CX672037

Overview
NameCX672037
Unique NameCX672037
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672037 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.760e-22
Identity = 64/204 (31.37%), Postives = 103/204 (50.49%), Query Frame = 3
Query:  198 PVID---LACDDRSLIVQQVADACKNYGFFQAINHEVPLETVERVLEVAKEFFNLPVEEKLKLYSDDPSKTMRLSTSFNVNKEKVHNWRDYLRLHCYPLDKYVPEWPSNPSTFKEFVSTYCSEVRGLGYRVLELISESLGLEKDYIKKVLGEQGQHMA-----VNFYPPCPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLK 785
            PVI+   L   +R+  ++ + DAC+N+GFF+ +NH +P+E ++ V  + KE +   +E++ K       + M       V      +W     +   P+   + E P      ++ +  +  ++  L  +VL+L+ E+LGLEK Y+K         +      V+ YPPCP PEL  GL  HTD   L +L QD  VAGLQ+LK
Sbjct:    5 PVINMEKLEGQERAATMKLINDACENWGFFELVNHSIPVELMDEVERLTKEHYKKCMEQRFK-------ELMASKVEGAVVDANDMDWESTFFIRHLPVSN-LSEIPDLTDEHRKVMKEFAEKLEKLAEQVLDLLCENLGLEKGYLKMAFAGTTTGLPTFGTKVSNYPPCPRPELFKGLRAHTDAGGLILLFQDDRVAGLQLLK 200          
BLAST of CX672037 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.676e-21
Identity = 70/209 (33.49%), Postives = 110/209 (52.63%), Query Frame = 3
Query:  183 ECKNVPVIDLAC---DDRSLIVQQVADACKNYGFFQAINHEVPLETVERVLEVAKEFFNLPVEEKLKLYSDDPSKTMRLSTSFNVNKEKVHNWRDYLRLHCYPLDKYVPEWPSNPSTFKEFVSTYCSEVRGLGYRVLELISESLGLEKDYIKKVL--GEQGQHM---AVNFYPPCPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLK 785
            E  + PVI++       R   +  + DAC+N+GFF+ +NH +  E + RV  V KE +    E++ K ++   SKT  L +  NV+ + + +W     L   P    + + P      +  +  +  E+  L  R+L+L+ E LGLEK Y+K+V   G  G       V+ YPPCP+P+L  GL  HTD   + +L QD +V+GLQ+LK
Sbjct:    2 ESGSFPVINMELLQGSQRPAAMALLRDACENWGFFELLNHGISHELMNRVEAVNKEHYRRFREQRFKEFA---SKT--LDSVENVDPDNL-DWESTFFLRHLPTSN-ISQIPDLDDDCRATMKEFARELEKLAERLLDLLCEDLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK 203          
BLAST of CX672037 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.733e-21
Identity = 66/208 (31.73%), Postives = 111/208 (53.37%), Query Frame = 3
Query:  189 KNV--PVIDLAC---DDRSLIVQQVADACKNYGFFQAINHEVPLETVERVLEVAKEFFNLPVEEKLKLYSDDPSKTMRLSTSFNVNKEKVH-NWRDYLRLHCYPLDKYVPEWPSNPSTFKEFVSTYCSEVRGLGYRVLELISESLGLEKDYIKKVL-GEQGQHMA--VNFYPPCPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLK 785
            KN+  PV+DL+    ++R   +  + DAC+N+GFF+ +NH +P + ++   ++ KE + + +E+K     +D  K+  L    N+ +E    +W     L   P      + P     ++  +  +   +  L   +L+L+ E+LGLEK Y+KKV  G +G      V+ YP CP+PE+  GL  HTD   + +L QD +V GLQ+LK
Sbjct:    3 KNIKFPVVDLSKLIGEERDQTMALINDACENWGFFEIVNHGLPHDLMDNAEKMTKEHYKISMEQKF----NDMLKSKGLE---NLEREVEDVDWESTFYLRHLPQSNLY-DIPDMSDEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLLK 202          
BLAST of CX672037 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.368e-21
