EG358315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM2_STAAR (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain MRSA252) GN=sodM PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.002e-23 Identity = 65/174 (37.36%), Postives = 92/174 (52.87%), Query Frame = 3 Query: 6 YSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE----------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYR 497 Y ALEP I M+ HH KHH YVT N VE + L+KV + ++ +++ NGGGH NHS+FW+ L+P E G I +G+L+ + + + L GSGW WL ++ +L + TT NQD +T+ T P+L DVWEHAYYL+Y+ Sbjct: 12 YDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTELEHQSLADMIANLDKVPEA----MRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD-----IKAQWGTLDEFKNEFANKATTLFGSGWTWLVVND--GKLEIVTTPNQDNPLTEGKT--PILLFDVWEHAYYLKYQ 172
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM2_STAAN (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain N315) GN=sodM PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.002e-23 Identity = 65/174 (37.36%), Postives = 92/174 (52.87%), Query Frame = 3 Query: 6 YSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE----------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYR 497 Y ALEP I M+ HH KHH YVT N VE + L+KV + ++ +++ NGGGH NHS+FW+ L+P E G I +G+L+ + + + L GSGW WL ++ +L + TT NQD +T+ T P+L DVWEHAYYL+Y+ Sbjct: 12 YDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTELEHQSLADMIANLDKVPEA----MRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD-----IKAQWGTLDEFKNEFANKATTLFGSGWTWLVVND--GKLEIVTTPNQDNPLTEGKT--PILLFDVWEHAYYLKYQ 172
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM2_STAAM (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=sodM PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.002e-23 Identity = 65/174 (37.36%), Postives = 92/174 (52.87%), Query Frame = 3 Query: 6 YSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE----------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYR 497 Y ALEP I M+ HH KHH YVT N VE + L+KV + ++ +++ NGGGH NHS+FW+ L+P E G I +G+L+ + + + L GSGW WL ++ +L + TT NQD +T+ T P+L DVWEHAYYL+Y+ Sbjct: 12 YDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTELEHQSLADMIANLDKVPEA----MRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD-----IKAQWGTLDEFKNEFANKATTLFGSGWTWLVVND--GKLEIVTTPNQDNPLTEGKT--PILLFDVWEHAYYLKYQ 172
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM2_STAAC (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain COL) GN=sodM PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.002e-23 Identity = 65/174 (37.36%), Postives = 92/174 (52.87%), Query Frame = 3 Query: 6 YSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE----------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYR 497 Y ALEP I M+ HH KHH YVT N VE + L+KV + ++ +++ NGGGH NHS+FW+ L+P E G I +G+L+ + + + L GSGW WL ++ +L + TT NQD +T+ T P+L DVWEHAYYL+Y+ Sbjct: 12 YDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTELEHQSLADMIANLDKVPEA----MRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD-----IKAQWGTLDEFKNEFANKATTLFGSGWTWLVVND--GKLEIVTTPNQDNPLTEGKT--PILLFDVWEHAYYLKYQ 172
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM2_STAA8 (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain NCTC 8325) GN=sodM PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.002e-23 Identity = 65/174 (37.36%), Postives = 92/174 (52.87%), Query Frame = 3 Query: 6 YSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE----------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYR 497 Y ALEP I M+ HH KHH YVT N VE + L+KV + ++ +++ NGGGH NHS+FW+ L+P E G I +G+L+ + + + L GSGW WL ++ +L + TT NQD +T+ T P+L DVWEHAYYL+Y+ Sbjct: 12 YDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTELEHQSLADMIANLDKVPEA----MRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD-----IKAQWGTLDEFKNEFANKATTLFGSGWTWLVVND--GKLEIVTTPNQDNPLTEGKT--PILLFDVWEHAYYLKYQ 172
