), Query Frame = 3
Query:    6 YSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE----------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYR 497
            Y ALEP I    M+ HH KHH  YVT  N  VE           +   L+KV  +    ++ +++ NGGGH NHS+FW+ L+P  E  G          I   +G+L+    + + +   L GSGW WL ++    +L + TT NQD  +T+  T  P+L  DVWEHAYYL+Y+
Sbjct:   12 YDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTELEHQSLADMIANLDKVPEA----MRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD-----IKAQWGTLDEFKNEFANKATTLFGSGWTWLVVND--GKLEIVTTPNQDNPLTEGKT--PILLFDVWEHAYYLKYQ 172          
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM2_STAAC (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain COL) GN=sodM PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.002e-23
Identity = 65/174 (37.36%), Postives = 92/174 (52.87%), Query Frame = 3
Query:    6 YSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE----------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYR 497
            Y ALEP I    M+ HH KHH  YVT  N  VE           +   L+KV  +    ++ +++ NGGGH NHS+FW+ L+P  E  G          I   +G+L+    + + +   L GSGW WL ++    +L + TT NQD  +T+  T  P+L  DVWEHAYYL+Y+
Sbjct:   12 YDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTELEHQSLADMIANLDKVPEA----MRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD-----IKAQWGTLDEFKNEFANKATTLFGSGWTWLVVND--GKLEIVTTPNQDNPLTEGKT--PILLFDVWEHAYYLKYQ 172          
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM2_STAA8 (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain NCTC 8325) GN=sodM PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.002e-23
Identity = 65/174 (37.36%), Postives = 92/174 (52.87%), Query Frame = 3
Query:    6 YSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE----------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYR 497
            Y ALEP I    M+ HH KHH  YVT  N  VE           +   L+KV  +    ++ +++ NGGGH NHS+FW+ L+P  E  G          I   +G+L+    + + +   L GSGW WL ++    +L + TT NQD  +T+  T  P+L  DVWEHAYYL+Y+
Sbjct:   12 YDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTELEHQSLADMIANLDKVPEA----MRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD-----IKAQWGTLDEFKNEFANKATTLFGSGWTWLVVND--GKLEIVTTPNQDNPLTEGKT--PILLFDVWEHAYYLKYQ 172          
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM2_STAA3 (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain USA300) GN=sodM PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.002e-23
Identity = 65/174 (37.36%), Postives = 92/174 (52.87%), Query Frame = 3
Query:    6 YSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE----------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYR 497
            Y ALEP I    M+ HH KHH  YVT  N  VE           +   L+KV  +    ++ +++ NGGGH NHS+FW+ L+P  E  G          I   +G+L+    + + +   L GSGW WL ++    +L + TT NQD  +T+  T  P+L  DVWEHAYYL+Y+
Sbjct:   12 YDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTELEHQSLADMIANLDKVPEA----MRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD-----IKAQWGTLDEFKNEFANKATTLFGSGWTWLVVND--GKLEIVTTPNQDNPLTEGKT--PILLFDVWEHAYYLKYQ 172          
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM_MYCCH (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium chelonae GN=sodA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.308e-23
Identity = 59/142 (41.55%), Postives = 81/142 (57.04%), Query Frame = 3
Query:   54 HQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHA 479
            H KHH AYV   N AV +L +A  K D + +   +  + F+ GGHVNHSI+WKNL+P    GG+ P   L  AID  FGS +    + +A    LQGSGW  LG D+  ++L+     +Q   V     ++PLL +D+WEHA
Sbjct:    2 HSKHHAAYVAGVNSAVAKLEEAREKGDHAAIFLNEKNLAFHLGGHVNHSIWWKNLSP---NGGDKPTGDLAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLGQKLLTFQLYDQQANVPLG--IIPLLQVDMWEHA 138          
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODF_METTM (Superoxide dismutase [Fe] OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=sod PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.972e-23
