EG358315

Overview
NameEG358315
Unique NameEG358315
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length573
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM_BRAFL (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Branchiostoma floridae PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 6.463e-39
Identity = 85/147 (57.82%), Postives = 98/147 (66.67%), Query Frame = 3
Query:   27 ISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDV 467
            IS EIMQ+HHQKHH  YV N N A EQL +A++K D + ++ LQ AIKFNGGGH+NHSIFW NL P   GGGEP    L  AI   FGS EA  +KM+A   A+QGSGW WLGLD   K+L +    NQDPL      L PLLGIDV
Sbjct:    2 ISAEIMQVHHQKHHATYVNNLNAAEEQLAEAIHKQDVTKMIALQSAIKFNGGGHINHSIFWNNLCP--SGGGEPT-GPLAEAITRDFGSFEAFKEKMTAATVAVQGSGWGWLGLDPTSKKLRIVACPNQDPL-EGTTGLKPLLGIDV 144          
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM_EPTST (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Eptatretus stoutii PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.208e-38
Identity = 83/147 (56.46%), Postives = 99/147 (67.35%), Query Frame = 3
Query:   27 ISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDV 467
            IS EIMQLHH KHH AYV N N   E+L +AL K D +T V LQ A +FNGGGH+NHSIFW+NL+P   GGG+P    L  AI+  FGS++ L +K+ A    +QGSGW WLG + E KRL + T ANQDPL      L PLLGIDV
Sbjct:    2 ISAEIMQLHHSKHHAAYVNNVNVVEEKLAEALGKGDVNTQVSLQPAFRFNGGGHINHSIFWRNLSP--SGGGQPCGDLLK-AIENDFGSVDKLREKLVAAAVGVQGSGWAWLGFNKESKRLQIATCANQDPL-QGTTGLFPLLGIDV 144          
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM_DEBHA (Probable superoxide dismutase [Mn], mitochondrial OS=Debaryomyces hansenii GN=DEHA2E01232g PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.471e-38
Identity = 81/167 (48.50%), Postives = 111/167 (66.47%), Query Frame = 3
Query:    6 YSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHS--SLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTE-FKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYR 497
            Y +LEP ISG+I ++HH+KHHQ YV  YN A+EQL +A ++ D    + +Q  IKF+GGGH NH +FWK+LAP  + GG+ P S  +LG  I   +GS++ LI   +A+ A++QGSGW ++  + +    L V TT NQD   T    LVPL+ ID WEHAYYLQY+
Sbjct:   21 YDSLEPYISGKINEIHHKKHHQTYVNGYNSAIEQLIEAESQGDVKKAIVIQQNIKFHGGGHTNHVLFWKSLAPNSQNGGKHPGSDTNLGKKIIEQYGSIDNLISITNAKLASIQGSGWAFIVKNKQNGGNLDVVTTYNQD---TVTDPLVPLIAIDAWEHAYYLQYQ 184          
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM_PETMA (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Petromyzon marinus PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.079e-37
Identity = 84/148 (56.76%), Postives = 98/148 (66.22%), Query Frame = 3
Query:   27 ISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDV 467
            IS  IMQLHH KHH  YV N N A ++L +A+ K D +  + LQ AIKFNGGGH+NHSIFW NL+P    GG  P   L  AI+T FGS   L +KMSA   A+QGSGW WLG D E  RL +   ANQDPL  +A T L+PLLGIDV
Sbjct:    2 ISANIMQLHHSKHHATYVNNLNVAEQKLAEAVAKGDVTAEIALQPAIKFNGGGHINHSIFWTNLSP---NGGGAPTGDLQKAIETDFGSFTKLQEKMSAVSVAVQGSGWGWLGYDKETGRLRIAACANQDPL--QATTGLIPLLGIDV 144          
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM_YEAST (Superoxide dismutase [Mn], mitochondrial OS=Saccharomyces cerevisiae GN=SOD2 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.715e-37
Identity = 88/189 (46.56%), Postives = 118/189 (62.43%), Query Frame = 3
