EG358315

Overview
NameEG358315
Unique NameEG358315
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length573
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM_AGABI (Superoxide dismutase [Mn], mitochondrial OS=Agaricus bisporus GN=sod PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.034e-28
Identity = 70/165 (42.42%), Postives = 96/165 (58.18%), Query Frame = 3
Query:    6 YSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKF--NGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQY 494
            Y ALEP IS +IM+LHH+K              Q  +   +  T+ V     ++ F     GH+NHS+FW+NLAP    GG+     L  AID  FG L+ L ++ +   A +QGSGW WLG++   KRL + TT NQDPL+     LVP++G+D+WEHA+YLQY
Sbjct:   12 YDALEPYISRQIMELHHKKTSSDLCE-----CAQHCRGCLRHSTAVVGGFDLSLFFILTTLGHINHSLFWQNLAPAAGAGGQLKPGPLKDAIDQTFGGLDNLKKEFNTTTAGIQGSGWGWLGVNPSNKRLEISTTPNQDPLL----NLVPIIGVDIWEHAFYLQY 167          
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM_ACIAD (Superoxide dismutase [Mn] OS=Acinetobacter sp. (strain ADP1) GN=sodA PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.034e-28
Identity = 74/172 (43.02%), Postives = 106/172 (61.63%), Query Frame = 3
Query:    9 SALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQ-------GAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPTL-VPLLGIDVWEHAYYLQYR 497
            +AL+PAI  + M++H+ KHH+AYV N N  + + +  L+K D   ++QLQ        A++ NGGGH NH+ FW++LA  ++ G   P  +L   I   FGSL+A  QK +   +   GSGW WL + T   +L V +T NQD PL+  + T   PLLG+DVWEHAYYL+Y+
Sbjct:   35 NALQPAIDQQTMEIHYGKHHKAYVDNLNAQI-KTYPELDKTD---LIQLQKQISKYNTAVRNNGGGHFNHTFFWESLAATNKTG--QPSPALVKQITQDFGSLDAFKQKFNEAASGRFGSGWAWL-IVTPNGKLAVTSTPNQDNPLMDLSETKGTPLLGLDVWEHAYYLKYQ 199          
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM_LACLM (Superoxide dismutase [Mn] OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=sodA PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.351e-28
Identity = 72/169 (42.60%), Postives = 99/169 (58.58%), Query Frame = 3
Query:    9 SALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQ----ALNKV--DTSTVVQ-LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQY 494
            +ALEP      M+LHH KHHQ YV N N A+E+  +    +L ++  D S + + ++ A++ NGGGH+NHS FW  L P  +G        +G AI   FGS E    +  A      GSGW WL +D E  +L V +TANQD  +++   L P+LG+DVWEHAYYL+Y
Sbjct:   13 NALEPFFDEATMRLHHGKHHQTYVNNLNAAIEKHNELDDLSLEELLTDLSAIPEDIRTAVRNNGGGHLNHSQFWLWLRPNTDGSENHADGEIGDAIAKEFGSFETFKTEFKAAATGRFGSGWAWLVVD-EAGKLKVVSTANQDNPISEG--LTPVLGLDVWEHAYYLKY 178          
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM_LACLA (Superoxide dismutase [Mn] OS=Lactococcus lactis subsp. lactis GN=sodA PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.351e-28
Identity = 72/169 (42.60%), Postives = 99/169 (58.58%), Query Frame = 3
Query:    9 SALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQ----ALNKV--DTSTVVQ-LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQY 494
            +ALEP      M+LHH KHHQ YV N N A+E+  +    +L ++  D S + + ++ A++ NGGGH+NHS FW  L P  +G        +G AI   FGS E    +  A      GSGW WL +D E  +L V +TANQD  +++   L P+LG+DVWEHAYYL+Y
Sbjct:   13 NALEPFFDEATMRLHHGKHHQTYVNNLNAAIEKHNELDDLSLEELLTDLSAIPEDIRTAVRNNGGGHLNHSQFWLWLRPNTDGSENHADGEIGDAIAKEFGSFETFKTEFKAAATGRFGSGWAWLVVD-EAGKLKVVSTANQDNPISEG--LTPVLGLDVWEHAYYLKY 178          
