CX672025
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX672025 vs. ExPASy Swiss-Prot
Match: MDHM1_ARATH (Malate dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=At1g53240 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.488e-38 Identity = 45/64 (70.31%), Postives = 51/64 (79.69%), Query Frame = 1
Query: 556 VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 747
V G++G L AL G D+VIIPAGVPRKPGMTRDDLFNINAGIVK LC IAK CP A++N+I
Sbjct: 82 VVGYMGDDNLAKALEGADLVIIPAGVPRKPGMTRDDLFNINAGIVKNLCTAIAKYCPHALINMI 145 HSP 2 Score: 83.1889 bits (204), Expect = 5.488e-38 Identity = 38/58 (65.52%), Postives = 47/58 (81.03%), Query Frame = 2
Query: 326 AKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNA 499
+ G P KVA+LGAAGGIGQPLA+LMK+NPLVS L LYD+ NTPGV AD+ H++T +
Sbjct: 23 SSGSVPERKVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIANTPGVAADVGHINTRS 80
BLAST of CX672025 vs. ExPASy Swiss-Prot
Match: MDHM_FRAAN (Malate dehydrogenase, mitochondrial OS=Fragaria ananassa GN=MMDHI PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 9.316e-38 Identity = 45/64 (70.31%), Postives = 55/64 (85.94%), Query Frame = 1
Query: 556 VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 747
V+G+ G++QL +AL G D+VIIPAGVPRKPGMTRDDLFNINAGIV++L IAK CP AI+N+I
Sbjct: 79 VKGYAGEEQLGEALEGCDVVIIPAGVPRKPGMTRDDLFNINAGIVRSLTAAIAKYCPHAIINMI 142 HSP 2 Score: 80.8777 bits (198), Expect = 9.316e-38 Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 2
Query: 341 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNA 499
P KVAVLGAAGGIGQPLA+LMK+NPLVS L LYD+ TPGV AD+SH++T +
Sbjct: 25 PQRKVAVLGAAGGIGQPLALLMKLNPLVSQLSLYDIAGTPGVAADVSHINTRS 77
BLAST of CX672025 vs. ExPASy Swiss-Prot
Match: MDHM_BRANA (Malate dehydrogenase, mitochondrial OS=Brassica napus GN=MDH PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.931e-37 Identity = 45/64 (70.31%), Postives = 50/64 (78.12%), Query Frame = 1
Query: 556 VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 747
V G++G L AL G D+VIIPAGVPRKPGMTRDDLFNINAGIVK L IAK CP A+VN+I
Sbjct: 82 VVGYMGDDNLAKALEGADLVIIPAGVPRKPGMTRDDLFNINAGIVKNLWSAIAKYCPHALVNMI 145 HSP 2 Score: 83.1889 bits (204), Expect = 5.931e-37 Identity = 38/58 (65.52%), Postives = 47/58 (81.03%), Query Frame = 2
Query: 326 AKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNA 499
+ G P KVA+LGAAGGIGQPLA+LMK+NPLVS L LYD+ NTPGV AD+ H++T +
Sbjct: 23 SSGSVPERKVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIANTPGVAADVGHINTRS 80
BLAST of CX672025 vs. ExPASy Swiss-Prot
Match: MDHM2_ARATH (Malate dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=At3g15020 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.345e-36 Identity = 45/64 (70.31%), Postives = 51/64 (79.69%), Query Frame = 1
Query: 556 VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 747
V G++G L AL G D+VIIPAGVPRKPGMTRDDLFNINAGIVK L IAK CP+A+VN+I
Sbjct: 82 VSGYMGDDDLGKALEGADLVIIPAGVPRKPGMTRDDLFNINAGIVKNLSIAIAKYCPQALVNMI 145 HSP 2 Score: 78.9518 bits (193), Expect = 8.345e-36 Identity = 35/53 (66.04%), Postives = 44/53 (83.02%), Query Frame = 2
Query: 341 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNA 499
P KV +LGAAGGIGQPL++LMK+NPLVS L LYD+ NTPGV AD+ H++T +
Sbjct: 28 PDRKVVILGAAGGIGQPLSLLMKLNPLVSSLSLYDIANTPGVAADVGHINTRS 80
BLAST of CX672025 vs. ExPASy Swiss-Prot
Match: MDHP_ARATH (Malate dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=At3g47520 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.141e-33 Identity = 40/64 (62.50%), Postives = 50/64 (78.12%), Query Frame = 1
Query: 556 VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 747
VR F G +L D L +++V+IPAGVPRKPGMTRDDLFNINA IVKTL E +A+ CP A +++I
Sbjct: 135 VRDFTGPSELADCLKDVNVVVIPAGVPRKPGMTRDDLFNINANIVKTLVEAVAENCPNAFIHII 198 HSP 2 Score: 76.2554 bits (186), Expect = 2.141e-33 Identity = 34/49 (69.39%), Postives = 43/49 (87.76%), Query Frame = 2
Query: 347 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT 493
+KVAVLGAAGGIGQPL++L+K++PLVS LHLYD+ N GV AD+SH +T
Sbjct: 83 YKVAVLGAAGGIGQPLSLLIKMSPLVSTLHLYDIANVKGVAADLSHCNT 131
BLAST of CX672025 vs. ExPASy Swiss-Prot
Match: MDHM_MOUSE (Malate dehydrogenase, mitochondrial OS=Mus musculus GN=Mdh2 PE=1 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 1.365e-32 Identity = 43/70 (61.43%), Postives = 55/70 (78.57%), Query Frame = 1