Identity = 62/209 (29.67%), Postives = 108/209 (51.67%), Query Frame = 3
Query:  189 KNVPVIDLAC---DDRSLIVQQVADACKNYGFFQAINHEVPLETVERVLEVAKEFFNLPVEEKLKLYSDDPSKTMRLSTSFNVNKEKVH----NWRDYLRLHCYPLDKYVPEWPSNPSTFKEFVSTYCSEVRGLGYRVLELISESLGLEKDYIKKVL-GEQGQHMA--VNFYPPCPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLK 785
            +N P+I+L      +R   ++++ DAC+N+GFF+ +NH +P E ++ V ++ K  +   +E++ K           L     +   +V     +W     L   P    + + P     ++E +  +   +  L   +L+L+ E+LGLEK Y+K    G +G +    V+ YPPCP+P+L  GL  HTD   + +L QD +V+GLQ+LK
Sbjct:    2 ENFPIINLEKLNGAERVATMEKINDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFK----------ELVAKKGLEGVEVEVTDMDWESTFFLRHLPSSN-ISQLPDLDDVYREVMRDFRKRLEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLK 199          
BLAST of CX672037 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.049e-19
Identity = 62/206 (30.10%), Postives = 105/206 (50.97%), Query Frame = 3
Query:  189 KNVPVIDLAC---DDRSLIVQQVADACKNYGFFQAINHEVPLETVERVLEVAKEFFNLPVEEKLKLYSDDPSKTMRLSTSFNVNKEKVH-NWRDYLRLHCYPLDKYVPEWPSNPSTFKEFVSTYCSEVRGLGYRVLELISESLGLEKDYIKKVL-GEQGQHMAVNF--YPPCPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLK 785
            ++ PVI++     ++R+  +  + DAC+N+GFF+ +NH +P E ++ V  V K  +   +E++ K      SK +       +  E    +W     L   P    + E P     ++  +  +   +  L   +L+L+ E+LGLEK Y+KK   G +G +       YPPCP+ +L  GL  HTD   + +L QD +V+GLQ+LK
Sbjct:    2 ESFPVINMEKMNGEERAATMGLINDACENWGFFELVNHGIPPELMDTVERVTKAHYKKCMEQRFKELV--ASKALE-----GIQAEVTDMDWESTYFLRHLPQSN-ISEVPDLDEEYRRVMKDFAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLLK 199          
BLAST of CX672037 vs. ExPASy Swiss-Prot
Match: G3OX1_ARATH (Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 7.784e-19
Identity = 63/208 (30.29%), Postives = 101/208 (48.56%), Query Frame = 3
Query:  189 KNVPVIDLACDDRSLIVQQVADACKNYGFFQAINHEVPLETVERVLEVAKEFFNLPVEEKLKLYSDDPSKT----MRLSTSFNVNKEKVHNWRDYLRLHCYPLDKYVPEWPSNPSTFKEFVSTYCSEVRGLGYRVLELISESLGLEKDYIK-----KVLGEQGQHMAVNFYPPCPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLK 785
            +N+P+IDL   D +    Q+  AC+ +G FQ  NH VPL  ++ +  +    F LPV+ KLK    +   +     R+++ FN        W +   +   PL+ +   WP +   + + V  Y   ++ L  +++ L   SLG+ ++ I+       L      + +N YP CPEP+   GL  HTD   LTIL Q+   AGLQV +
Sbjct:   55 ENIPLIDLDHPDAT---NQIGHACRTWGAFQISNHGVPLGLLQDIEFLTGSLFGLPVQRKLKSARSETGVSGYGVARIASFFNKQM-----WSEGFTITGSPLNDFRKLWPQHHLNYCDIVEEYEEHMKKLASKLMWLALNSLGVSEEDIEWASLSSDLNWAQAALQLNHYPVCPEPDRAMGLAAHTDSTLLTILYQN-NTAGLQVFR 253          
BLAST of CX672037 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.328e-18
Identity = 77/256 (30.08%), Postives = 118/256 (46.09%), Query Frame = 3