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM_STAEP (Superoxide dismutase [Mn/Fe] OS=Staphylococcus epidermidis GN=sodA PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.764e-28
Identity = 70/174 (40.23%), Postives = 101/174 (58.05%), Query Frame = 3
Query:    6 YSALEPAISGEIMQLHHQKHHQAYVTNYN----------KAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYR 497
            + ALEP I  E M++HH KHH  YVT  N          K++E++   L+ V +     +Q A++ NGGGH+NHS+FW+ L P  E  GE         I   +GSL+   ++ + + AA  GSGW WL ++    +L + TT NQD  +T+  T  P+LG+DVWEHAYYL+Y+
Sbjct:   12 FDALEPHIDKETMEIHHDKHHNTYVTKLNAVVEGTDLEAKSIEEIVANLDSVPS----DIQTAVRNNGGGHLNHSLFWELLTPNSEEKGEVVEK-----IKEQWGSLDEFKKEFADKAAARFGSGWAWLVVNN--GQLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQ 172          
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM_KLEPL (Superoxide dismutase [Fe] (Fragment) OS=Klebsiella planticola GN=sodA PE=1 SV=3)

HSP 1 Score: 125.561 bits (314), Expect = 1.764e-28
Identity = 68/166 (40.96%), Postives = 92/166 (55.42%), Query Frame = 3
Query:    6 YSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVD------TSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 485
            Y ALEP I  +  ++HH KHH  YVTN N AVE    A   ++       +     Q A++ NGGGH NH++FW+ +AP   GG   P   +  AID  FGS +A  ++ +       GSGW WL +D +   + V +T NQD  V +  T  P+LG+DVWEHAYY
Sbjct:   12 YDALEPHIDAKTXEIHHSKHHNTYVTNLNAAVEGTEFADKDINDLIAMLDALPADKQTAVRNNGGGHANHTLFWEVIAP---GGSNTPVGEVAKAIDAKFGSFDAFKEEFAKAATTRFGSGWAWLIVDGD--SVAVTSTPNQDSPVMEGKT--PVLGLDVWEHAYY 170          
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM_STACA (Superoxide dismutase [Mn/Fe] OS=Staphylococcus carnosus GN=sodA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.009e-28
Identity = 69/172 (40.12%), Postives = 101/172 (58.72%), Query Frame = 3
Query:    3 DYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE-------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYR 497
            ++ ALEP I  E M++HH KHH  YVT  N A+E        + + +  +D S    +Q A++ NGGGH+NHS+FW+ L P  E  G     ++   I   +GSL+    + + + A   GSGW WL +D + K L + +T NQD  +T+  T  P+LG+DVWEHAYYL+Y+
Sbjct:   11 EFDALEPYIDKETMEIHHDKHHNTYVTKLNAAIEGTDLENKSIEEIVANLD-SVPSDIQTAVRNNGGGHLNHSLFWQLLTPNSEEKG-----TVIDKIKEEWGSLDKFKDEFAKKAAGQFGSGWAWLVVDKDGK-LEIVSTPNQDNPITEGKT--PILGLDVWEHAYYLKYQ 173          
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM_ENTFA (Superoxide dismutase [Fe] OS=Enterococcus faecalis GN=sodA PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 3.930e-28
Identity = 70/175 (40.00%), Postives = 95/175 (54.29%), Query Frame = 3
Query:    6 YSALEPAISGEIMQLHHQKHHQAYVTNYN-----------KAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYR 497
            Y ALEP I  E M LHH KHH  YVTN N           K+VE L   +N +       ++ A++ NGGGH NH+ FW+ +AP    GG+P   ++  AID  FGS + +            GSGW WL ++    +L + +T NQD  +    T  P+LG+DVWEHAYYL+Y+
Sbjct:   12 YDALEPYIDVETMHLHHDKHHNTYVTNLNAAIEKHPELGEKSVENLISDMNAIPE----DIRTAVRNNGGGHANHTFFWEIMAP--NAGGQPT-GAIKEAIDETFGSFDEMKAAFKTAATGRFGSGWAWLVVNN--GKLEITSTPNQDSPLMDGQT--PVLGLDVWEHAYYLKYK 175          
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM_STAXY (Superoxide dismutase [Mn/Fe] OS=Staphylococcus xylosus GN=sodA PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.133e-28
