CX671975

Overview
NameCX671975
Unique NameCX671975
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length781
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y1992_XYLFT (UPF0061 protein PD_1992 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=PD_1992 PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.878e-41
Identity = 94/163 (57.67%), Postives = 109/163 (66.87%), Query Frame = 3
Query:  288 LNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            L +++ F+  LP DP      R+VL A +++V+P+  V  P L+A+S  VA  L  D +E   P F   FSG     G  PYA  YGGHQFG W GQLGDGR ITLGE+L      +ELQLKGAG TPYSR ADG AVLRSSIREFLCSEAMH LGIPTTRAL
Sbjct:    4 LRFNNRFIDVLPCDPEVSLRSRQVLEA-WSRVAPTP-VPMPCLLAYSSEVAAILNFDAEELVTPRFVEVFSGNALYTGMQPYAVNYGGHQFGQWVGQLGDGRVITLGELLGADGVYYELQLKGAGPTPYSRGADGRAVLRSSIREFLCSEAMHHLGIPTTRAL 164          
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y2619_XYLFA (UPF0061 protein XF_2619 OS=Xylella fastidiosa GN=XF_2619 PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.136e-41
Identity = 94/163 (57.67%), Postives = 108/163 (66.26%), Query Frame = 3
Query:  288 LNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            L +++ F+  LP DP      R+VL A ++ V+P+  V  P L+A+S  VA  L  D +E   P F   FSG     G  PYA  YGGHQFG W GQLGDGR ITLGE+L      +ELQLKGAG TPYSR ADG AVLRSSIREFLCSEAMH LGIPTTRAL
Sbjct:    4 LRFNNRFIAVLPCDPEVSLRSRQVLEA-WSGVAPTP-VPVPCLLAYSSEVAAILNFDAEELVTPRFVEVFSGNALYPGMQPYAVNYGGHQFGQWVGQLGDGRVITLGELLGADGVYYELQLKGAGPTPYSRGADGRAVLRSSIREFLCSEAMHHLGIPTTRAL 164          
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y2392_XANAC (UPF0061 protein XAC2392 OS=Xanthomonas axonopodis pv. citri GN=XAC2392 PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.542e-40
Identity = 93/163 (57.06%), Postives = 107/163 (65.64%), Query Frame = 3
Query:  288 LNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            L +D+   ++LPGDP   S  REV  A ++ V P+  V  P L+A S  +A  L LD  E     F   F G     G  P+A  YGGHQFG WAGQLGDGRAI+LGE +     R+ELQLKGAG TPYSR ADG AVLRSSIREFLCSEAMH LG+PTTRAL
Sbjct:    4 LRFDNRLRQQLPGDPEEGSRRREVSVA-WSAVLPTP-VAAPSLIAHSAEMAQVLGLDAAEIASAQFAQVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGTDGGRYELQLKGAGPTPYSRGADGRAVLRSSIREFLCSEAMHHLGVPTTRAL 164          
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y2589_XANC5 (UPF0061 protein XCV2589 OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=XCV2589 PE=3 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 7.890e-40
Identity = 91/163 (55.83%), Postives = 108/163 (66.26%), Query Frame = 3
Query:  288 LNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            L++D+   ++LPGDP   +  REV  A ++ V P+  V  P L+A S  +A  L L+  E     F   F G     G  P+A  YGGHQFG WAGQLGDGRAI+LGE +     R+ELQLKGAG TPYSR ADG AVLRSSIREFLCSEAMH LG+PTTRAL
Sbjct:    4 LHFDNRLRQQLPGDPEEGARRREV-GAAWSSVLPTP-VAAPYLIAHSAEMAQVLGLEAAEIASAQFAQVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGTDGGRYELQLKGAGPTPYSRGADGRAVLRSSIREFLCSEAMHHLGVPTTRAL 164          
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y2793_FLAJ1 (UPF0061 protein Fjoh_2793 OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=Fjoh_2793 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.139e-38
