CX671974
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y2935_VARPS (UPF0061 protein Vapar_2935 OS=Variovorax paradoxus (strain S110) GN=Vapar_2935 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.000e-22 Identity = 73/199 (36.68%), Postives = 107/199 (53.77%), Query Frame = -3 Query: 259 PDIGLWNIAQFSTTLAAAKLIDDKE-ANYVMERYGTKFMDEYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 843 P++ WN+ F A LI D+E A +E Y T F E+++ M KLGL + ++ +I +L MA +KVDYT F+R LS A + P++ + LD + + +W+LS+ + + + + LM NPKYVLRN+L Q AI+AA DF V LL L+E P++E PG + YA PP WA Sbjct: 302 PNVAYWNL--FCLAQALLPLIGDQEIAVAALESYKTVFPREFESRMRAKLGLAEPAEGDRALIEGVLKLMAAEKVDYTIFWRRLSQHMAGGNAE------PVRDLFLD-----RAGFDAWLLSFSER--HAQLPRAQAADLMLRSNPKYVLRNHLGQQAIEAASQKDFSAVATLLALLETPFEEHPGADAYAGFPPDWA 485
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1931_VIBCH (UPF0061 protein VC_1931 OS=Vibrio cholerae GN=VC_1931 PE=3 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.306e-22 Identity = 72/203 (35.47%), Postives = 105/203 (51.72%), Query Frame = -3 Query: 262 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNK---QIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQ----ELLSSG--ISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 843 P IGLWN++ + L+ LID + + Y + + +M KLGL + ++ + +A + DYT F R LS + + E ++ L +LD +EA +W+ Y++ EL G IS ER M VNPKY+LRNYL Q AI+ AE GDF E++RL ++ PY E P E+YA+LPP W Sbjct: 291 PRIGLWNLSALAHALSP--LIDKDDLEAALGSYSERLNLHFSRLMRAKLGLATQQEGDGELFADFFALLANNHTDYTRFLRELSCLDRQGN----EAVIDL---VLD-----REAAKTWLTRYLERAARELGQEGRPISTRERCQAMRQVNPKYILRNYLAQQAIEFAERGDFEEMQRLATVLASPYAEHPEFERYAKLPPEW 479
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y585_METCA (UPF0061 protein MCA0585 OS=Methylococcus capsulatus GN=MCA0585 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.228e-22 Identity = 72/200 (36.00%), Postives = 98/200 (49.00%), Query Frame = -3 Query: 268 PDIGLWNIAQF----STTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSS-GISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPP 843 P++G WN + S LA A + ++ RY + + KLGL + + +I + L + + D+T FR L ++ D P + + DI A+ +WV Y L S + DE R MN VNPKYVLRN+L Q AID A LGD+ EV RL +L+ RPYDEQP ME YA PP Sbjct: 302 PEVGRWNCERLLQAVSPLLADAPGRAAEIGQDLLRRYASVYHRAVMRGWADKLGLREVRETDAGLIDEFLGLLQRGRGDFTRSFRLLGRIRTDSDAPARGV----REAFADIN-----AFDAWVADYRTRLRSEQNVDDEARAGRMNRVNPKYVLRNHLAQIAIDKAMLGDYSEVARLAELLRRPYDEQPDMEAYAAEPP 492
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y4511_AZOVD (UPF0061 protein Avin_45110 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=Avin_45110 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.228e-22 Identity = 66/196 (33.67%), Postives = 102/196 (52.04%), Query Frame = -3 Query: 262 IGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEE-RKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 837 I WN++ L +D ++R+ F + +M ++LG +++ I +LL M VDY+ FFR L + A ++ L+ +D+ + +W ++ L +DE R+A M++VNPKY+LRNYL Q AI+AAE GD+ VR L ++ RP+DEQPGME+YA PP W Sbjct: 295 IAHWNLSALGQALTP--FVDKDALLGSLKRFLPLFRGAWLELMRRRLGFTTAEADDRERIQRLLQLMQGSAVDYSRFFRELGDRPAAAALRR------LREDFVDLA-----GFDAWAGDHLARLARENEADEAARRARMHAVNPKYILRNYLAQQAIEAAERGDYSPVRELHAVLSRPFDEQPGMERYAERPPEW 477
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y486_PSEF5 (UPF0061 protein PFL_0486 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=PFL_0486 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.910e-22 Identity = 70/200 (35.00%), Postives = 109/200 (54.50%), Query Frame = -3 Query: 262 IGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQA----IMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEE-RKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 837 IG WN++ + L ++ + E G F+ YQA +M ++LG + +++++ +LL M VDY+ FFR L PE + L L+ +D + + +W Y + + I ++ R+A M++VNP Y+LRNYL Q AIDAAE GD+ EVRRL +++ RP++EQPGM+ YA PP W Sbjct: 295 IGQWNLSALAQALTPFISVEA-----LRESLGL-FLPLYQAHYLDLMRRRLGFTQAEDDDQKLVERLLQLMQNSGVDYSLFFRRLGE-----HAPE-QALARLRDDFVD-----RNGFDAWAELYRERVARDPIQGQDLRRARMHAVNPLYILRNYLAQKAIDAAEAGDYSEVRRLHQVLSRPFEEQPGMDSYAERPPEW 477