Query: 541 VDSRA-VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 747
+++RA V+G+LG +QL D L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL A+ CP+A+V +I
Sbjct: 71 IETRANVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMVCII 140 HSP 2 Score: 73.559 bits (179), Expect = 1.365e-32 Identity = 34/50 (68.00%), Postives = 44/50 (88.00%), Query Frame = 2
Query: 350 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNA 499
KVAVLGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A
Sbjct: 26 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRA 75
BLAST of CX672025 vs. ExPASy Swiss-Prot
Match: MDHM_RAT (Malate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Mdh2 PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 1.777e-32 Identity = 42/70 (60.00%), Postives = 55/70 (78.57%), Query Frame = 1
Query: 541 VDSRA-VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 747
+++RA V+G+LG +QL D L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL A+ CP+A++ +I
Sbjct: 71 IETRANVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICII 140 HSP 2 Score: 73.559 bits (179), Expect = 1.777e-32 Identity = 34/50 (68.00%), Postives = 44/50 (88.00%), Query Frame = 2
Query: 350 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNA 499
KVAVLGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A
Sbjct: 26 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRA 75
BLAST of CX672025 vs. ExPASy Swiss-Prot
Match: MDHM_HUMAN (Malate dehydrogenase, mitochondrial OS=Homo sapiens GN=MDH2 PE=1 SV=3) HSP 1 Score: 87.4261 bits (215), Expect = 1.777e-32 Identity = 41/65 (63.08%), Postives = 51/65 (78.46%), Query Frame = 1
Query: 553 AVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 747
AV+G+LG +QL D L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL A+ CP+A++ +I
Sbjct: 76 AVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICVI 140 HSP 2 Score: 73.559 bits (179), Expect = 1.777e-32 Identity = 34/50 (68.00%), Postives = 44/50 (88.00%), Query Frame = 2
Query: 350 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNA 499
KVAVLGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A
Sbjct: 26 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETKA 75
BLAST of CX672025 vs. ExPASy Swiss-Prot
Match: MDHM_BOVIN (Malate dehydrogenase, mitochondrial OS=Bos taurus GN=MDH2 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.777e-32 Identity = 42/70 (60.00%), Postives = 55/70 (78.57%), Query Frame = 1
Query: 541 VDSRA-VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 747
+++RA V+G+LG +QL D L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL A+ CP+A++ +I
Sbjct: 71 IETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICII 140 HSP 2 Score: 73.559 bits (179), Expect = 1.777e-32 Identity = 34/50 (68.00%), Postives = 44/50 (88.00%), Query Frame = 2
Query: 350 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNA 499
KVAVLGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A
Sbjct: 26 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRA 75
BLAST of CX672025 vs. ExPASy Swiss-Prot
Match: MDHM_CAEEL (Probable malate dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=mdh-1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.014e-32 Identity = 44/75 (58.67%), Postives = 55/75 (73.33%), Query Frame = 2
Query: 275 TLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNA 499
TL +SGL + R +P KVA+LGAAGGIGQPL +L+K +PLV+ L LYDVVNTPGV AD+SH+D+NA
Sbjct: 7 TLVQAAANSGLRAVSVRHSSQAP--KVALLGAAGGIGQPLGLLLKQDPLVAHLALYDVVNTPGVAADLSHIDSNA 79 HSP 2 Score: 78.1814 bits (191), Expect = 3.014e-32 Identity = 39/70 (55.71%), Postives = 50/70 (71.43%), Query Frame = 1
Query: 541 VDSRA-VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 747
+DS A V G ++L A+ D+++IPAGVPRKPGMTRDDLFN NAGIV+ L IAK PKA++ +I
Sbjct: 75 IDSNAKVTAHTGPKELYAAVENADVIVIPAGVPRKPGMTRDDLFNTNAGIVRDLAAVIAKASPKALIAII 144 The following BLAST results are available for this feature:
BLAST of CX672025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 156
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Sequences
The
following sequences are available for this feature:
EST sequence >CX672025 ID=CX672025; Name=CX672025; organism=Citrus sinensis; type=EST; length=748bpback to top |