Identity = 69/170 (40.59%), Postives = 98/170 (57.65%), Query Frame = 3
Query:    6 YSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVD------TSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYR 497
            + ALEP I  + M++HH KHH  YVT  N AVE        ++       S    +Q A++ NGGGH+NHS+FW+ L P  E  G     ++   I   +GSL+A  ++ + + AA  GSGW WL ++     L + TT NQD  +T+  T  P+LG+DVWEHAYYL+Y+
Sbjct:   12 FDALEPHIDQQTMEIHHGKHHNTYVTKLNAAVEGTDLESKSIEEIVANLDSVPENIQTAVRNNGGGHLNHSLFWELLTPNSEEKG-----TVVDKIKEQWGSLDAFKEEFADKAAARFGSGWAWLVVNN--GNLEIVTTPNQDNPITEGKT--PILGLDVWEHAYYLKYQ 172          
BLAST of EG358315 vs. ExPASy Swiss-Prot
Match: SODM_STAS1 (Superoxide dismutase [Mn/Fe] OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=sodA PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.133e-28
Identity = 69/170 (40.59%), Postives = 98/170 (57.65%), Query Frame = 3
Query:    6 YSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVD------TSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYR 497
            + ALEP I  + M++HH KHH  YVT  N AVE        ++       S    +Q A++ NGGGH+NHS+FW+ L P  E  G     ++   I   +GSL+A  ++ + + AA  GSGW WL ++     L + TT NQD  +T+  T  P+LG+DVWEHAYYL+Y+
Sbjct:   12 FDALEPHIDKQTMEIHHDKHHNTYVTKLNAAVEGTDLESKSIEEIVANLDSVPENIQTAVRNNGGGHLNHSLFWELLTPNSEEKG-----TVVDKIKEQWGSLDAFKEEFADKAAARFGSGWAWLVVNN--GNLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQ 172          
The following BLAST results are available for this feature:
BLAST of EG358315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
SODM_AGABI1.034e-2842.42Superoxide dismutase [Mn], mitochondrial OS=Agaric... [more]
SODM_ACIAD1.034e-2843.02Superoxide dismutase [Mn] OS=Acinetobacter sp. (st... [more]
SODM_LACLM1.351e-2842.60Superoxide dismutase [Mn] OS=Lactococcus lactis su... [more]
SODM_LACLA1.351e-2842.60Superoxide dismutase [Mn] OS=Lactococcus lactis su... [more]
SODM_STAEP1.764e-2840.23Superoxide dismutase [Mn/Fe] OS=Staphylococcus epi... [more]
SODM_KLEPL1.764e-2840.96Superoxide dismutase [Fe] (Fragment) OS=Klebsiella... [more]
SODM_STACA3.009e-2840.12Superoxide dismutase [Mn/Fe] OS=Staphylococcus car... [more]
SODM_ENTFA3.930e-2840.00Superoxide dismutase [Fe] OS=Enterococcus faecalis... [more]
SODM_STAXY5.133e-2840.59Superoxide dismutase [Mn/Fe] OS=Staphylococcus xyl... [more]
SODM_STAS15.133e-2840.59Superoxide dismutase [Mn/Fe] OS=Staphylococcus sap... [more]

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Properties
Property NameValue
Genbank description10f2 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010f2, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358315 ID=EG358315; Name=EG358315; organism=Citrus sinensis; type=EST; length=573bp
ACGATTACAGCGCTTTGGAGCCGGCGATTAGCGGAGAGATTATGCAGCTT
CATCACCAGAAGCATCACCAGGCTTACGTTACTAACTACAACAAGGCGGT
CGAGCAGCTTTTTCAAGCTTTGAACAAAGTCGACACTTCCACCGTCGTCC
AGTTGCAGGGCGCTATCAAGTTCAACGGCGGAGGTCATGTCAACCACTCA
ATTTTCTGGAAGAATCTTGCTCCTGTTCACGAAGGAGGTGGCGAGCCACC
ACATAGTTCCCTTGGTTGGGCTATTGACACGCATTTTGGTTCTCTGGAAG
CATTGATACAAAAGATGAGTGCTGAGGGTGCAGCTTTGCAGGGCTCTGGA
TGGGTGTGGCTTGGTTTAGATACAGAGTTTAAAAGGCTTGTGGTTGAAAC
TACTGCAAATCAGGATCCACTGGTGACTAAAGCCCCAACTCTGGTTCCTT
TGCTTGGTATAGATGTTTGGGAGCATGCATACTACCTACAGTACAGAGTA
AACAGCAGCAGTATTGGGGTGTATGTAATAAGAAATGTTGTTGTAAAATG
AATTTGATGTAATGACTCTACTG
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