Identity = 60/164 (36.59%), Postives = 83/164 (50.61%), Query Frame = 3
Query:    6 YSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYR 497
            Y ALEP IS E +++HH+KHHQAYV   N  + +L  A    +   +      + F+ GG+V H  FW N+ P  E GGE P   L   I+  FGS +   ++ S    + +GSGW  L       RL +      +  V   P    L+ +DVWEHAYY+ YR
Sbjct:   15 YDALEPYISEEQLRIHHEKHHQAYVDGANGVLRKLDDARENGEEVDIKAALKELSFHVGGYVLHLFFWGNMGPADECGGE-PDGRLAEYIEKDFGSFQRFKKEFSQAAVSAEGSGWAVLTYCQRTDRLFIMQVEKHN--VNVIPHFRILMVLDVWEHAYYIDYR 175          
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM_MYCCE (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium celatum GN=sodA PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.493e-23
Identity = 61/146 (41.78%), Postives = 82/146 (56.16%), Query Frame = 3
Query:   51 HHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD---PLVTKAPTLVPLLGIDVWEHA 479
            HH KHH  YV   N A+E+L +A  K D STV+  +  + FN  GHVNH+I+WKNL+P    GG+ P   L  AID  FGS +    +  A    +QGSGW  LG D   ++L++    +     PL      +VPLL +D+WEHA
Sbjct:    1 HHSKHHATYVKGANDALEKLEEARAKDDQSTVLLNEKNLAFNLAGHVNHTIWWKNLSP---NGGDKPTGELAAAIDDAFGSFDKFRAQFHAAATTVQGSGWAALGWDNLGEKLLIFQVYDHQSNFPL-----GVVPLLLLDMWEHA 138          
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM_BORBU (Superoxide dismutase [Fe] OS=Borrelia burgdorferi GN=sod PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 8.481e-23
Identity = 59/173 (34.10%), Postives = 91/173 (52.60%), Query Frame = 3
Query:    3 DYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV--------QLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYR 497
            DY A+EP I  + M++HH KHH  +V N N  +E++ + ++  D S ++        + Q  I+ N GG+ NH+++++ L P   G  +         I+  FGSL+ L   +      + GSGW WL L  E    V+       PL+    +  P+LGIDVWEHAYYL+Y+
Sbjct:   10 DYDAVEPYIDAKTMEIHHSKHHNGFVMNLNSILEKMGK-IHLTDVSNILKNIHDFPEEFQTLIRNNAGGYSNHTLYFRTLRP---GNKDNLFEKFKDDINAAFGSLDVLKANLKDTAMKIFGSGWAWLVLCPESGLKVISMPNQDSPLMN---SYKPILGIDVWEHAYYLKYQ 175          
The following BLAST results are available for this feature:
BLAST of EG358315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
SODM2_STAAR1.002e-2337.36Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus a... [more]
SODM2_STAAN1.002e-2337.36Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus a... [more]
SODM2_STAAM1.002e-2337.36Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus a... [more]
SODM2_STAAC1.002e-2337.36Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus a... [more]
SODM2_STAA81.002e-2337.36Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus a... [more]
SODM2_STAA31.002e-2337.36Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus a... [more]
SODM_MYCCH1.308e-2341.55Superoxide dismutase [Mn] (Fragment) OS=Mycobacter... [more]
SODF_METTM4.972e-2336.59Superoxide dismutase [Fe] OS=Methanobacterium ther... [more]
SODM_MYCCE6.493e-2341.78Superoxide dismutase [Mn] (Fragment) OS=Mycobacter... [more]
SODM_BORBU8.481e-2334.10Superoxide dismutase [Fe] OS=Borrelia burgdorferi ... [more]

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Properties
Property NameValue
Genbank description10f2 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010f2, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358315 ID=EG358315; Name=EG358315; organism=Citrus sinensis; type=EST; length=573bp
ACGATTACAGCGCTTTGGAGCCGGCGATTAGCGGAGAGATTATGCAGCTT
CATCACCAGAAGCATCACCAGGCTTACGTTACTAACTACAACAAGGCGGT
CGAGCAGCTTTTTCAAGCTTTGAACAAAGTCGACACTTCCACCGTCGTCC
AGTTGCAGGGCGCTATCAAGTTCAACGGCGGAGGTCATGTCAACCACTCA
ATTTTCTGGAAGAATCTTGCTCCTGTTCACGAAGGAGGTGGCGAGCCACC
ACATAGTTCCCTTGGTTGGGCTATTGACACGCATTTTGGTTCTCTGGAAG
CATTGATACAAAAGATGAGTGCTGAGGGTGCAGCTTTGCAGGGCTCTGGA
TGGGTGTGGCTTGGTTTAGATACAGAGTTTAAAAGGCTTGTGGTTGAAAC
TACTGCAAATCAGGATCCACTGGTGACTAAAGCCCCAACTCTGGTTCCTT
TGCTTGGTATAGATGTTTGGGAGCATGCATACTACCTACAGTACAGAGTA
AACAGCAGCAGTATTGGGGTGTATGTAATAAGAAATGTTGTTGTAAAATG
AATTTGATGTAATGACTCTACTG
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