Identity = 85/166 (51.20%), Postives = 112/166 (67.47%), Query Frame = 3
Query:  279 LEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            +++L  ++ F  ELP DP   +  R+V +  ++ V+P+ +  NP+L+  SE  A  + +  +E    +F   FSG   L    PYA CY GHQFG WAGQLGDGRAI L E+ N  +  + LQLKGAGKTPYSR ADGLAVLRSSIRE+LC+EAM+ LG+PTTR+L
Sbjct:    1 MKNLKINNRFTAELPADPDLTNETRQVKNTAFSYVNPT-KPSNPKLIHASEETAALVGISKEEIHSEEFLNVFSGKEILPETQPYAMCYAGHQFGNWAGQLGDGRAINLTEVEN-NNTFYTLQLKGAGKTPYSRTADGLAVLRSSIREYLCAEAMYHLGVPTTRSL 164          
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: SELO_HUMAN (Selenoprotein O OS=Homo sapiens GN=SELO PE=2 SV=3)

HSP 1 Score: 159.458 bits (402), Expect = 1.943e-38
Identity = 93/173 (53.76%), Postives = 107/173 (61.85%), Query Frame = 3
Query:  279 LEDLNWDHSFVRELP------GDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELD--PKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRA 773
            L  L +D+  +R LP      G     S PR V  AC+T+V P+  +  P+LVA SE     L L   P      +  LFFSG   L GA P A CY GHQFG +AGQLGDG A+ LGE+     ERWELQLKGAG TP+SR ADG  VLRSSIREFLCSEAM  LG+PTTRA
Sbjct:   45 LAGLRFDNRALRALPVEAPPPGPEGAPSAPRPVPGACFTRVQPTP-LRQPRLVALSEPALALLGLGAPPAREAEAEAALFFSGNALLPGAEPAAHCYCGHQFGQFAGQLGDGAAMYLGEVCTATGERWELQLKGAGPTPFSRQADGRKVLRSSIREFLCSEAMFHLGVPTTRA 216          
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y396_XANOP (UPF0061 protein PXO_00396 OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=PXO_00396 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.538e-38
Identity = 89/166 (53.61%), Postives = 108/166 (65.06%), Query Frame = 3
Query:  279 LEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            +  L++D+   ++LPG     +  REV  A ++ V P+  V  P L+A S  +A  L LD  E     F   F G     G  P+A  YGGHQFG WAGQLGDGRAI+LGE + +   R+ELQLKGAG TPYSR ADG AVLRSSIREFLCSE+MH LG+PTTRAL
Sbjct:    1 MTQLHFDNRLRQQLPGYQEEGARRREV-RAAWSAVMPTP-VAAPYLIAHSAEMAHVLGLDASEVASAAFAQVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGIDGGRYELQLKGAGPTPYSRGADGRAVLRSSIREFLCSESMHHLGVPTTRAL 164          
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y2718_XANOR (UPF0061 protein XOO2718 OS=Xanthomonas oryzae pv. oryzae GN=XOO2718 PE=3 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 2.538e-38
Identity = 89/166 (53.61%), Postives = 108/166 (65.06%), Query Frame = 3
Query:  279 LEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            +  L++D+   ++LPG     +  REV  A ++ V P+  V  P L+A S  +A  L LD  E     F   F G     G  P+A  YGGHQFG WAGQLGDGRAI+LGE + +   R+ELQLKGAG TPYSR ADG AVLRSSIREFLCSE+MH LG+PTTRAL
Sbjct:    1 MTQLHFDNRLRQQLPGYQEEGARRREV-RAAWSAVMPTP-VAAPYLIAHSAEMAHVLGLDASEVASAAFAQVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGIDGGRYELQLKGAGPTPYSRGADGRAVLRSSIREFLCSESMHHLGVPTTRAL 164          
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y2563_XANOM (UPF0061 protein XOO2563 OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=XOO2563 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.538e-38
Identity = 89/166 (53.61%), Postives = 108/166 (65.06%), Query Frame = 3
Query:  279 LEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            +  L++D+   ++LPG     +  REV  A ++ V P+  V  P L+A S  +A  L LD  E     F   F G     G  P+A  YGGHQFG WAGQLGDGRAI+LGE + +   R+ELQLKGAG TPYSR ADG AVLRSSIREFLCSE+MH LG+PTTRAL