Query:    3 DYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKV--------DTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLD-TEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYRVNSSSIGVYVIRNVV 542
            D+ ALEP ISG+I +LH+ KHHQ YV  +N AV+Q FQ L+ +        +   ++ +Q  IKF+GGG  NH +FW+NLAP  +GGGEPP  +L  AID  FGSL+ LI+  + + A +QGSGW ++  + +   +L V  T NQD   T    LVPL+ ID WEHAYYLQY+ N  +     I NVV
Sbjct:   36 DFGALEPYISGQINELHYTKHHQTYVNGFNTAVDQ-FQELSDLLAKEPSPANARKMIAIQQNIKFHGGGFTNHCLFWENLAPESQGGGEPPTGALAKAIDEQFGSLDELIKLTNTKLAGVQGSGWAFIVKNLSNGGKLDVVQTYNQD---TVTGPLVPLVAIDAWEHAYYLQYQ-NKKADYFKAIWNVV 219          
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM_PENCH (Superoxide dismutase [Mn], mitochondrial OS=Penicillium chrysogenum GN=SOD PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.715e-37
Identity = 84/173 (48.55%), Postives = 108/173 (62.43%), Query Frame = 3
Query:    6 YSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNL----APVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFK-RLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYRVNSS 509
            Y ALEP IS +IM+LHHQKHHQ Y+ N N A+     A    D  T++ LQ  ++FNGGGH+NHS+FWKNL     P ++  G P   +L  AI + +GS EA ++   AE   LQGSGW WL      K RL + TT +QDP+   AP  VP+ G+D+WEHAYYLQY  N +
Sbjct:   15 YDALEPVISKQIMELHHQKHHQTYINNLNAALSAQASATASNDVPTLISLQQKLRFNGGGHINHSLFWKNLTPPGTPANDIAGAP---ALREAIVSRWGSHEAFVKAFGAELLGLQGSGWGWLVSKGGAKGRLEIVTTKDQDPV--NAPD-VPVFGVDMWEHAYYLQYLNNKA 181          
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM_ASPFU (Superoxide dismutase [Mn], mitochondrial OS=Aspergillus fumigatus GN=sodB PE=1 SV=3)

HSP 1 Score: 154.836 bits (390), Expect = 2.715e-37
Identity = 79/170 (46.47%), Postives = 105/170 (61.76%), Query Frame = 3
Query:    6 YSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSS-LGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYRVNSSS 512
            Y AL+P IS +IM+LHH+KHHQ YV   N A+E   +A    D   +V +Q AIKFNGGGH+NHS+FWKNLAP   GGG+   +  L  AI+  +GS +      +     +QGSGW WL  D    +L + TT +QDP+   A    P+ G+D+WEHAYYLQY  + +S
Sbjct:   14 YDALQPYISQQIMELHHKKHHQTYVNGLNAALEAQKKAAEANDVPKLVSVQQAIKFNGGGHINHSLFWKNLAPEKSGGGKIDQAPVLKAAIEQRWGSFDKFKDAFNTTLLGIQGSGWGWLVTDGPKGKLDITTTHDQDPVTGAA----PVFGVDMWEHAYYLQYLNDKAS 179          
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM_GLOMM (Superoxide dismutase [Mn], mitochondrial OS=Glossina morsitans morsitans GN=Sod2 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 7.901e-37
Identity = 77/165 (46.67%), Postives = 102/165 (61.82%), Query Frame = 3
Query:    3 DYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYR 497
            DY AL P IS +I+++HH KHHQ YV N N   EQ+ +A +K D + VV+L     FN GGH+NHSI+W+NL+P        P + L  AI+  F S E   + +SA    +QGSGW WLG + + K+L +   +NQ+PL      LVPL  IDVWEHAYYLQ +
Sbjct:   28 DYGALAPIISKDILEVHHGKHHQTYVNNLNAVEEQMTEAHSKKDVNKVVELSKNYAFNWGGHLNHSIYWQNLSPTK----SEPSADLKKAIEEQFSSFEQFKKDLSALSIGVQGSGWGWLGYNKKXKKLQILAVSNQEPL-QAVTGLVPLFAIDVWEHAYYLQXK 187          
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM_ASPOR (Superoxide dismutase [Mn], mitochondrial OS=Aspergillus oryzae GN=sodB PE=3 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 7.901e-37
Identity = 81/181 (44.75%), Postives = 109/181 (60.22%), Query Frame = 3