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y185_AERS4 (UPF0061 protein ASA_0185 OS=Aeromonas salmonicida (strain A449) GN=ASA_0185 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.963e-22 Identity = 69/197 (35.03%), Postives = 95/197 (48.22%), Query Frame = -3 Query: 262 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 843 P +G WN+ + + LA +D + +Y + M Y +M KLGL ++ ++ + +L +A VDY F R L V P L A+L D + W W+ Y L G D RKA M+++NPKYVLRN L Q AIDAAE GD + RLL +++PYDEQP A P W Sbjct: 281 PAVGYWNLQKLAQALAGH--VDGDALATSLAQYEHQLMLHYSELMRAKLGLTQWEEEDPALFRQLFQLLASQGVDYHLFLRRLGEVTGTGEWPAS-----LLALLPD-----PDLWQGWLELYRVRLTREGGEDAVRKAQMDAINPKYVLRNALAQQAIDAAEGGDMTQFERLLAALQQPYDEQPEYADLATPVPQW 465
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y369_PSEE4 (UPF0061 protein PSEEN0369 OS=Pseudomonas entomophila (strain L48) GN=PSEEN0369 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.482e-22 Identity = 65/195 (33.33%), Postives = 99/195 (50.77%), Query Frame = -3 Query: 262 IGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 837 I WN++ + L +I+ + + + + Y +M ++LGL ++ +LL M VDYT FFR L P E L ++ +D+ + +W + Y+ + E R+ M +VNP YVLRNYL Q AI+AAE GD+ EVRRL +++ RP++EQPGM+ YA PP W Sbjct: 295 IAHWNLSALAQALTT--VIEVEPLKEALGLFLPLYQAHYLDLMRRRLGLTTAEDDDMALVERLLQRMQSGGVDYTLFFRKLGER------PVAEALKVVRDDFVDLA-----GFDAWGVEYLARCEREPGNAEGRRERMQAVNPLYVLRNYLAQKAIEAAEAGDYSEVRRLHQVLSRPFEEQPGMQAYAERPPEW 476
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1896_BURCM (UPF0061 protein Bamb_1896 OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=Bamb_1896 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.482e-22 Identity = 64/182 (35.16%), Postives = 98/182 (53.85%), Query Frame = -3 Query: 259 AAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLP---KYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 795 A + +DD +A V+ ++ +F + M KLGL + + ++ +KLL M D+T FR L+ + + + P++ + +D ++A+ +W Y + L D R A MN VNPKYVLRN+L + AI A+ DF EV RL +++ RP+DEQP E YA LPP WA Sbjct: 343 AERAVDDAQA--VLAKFPERFGPALERAMRAKLGLELERENDAELANKLLETMHASHADFTLTFRRLAQLSKHDASRD----APVRDLFID-----RDAFDAWANLYRERLSEETRDDAARAAAMNRVNPKYVLRNHLAEVAIRRAKEKDFSEVERLAQVLRRPFDEQPEHEAYAALPPDWA 513
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1396_RALEJ (UPF0061 protein Reut_A1396 OS=Ralstonia eutropha (strain JMP134) GN=Reut_A1396 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.106e-21 Identity = 63/171 (36.84%), Postives = 92/171 (53.80%), Query Frame = -3 Query: 259 ERYGTKFMDEYQAIMTKKLGL------PKYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 753 +RY ++F Y+A KLG+ K ++ +++ L + VDYT F+R L+ + + + P++ + LD + AW +W SY L + D R+ M +VNPKYVLRN+L + AI A DF EV RLL ++ RP+DEQP E YA LPP WA Sbjct: 354 DRYASEFFRHYRA----KLGIHMPAGGDKEDEPLLTSLFQLLHEQHVDYTLFWRNLARISSADGSGD----APVRDLFLD-----RAAWDTWAESYRNRLRAEQSDDAARRVAMLAVNPKYVLRNHLAEIAIRRAREKDFSEVDRLLAVLSRPFDEQPEAEAYAALPPDWA 511
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y4038_DECAR (UPF0061 protein Daro_4038 OS=Dechloromonas aromatica (strain RCB) GN=Daro_4038 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.444e-21 Identity = 66/198 (33.33%), Postives = 99/198 (50.00%), Query Frame = -3 Query: 259 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 843 P + WN+ + D V E YG F ++ +M KLGL ++ I + + + D+T FFR LS + + E + A L D+ +R A +W+ ++ L + D ER+A M + NPKYVLRN+L ++AI A+L D+ +V+RLL + RPYDEQP + A LPP WA Sbjct: 297 PHVAQWNLYCLADAFLPLLKHPDISRVAVDETYGDAFAQTFERLMCAKLGLRHALPDDENFIGETFGFLQQHRPDFTLFFRRLSRLSGGL---DGEAMAKADAPLRDLFVDRA-ACDAWLANWRARLAQTPWDDGERQASMLAANPKYVLRNWLAEAAIRKAKLKDYSDVQRLLTCLRRPYDEQPEFDDLAALPPDWA 490 The following BLAST results are available for this feature:
BLAST of CX671974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 196
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671974 ID=CX671974; Name=CX671974; organism=Citrus sinensis; type=EST; length=845bpback to top |