Sbjct:    1 MTQLHFDNRLRQQLPGYQEEGARRREV-RAAWSAVMPTP-VAAPYLIAHSAEMAHVLGLDASEVASAAFAQVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGIDGGRYELQLKGAGPTPYSRGADGRAVLRSSIREFLCSESMHHLGVPTTRAL 164          
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: SELO_MOUSE (Selenoprotein O OS=Mus musculus GN=Selo PE=1 SV=3)

HSP 1 Score: 156.762 bits (395), Expect = 1.260e-37
Identity = 92/173 (53.18%), Postives = 108/173 (62.43%), Query Frame = 3
Query:  279 LEDLNWDHSFVRELP------GDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFER--PDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRA 773
            L  L +D+  +RELP      G   + + PR V  AC+++  P A +  P+LVA SE     L L+  E      +  LFFSG   L G  P A CY GHQFG +AGQLGDG A+ LGE+     ERWELQLKGAG TP+SR ADG  VLRSSIREFLCSEAM  LGIPTTRA
Sbjct:   46 LAGLRFDNRALRELPVETPPPGPEDSLATPRPVPGACFSRARP-APLRRPRLVALSEPALALLGLEASEEAEVEAEAALFFSGNALLPGTEPAAHCYCGHQFGQFAGQLGDGAAMYLGEVCTAAGERWELQLKGAGPTPFSRQADGRKVLRSSIREFLCSEAMFHLGIPTTRA 217          
The following BLAST results are available for this feature:
BLAST of CX671975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 259
Match NameE-valueIdentityDescription
Y1992_XYLFT1.878e-4157.67UPF0061 protein PD_1992 OS=Xylella fastidiosa (str... [more]
Y2619_XYLFA7.136e-4157.67UPF0061 protein XF_2619 OS=Xylella fastidiosa GN=X... [more]
Y2392_XANAC3.542e-4057.06UPF0061 protein XAC2392 OS=Xanthomonas axonopodis ... [more]
Y2589_XANC57.890e-4055.83UPF0061 protein XCV2589 OS=Xanthomonas campestris ... [more]
Y2793_FLAJ11.139e-3851.20UPF0061 protein Fjoh_2793 OS=Flavobacterium johnso... [more]
SELO_HUMAN1.943e-3853.76Selenoprotein O OS=Homo sapiens GN=SELO PE=2 SV=3[more]
Y396_XANOP2.538e-3853.61UPF0061 protein PXO_00396 OS=Xanthomonas oryzae pv... [more]
Y2718_XANOR2.538e-3853.61UPF0061 protein XOO2718 OS=Xanthomonas oryzae pv. ... [more]
Y2563_XANOM2.538e-3853.61UPF0061 protein XOO2563 OS=Xanthomonas oryzae pv. ... [more]
SELO_MOUSE1.260e-3753.18Selenoprotein O OS=Mus musculus GN=Selo PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14C03_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14C03-E6-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671975 ID=CX671975; Name=CX671975; organism=Citrus sinensis; type=EST; length=781bp
CTAAACCACACCTCCTCTTCTCTTCACTCTCTTCTTCTTCTTCTTCTCTC
CGCCCTCGCCTCCCCAAATTCCCGTTCTACCCCGCCTACTTTACAAAGTC
TCCATCCTGTCCTTCCATCGCATGCCACGTCAGCACGACAGGCGGCGGCG
GTGCTGCGCAGATGGAGTCGAGTGCGTCTGTCGATTCGGTGACGCATGAT
TTGAAGAATCAGAGATTGGATACGGAAACGGAAACGGACGGCGGAGATGA
GAGCAAGATGACGAAGAAGCTGAAAGCTCTTGAGGATCTGAATTGGGACC
ACTCGTTTGTTCGAGAGTTGCCTGGTGATCCCAGGACTGATTCTATCCCT
CGTGAGGTATTGCATGCCTGTTATACTAAAGTTTCTCCGTCAGCTGAAGT
AGAAAATCCTCAGCTTGTTGCGTGGTCAGAATCAGTGGCCGATTCTCTTG
AGTTGGATCCTAAAGAATTTGAAAGACCAGATTTTCCCCTCTTTTTTTCT
GGGGCTACTCCTTTGGCGGGAGCGGTGCCATATGCTCAATGCTACGGTGG
ACATCAATTTGGCATGTGGGCTGGTCAGCTGGGTGATGGTCGGGCAATAA
CTCTTGGCGAGATCCTGAATTTGAAGTCGGAAAGGTGGGAATTGCAGCTT
AAAGGAGCTGGGAAGACTCCATATAGCCGCTTTGCTGATGGCCTTGCAGT
ACTGCGTAGTAGCATCAGGGAGTTCCTTTGCAGTGAAGCCATGCACTTTT
TAGGAATCCCAACAACTCGTGCACTTTGTCT
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