Query:   75 NQIMDTKVLSSGIRYTNLPEGYVRPESERPNLSEVSECKNVPVIDLA---CDDRSLIVQQ---VADACKNYGFFQAINHEVPLETVERVLEVAKEFFNLPVEEKLKLYSDDPSKTMRLSTSFNVNKEKVHNWRDYLRLHCYPLDKYVPEWPSNPSTFKEFVST---------------YCSEVRGLGYRVLELISESLGLEKDYIKKVLGEQGQHMAVNFYPPCPEPELTYGLPGHTDPNALTILLQDLEVAGLQV 779
            + I D K+L+    +  +P+ +V P+ E+P+ ++V   + VP+IDLA     D  L  +    V+ A   +GFF   NH V    + R       FF  P  EK K       ++   ++SF         W++ L        K+ PE   +  T K+FVS                Y   +  L  +++EL+  SLG+E+ Y K+   +      +N+YP C +PEL  G   H DP +LTIL QD +V GLQV
Sbjct:   22 SSIFDAKLLNQHSHH--IPQQFVWPDHEKPS-TDVQPLQ-VPLIDLAGFLSGDSCLASEATRLVSKAATKHGFFLITNHGVDESLLSRAYLHMDSFFKAPACEKQKAQRKW-GESSGYASSFVGRFSSKLPWKETLSF------KFSPEEKIHSQTVKDFVSKKMGDGYEDFGKVYQEYAEAMNTLSLKIMELLGMSLGVERRYFKEFFEDSDSIFRLNYYPQCKQPELALGTGPHCDPTSLTILHQD-QVGGLQV 265          
BLAST of CX672037 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.958e-18
Identity = 69/196 (35.20%), Postives = 103/196 (52.55%), Query Frame = 3
Query:  225 RSLIVQQVADACKNYGFFQAINHEVPLETVERVLEVAKEFFNLPVEE-KLKLYSDDPSKTMRLSTSFNVNKEKVHNWRDYLRLHCYPLDKY--VPEWPSN-PSTFKEFVSTYCSEVRGLGYRVLELISESLGLEKDYIKKVL--GEQGQHM---AVNFYPPCPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLK 785
            RS  +  + DAC+N+GFF+ +NH +  E  E+   V KE +       + + + +  +KT  L +  NV+ + + +W     L   P      VP+   +  ST KEF       +  L  R+L+L+ E+LGLEK Y+K+V   G  G       V+ YPPCP+PEL  GL  HTD   + +L QD  V+GLQ+LK
Sbjct:    9 RSDAMAVLRDACENWGFFELLNHGISHEPNEQSETVNKEHYREHYRRFREQRFKEFAAKT--LDSGENVDGDNL-DWESTFFLRHLPTSNISQVPDLDEDCGSTMKEFALG----LEKLAERLLDLLCENLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDTVSGLQLLK 197          
BLAST of CX672037 vs. ExPASy Swiss-Prot
Match: G2OX_PHACN (Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.607e-18
Identity = 66/209 (31.58%), Postives = 110/209 (52.63%), Query Frame = 3
Query:  195 VPVIDLACDD-RSLIVQQVADACKNYGFFQAINHEVPLETVERVLEVAKEFFNLPVEEKLKLYSDDP--SKTMRLSTSFNVNKEKVHNWRDYLRLHCYPLDKYVPE----WPSNPSTFKEFVSTYCSEVRGLGYRVLELISESLGL-EKDYIKKVLGEQGQH--MAVNFYPPCPEPEL----TYGLPGHTDPNALTILLQDLEVAGLQV 779
            +PV+DL   D ++LIV    +AC+++GFF+ +NH VPLE +  +   A  FF     EK +    DP    + R+  + +V       W +YL L+  P D   P+    +  NP  F+  V  Y + V+ + Y VLEL++E LG+ +++ + ++L ++       +N YPPCPE +       G   HTDP  +++L  +   +GLQ+
Sbjct:   27 IPVVDLTHPDAKNLIV----NACRDFGFFKLVNHGVPLELMANLENEALRFFKKSQSEKDRAGPPDPFGYGSKRIGPNGDV------GWVEYLLLNTNP-DVISPKSLCIFRENPHHFRAVVENYITAVKNMCYAVLELMAEGLGIRQRNTLSRLLKDEKSDSCFRLNHYPPCPEVQALNRNLVGFGEHTDPQIISVLRSN-STSGLQI 223          
BLAST of CX672037 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 5.579e-17
Identity = 65/225 (28.89%), Postives = 108/225 (48.00%), Query Frame = 3