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM2_STAA3 (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain USA300) GN=sodM PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.002e-23 Identity = 65/174 (37.36%), Postives = 92/174 (52.87%), Query Frame = 3 Query: 6 YSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE----------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYR 497 Y ALEP I M+ HH KHH YVT N VE + L+KV + ++ +++ NGGGH NHS+FW+ L+P E G I +G+L+ + + + L GSGW WL ++ +L + TT NQD +T+ T P+L DVWEHAYYL+Y+ Sbjct: 12 YDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTELEHQSLADMIANLDKVPEA----MRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD-----IKAQWGTLDEFKNEFANKATTLFGSGWTWLVVND--GKLEIVTTPNQDNPLTEGKT--PILLFDVWEHAYYLKYQ 172
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM_MYCCH (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium chelonae GN=sodA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.308e-23 Identity = 59/142 (41.55%), Postives = 81/142 (57.04%), Query Frame = 3 Query: 54 HQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHA 479 H KHH AYV N AV +L +A K D + + + + F+ GGHVNHSI+WKNL+P GG+ P L AID FGS + + +A LQGSGW LG D+ ++L+ +Q V ++PLL +D+WEHA Sbjct: 2 HSKHHAAYVAGVNSAVAKLEEAREKGDHAAIFLNEKNLAFHLGGHVNHSIWWKNLSP---NGGDKPTGDLAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLGQKLLTFQLYDQQANVPLG--IIPLLQVDMWEHA 138
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODF_METTM (Superoxide dismutase [Fe] OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=sod PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 4.972e-23 Identity = 60/164 (36.59%), Postives = 83/164 (50.61%), Query Frame = 3 Query: 6 YSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYR 497 Y ALEP IS E +++HH+KHHQAYV N + +L A + + + F+ GG+V H FW N+ P E GGE P L I+ FGS + ++ S + +GSGW L RL + + V P L+ +DVWEHAYY+ YR Sbjct: 15 YDALEPYISEEQLRIHHEKHHQAYVDGANGVLRKLDDARENGEEVDIKAALKELSFHVGGYVLHLFFWGNMGPADECGGE-PDGRLAEYIEKDFGSFQRFKKEFSQAAVSAEGSGWAVLTYCQRTDRLFIMQVEKHN--VNVIPHFRILMVLDVWEHAYYIDYR 175
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM_MYCCE (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium celatum GN=sodA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 6.493e-23 Identity = 61/146 (41.78%), Postives = 82/146 (56.16%), Query Frame = 3 Query: 51 HHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD---PLVTKAPTLVPLLGIDVWEHA 479 HH KHH YV N A+E+L +A K D STV+ + + FN GHVNH+I+WKNL+P GG+ P L AID FGS + + A +QGSGW LG D ++L++ + PL +VPLL +D+WEHA Sbjct: 1 HHSKHHATYVKGANDALEKLEEARAKDDQSTVLLNEKNLAFNLAGHVNHTIWWKNLSP---NGGDKPTGELAAAIDDAFGSFDKFRAQFHAAATTVQGSGWAALGWDNLGEKLLIFQVYDHQSNFPL-----GVVPLLLLDMWEHA 138
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM_BORBU (Superoxide dismutase [Fe] OS=Borrelia burgdorferi GN=sod PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.481e-23 Identity = 59/173 (34.10%), Postives = 91/173 (52.60%), Query Frame = 3 Query: 3 DYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV--------QLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYR 497 DY A+EP I + M++HH KHH +V N N +E++ + ++ D S ++ + Q I+ N GG+ NH+++++ L P G + I+ FGSL+ L + + GSGW WL L E V+ PL+ + P+LGIDVWEHAYYL+Y+ Sbjct: 10 DYDAVEPYIDAKTMEIHHSKHHNGFVMNLNSILEKMGK-IHLTDVSNILKNIHDFPEEFQTLIRNNAGGYSNHTLYFRTLRP---GNKDNLFEKFKDDINAAFGSLDVLKANLKDTAMKIFGSGWAWLVLCPESGLKVISMPNQDSPLMN---SYKPILGIDVWEHAYYLKYQ 175 The following BLAST results are available for this feature:
BLAST of EG358315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >EG358315 ID=EG358315; Name=EG358315; organism=Citrus sinensis; type=EST; length=573bpback to top |