Query:    6 YSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAP--VHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYRVNSSSI--GVYVIRN 536
            Y ALEP I  +IM++HHQKHHQ Y+TN N A+     AL   +   ++ LQ  IKFNGGGH+NHS+FWKNLAP    E   +     L  AI+  +GS+E   +   A    LQGSGW WL  +    +L + +T +QDP+  K    VP+ G+D+WEHAYYLQY  N +S   G++ + N
Sbjct:   14 YDALEPVICKQIMEIHHQKHHQTYITNLNAALSAQSTALAANNIPQLINLQQKIKFNGGGHINHSLFWKNLAPHASPETNIDQAAPVLKAAIEAQYGSVEKFKEAFGATLLGLQGSGWGWLVANGPGGKLEIVSTKDQDPVTDK----VPVFGVDMWEHAYYLQYFNNKASYVEGIWKVLN 190          
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM_NEUCR (Superoxide dismutase [Mn], mitochondrial OS=Neurospora crassa GN=sod-2 PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.921e-36
Identity = 81/167 (48.50%), Postives = 103/167 (61.68%), Query Frame = 3
Query:    6 YSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVH--EGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDT--EFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQY 494
            Y+ALEP IS +IM+LHH KHHQ YVTN N A++    A+   D    +  Q AIKFNGGGH+NHS+FWKNLAP    E        SL   I+  +GS +   +  SA    +QGSGW WL  ++  E  RL + TT +QDP+V      VP+ G+D+WEHAYYLQY
Sbjct:   43 YNALEPYISAQIMELHHSKHHQTYVTNLNNALKVHVAAIASSDIPAQIAQQPAIKFNGGGHINHSLFWKNLAPAETPETNYSKAAPSLAAEIEKTWGSFDEFKKAFSAALLGIQGSGWGWLVKESTAEKGRLRIITTKDQDPVVGGE---VPVFGVDMWEHAYYLQY 206          
The following BLAST results are available for this feature:
BLAST of EG358315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
SODM_BRAFL6.463e-3957.82Superoxide dismutase [Mn], mitochondrial (Fragment... [more]
SODM_EPTST3.208e-3856.46Superoxide dismutase [Mn], mitochondrial (Fragment... [more]
SODM_DEBHA5.471e-3848.50Probable superoxide dismutase [Mn], mitochondrial ... [more]
SODM_PETMA2.079e-3756.76Superoxide dismutase [Mn], mitochondrial (Fragment... [more]
SODM_YEAST2.715e-3746.56Superoxide dismutase [Mn], mitochondrial OS=Saccha... [more]
SODM_PENCH2.715e-3748.55Superoxide dismutase [Mn], mitochondrial OS=Penici... [more]
SODM_ASPFU2.715e-3746.47Superoxide dismutase [Mn], mitochondrial OS=Asperg... [more]
SODM_GLOMM7.901e-3746.67Superoxide dismutase [Mn], mitochondrial OS=Glossi... [more]
SODM_ASPOR7.901e-3744.75Superoxide dismutase [Mn], mitochondrial OS=Asperg... [more]
SODM_NEUCR3.921e-3648.50Superoxide dismutase [Mn], mitochondrial OS=Neuros... [more]

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Properties
Property NameValue
Genbank description10f2 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010f2, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358315 ID=EG358315; Name=EG358315; organism=Citrus sinensis; type=EST; length=573bp
ACGATTACAGCGCTTTGGAGCCGGCGATTAGCGGAGAGATTATGCAGCTT
CATCACCAGAAGCATCACCAGGCTTACGTTACTAACTACAACAAGGCGGT
CGAGCAGCTTTTTCAAGCTTTGAACAAAGTCGACACTTCCACCGTCGTCC
AGTTGCAGGGCGCTATCAAGTTCAACGGCGGAGGTCATGTCAACCACTCA
ATTTTCTGGAAGAATCTTGCTCCTGTTCACGAAGGAGGTGGCGAGCCACC
ACATAGTTCCCTTGGTTGGGCTATTGACACGCATTTTGGTTCTCTGGAAG
CATTGATACAAAAGATGAGTGCTGAGGGTGCAGCTTTGCAGGGCTCTGGA
TGGGTGTGGCTTGGTTTAGATACAGAGTTTAAAAGGCTTGTGGTTGAAAC
TACTGCAAATCAGGATCCACTGGTGACTAAAGCCCCAACTCTGGTTCCTT
TGCTTGGTATAGATGTTTGGGAGCATGCATACTACCTACAGTACAGAGTA
AACAGCAGCAGTATTGGGGTGTATGTAATAAGAAATGTTGTTGTAAAATG
AATTTGATGTAATGACTCTACTG
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