Query:  165 NLSEVSECKNVPVIDL------ACDDRSLIVQQVADACKNYGFFQAINHEVPLETVERVLEVAKEFFNLPVEEKLKLYS--------DDPSKT----MRLSTSFNVNKEKVHNWRDYLRLHCYPLDKYVPEWPSNPSTFKEFVSTYCSEVRGLGYRVLELISESLGLEKDYIKKVLGEQGQHMAVNFYPPCPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLK 785
            +++ V E   +PVID+      A ++R    + +A A + +GFFQ INH + ++ +E++ +     F  P ++K K             PS T    +  S +F+V    + + +D+  L                ST ++F S    E   L Y + E+++E  G    + K+       ++ +N YPPCP+P   YGL  HTD + LTIL QD +V GLQ++K
Sbjct:   32 SVTAVVEEVELPVIDVSRLIDGAEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKKSKSEKFSAGSYRWGTPSATSIRQLSWSEAFHVPMTDISDNKDFTTLS---------------STMEKFAS----ESEALAYMLAEVLAEKSGQNSSFFKENCVRNTCYLRMNRYPPCPKPSEVYGLMPHTDSDFLTILYQD-QVGGLQLIK 236          
The following BLAST results are available for this feature:
BLAST of CX672037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
ACCO_PERAE5.760e-2231.371-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
ACCO2_DORSP1.676e-2133.491-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]
ACCO1_BRAJU3.733e-2131.731-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
ACCO2_SOLLC6.368e-2129.671-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO_DIOKA2.049e-1930.101-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
G3OX1_ARATH7.784e-1930.29Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis th... [more]
GAOX3_ARATH1.328e-1830.08Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana G... [more]
ACCO_DENCR2.958e-1835.201-aminocyclopropane-1-carboxylate oxidase OS=Dendr... [more]
G2OX_PHACN8.607e-1831.58Gibberellin 2-beta-dioxygenase OS=Phaseolus coccin... [more]
G2OX8_ARATH5.579e-1728.89Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14E12_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14E12-I24-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672037 ID=CX672037; Name=CX672037; organism=Citrus sinensis; type=EST; length=786bp
CTAGAAGGTGCAAATACTTTTGCTCTCTTTAATTTTTTATCACTATGCTA
TCTGCATATATAGATAATTAATAAAATCAAATTATGGATACCAAAGTTCT
GTCCTCGGGAATCCGGTACACAAACTTGCCGGAGGGCTACGTAAGGCCAG
AATCGGAGAGACCAAATCTGTCTGAAGTTTCTGAATGCAAAAACGTTCCT
GTTATTGATTTGGCTTGTGATGATAGAAGCTTAATTGTGCAACAAGTTGC
TGATGCTTGCAAGAATTATGGATTTTTCCAGGCGATAAATCACGAAGTGC
CTTTAGAAACAGTGGAAAGAGTCTTAGAAGTGGCGAAAGAGTTTTTTAAC
CTGCCAGTCGAGGAGAAGCTGAAGCTCTACTCAGATGATCCATCAAAGAC
AATGAGATTGTCAACGAGTTTTAATGTCAACAAGGAGAAAGTTCACAATT
GGAGAGATTACCTCAGACTTCACTGCTATCCTCTTGACAAGTATGTGCCT
GAGTGGCCTTCAAATCCATCTACCTTCAAGGAATTTGTAAGTACTTATTG
TTCAGAAGTTCGAGGACTCGGCTATAGAGTGCTGGAATTAATATCAGAGA
GCTTAGGTTTGGAAAAAGATTACATAAAGAAAGTGTTGGGTGAACAAGGA
CAGCATATGGCTGTGAACTTTTACCCACCATGTCCAGAGCCAGAGCTTAC
TTATGGATTGCCAGGACACACTGACCCAAATGCCCTTACCATTTTATTGC
AAGATTTAGAAGTGGCAGGTCTTCAAGTTCTCAAAG
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