EG358314

Overview
NameEG358314
Unique NameEG358314
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358314 vs. ExPASy Swiss-Prot
Match: YJ2D_SCHPO (Uncharacterized transporter C4B3.13 OS=Schizosaccharomyces pombe GN=SPCC4B3.13 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.463e-14
Identity = 52/188 (27.66%), Postives = 87/188 (46.28%), Query Frame = 3
Query:    3 FQILVLLAGLLPNPELALDSLSICMTISGWVFMISVGFNAAASVRVSNELGAANPKSASFSVVMVTLVSFVISVMAAIIILALRDVISYAFTGGEAVAAAVSDLCPLLALTLILNGIQPVLSGVAVGCGWQTFXXXXXXXXXXXXXXXXXSLLGFYFNLGAKGIWSGMIGGTVMQTLILIWVTFRTDW 566
            F+++   +G+L   ELA  S+S+  T S   + ++ G  AAA+ RV N +GA N K A  +  +   +   I V+ A+I+   R+  +Y FT  + V A V+ + PL+AL  I +  Q V  G+  G G Q                    +L F  + G  G+W G+    ++   +  W +   +W
Sbjct:  340 FELVTFASGVLGTTELA--SMSVLSTTSTLSYNLAFGVAAAAATRVGNLIGAGNTKLAKLATHVSINLGAAIGVIIAVILFLTRNTWTYIFTSDKDVVALVATIIPLVALINIADNTQCVAGGLLRGQGRQRIGGVVNFIAYYLLGLPVAIILCFKLDWGLYGLWIGIGAAILIIAGVETWCSLHVNW 525          
BLAST of EG358314 vs. ExPASy Swiss-Prot
Match: S47A2_HUMAN (Multidrug and toxin extrusion protein 2 OS=Homo sapiens GN=SLC47A2 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.351e-12
Identity = 53/189 (28.04%), Postives = 82/189 (43.39%), Query Frame = 3
Query:    3 FQILVLLAGLLPNPELALDSLSICMTISGWVFMISVGFNAAASVRVSNELGAANPKSASFSVVMVTLVSFVISVMAAIIILALRDVISYAFTGGEAVAAAVSDLCPLLALTLILNGIQPVLSGVAVGCGWQTFXXXXXXXXXXXXXXXXXSLLGFYFNLGAKGIWSGMIGGTVMQTLILIWVTFRTDWK 569
            ++I   L GLL   +L+  +  +   ++   +MI +G +    VRV   LGAA+   A  S V   L    IS++   +I  L++ + + FT  E V A VS + P+ ++  +   I  V  GV  G G Q F                  LL F   +   G+W GM+    + T   +  T R DWK
Sbjct:  309 YEIGSFLMGLLSVVDLSAQA--VIYEVATVTYMIPLGLSIGVCVRVGMALGAADTVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVFEAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFLATAAFVAYTARLDWK 495          
BLAST of EG358314 vs. ExPASy Swiss-Prot
Match: S47A2_PONAB (Multidrug and toxin extrusion protein 2 OS=Pongo abelii GN=SLC47A2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.678e-11
Identity = 47/159 (29.56%), Postives = 67/159 (42.14%), Query Frame = 3
Query:   93 VFMISVGFNAAASVRVSNELGAANPKSASFSVVMVTLVSFVISVMAAIIILALRDVISYAFTGGEAVAAAVSDLCPLLALTLILNGIQPVLSGVAVGCGWQTFXXXXXXXXXXXXXXXXXSLLGFYFNLGAKGIWSGMIGGTVMQTLILIWVTFRTDWK 569
            V  I +G +    VRV   LGAA+   A  S V   L    IS++   +I  L++ + + FT  E V A VS + P+ ++  +   I  V  GV  G G Q F                  LL F   +   G+W GM+    + T   +  T R DWK
Sbjct:  315 VARIPLGLSIGVCVRVGMALGAADTVQAKRSAVSGVLSIVGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVFEAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFLATAAFVAYTARLDWK 473          
BLAST of EG358314 vs. ExPASy Swiss-Prot
Match: S47A2_RABIT (Multidrug and toxin extrusion protein 2 OS=Oryctolagus cuniculus GN=SLC47A2 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.416e-11
Identity = 49/189 (25.93%), Postives = 80/189 (42.33%), Query Frame = 3
Query:    3 FQILVLLAGLLPNPELALDSLSICMTISGWVFMISVGFNAAASVRVSNELGAANPKSASFSVVMVTLVSFVISVMAAIIILALRDVISYAFTGGEAVAAAVSDLCPLLALTLILNGIQPVLSGVAVGCGWQTFXXXXXXXXXXXXXXXXXSLLGFYFNLGAKGIWSGMIGGTVMQTLILIWVTFRTDWK 569
            ++I   L GLL   +L+    +I   ++  V+MI +G   A  VRV   LGAA+   A  S V   L +   S++   ++  L   + Y FT  E V A V+ + P+  +  ++  +  V  GV  G G Q F                  +L F   +   G+W GM+    +  +  +    + DWK
Sbjct:  302 YEIGSFLMGLLGVVDLS--GQAIIYEVATVVYMIPMGLGMAVCVRVGTALGAADTLQAKRSAVSGLLCTAGTSLVVGTLLGLLNSQLGYIFTSDEEVIALVNQVLPIYIVFQLVEAVCCVFGGVLRGTGKQAFGAIVNAIMYYIVGLPLGIVLTFVVGMRIMGLWLGMLTCIFLAAVTFVVYAVQLDWK 488          
The following BLAST results are available for this feature:
BLAST of EG358314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
YJ2D_SCHPO2.463e-1427.66Uncharacterized transporter C4B3.13 OS=Schizosacch... [more]
S47A2_HUMAN1.351e-1228.04Multidrug and toxin extrusion protein 2 OS=Homo sa... [more]
S47A2_PONAB5.678e-1129.56Multidrug and toxin extrusion protein 2 OS=Pongo a... [more]
S47A2_RABIT7.416e-1125.93Multidrug and toxin extrusion protein 2 OS=Oryctol... [more]

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Properties
Property NameValue
Genbank description5b5 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0005b5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358314 ID=EG358314; Name=EG358314; organism=Citrus sinensis; type=EST; length=577bp
ACTTTCAGATTCTTGTTCTATTGGCTGGTTTGTTACCAAATCCGGAGTTG
GCTTTGGACTCTCTTTCCATTTGCATGACGATATCCGGATGGGTGTTTAT
GATATCGGTCGGGTTTAATGCAGCTGCTAGTGTTAGAGTCAGCAATGAGC
TAGGAGCGGCGAATCCAAAATCGGCGTCGTTTTCAGTGGTAATGGTGACG
TTAGTTTCCTTCGTGATCTCCGTGATGGCGGCGATAATCATTCTAGCCCT
ACGTGATGTCATCAGCTACGCCTTCACTGGAGGCGAAGCGGTTGCCGCAG
CCGTCTCCGACCTCTGTCCGCTTCTTGCTTTGACCCTGATTCTTAACGGC
ATCCAGCCTGTCTTGTCCGGTGTGGCTGTTGGGTGCGGATGGCAAACATT
TGTGGCGTATGTGAACGTGGGATGCTATTACGTCGTTGGGGTTCCAGTAG
GTTCACTTCTCGGTTTCTACTTCAATCTTGGTGCTAAGGGAATATGGTCT
GGGATGATTGGCGGCACGGTGATGCAAACTTTAATTCTGATATGGGTGAC
ATTTCGAACAGACTGGAAATAAAGANG
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