CX671974

Overview
NameCX671974
Unique NameCX671974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y2935_VARPS (UPF0061 protein Vapar_2935 OS=Variovorax paradoxus (strain S110) GN=Vapar_2935 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.000e-22
Identity = 73/199 (36.68%), Postives = 107/199 (53.77%), Query Frame = -3
Query:  259 PDIGLWNIAQFSTTLAAAKLIDDKE-ANYVMERYGTKFMDEYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 843
            P++  WN+  F    A   LI D+E A   +E Y T F  E+++ M  KLGL +    ++ +I  +L  MA +KVDYT F+R LS   A  +        P++ + LD     +  + +W+LS+ +    + +   +   LM   NPKYVLRN+L Q AI+AA   DF  V  LL L+E P++E PG + YA  PP WA
Sbjct:  302 PNVAYWNL--FCLAQALLPLIGDQEIAVAALESYKTVFPREFESRMRAKLGLAEPAEGDRALIEGVLKLMAAEKVDYTIFWRRLSQHMAGGNAE------PVRDLFLD-----RAGFDAWLLSFSER--HAQLPRAQAADLMLRSNPKYVLRNHLGQQAIEAASQKDFSAVATLLALLETPFEEHPGADAYAGFPPDWA 485          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1931_VIBCH (UPF0061 protein VC_1931 OS=Vibrio cholerae GN=VC_1931 PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.306e-22
Identity = 72/203 (35.47%), Postives = 105/203 (51.72%), Query Frame = -3
Query:  262 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNK---QIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQ----ELLSSG--ISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 843
            P IGLWN++  +  L+   LID  +    +  Y  +    +  +M  KLGL    +   ++ +     +A +  DYT F R LS +    +    E ++ L   +LD     +EA  +W+  Y++    EL   G  IS  ER   M  VNPKY+LRNYL Q AI+ AE GDF E++RL  ++  PY E P  E+YA+LPP W
Sbjct:  291 PRIGLWNLSALAHALSP--LIDKDDLEAALGSYSERLNLHFSRLMRAKLGLATQQEGDGELFADFFALLANNHTDYTRFLRELSCLDRQGN----EAVIDL---VLD-----REAAKTWLTRYLERAARELGQEGRPISTRERCQAMRQVNPKYILRNYLAQQAIEFAERGDFEEMQRLATVLASPYAEHPEFERYAKLPPEW 479          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y585_METCA (UPF0061 protein MCA0585 OS=Methylococcus capsulatus GN=MCA0585 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.228e-22
Identity = 72/200 (36.00%), Postives = 98/200 (49.00%), Query Frame = -3
Query:  268 PDIGLWNIAQF----STTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSS-GISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPP 843
            P++G WN  +     S  LA A     +    ++ RY + +          KLGL +  +    +I + L  +   + D+T  FR L  ++ D   P   +    +    DI      A+ +WV  Y   L S   + DE R   MN VNPKYVLRN+L Q AID A LGD+ EV RL +L+ RPYDEQP ME YA  PP
Sbjct:  302 PEVGRWNCERLLQAVSPLLADAPGRAAEIGQDLLRRYASVYHRAVMRGWADKLGLREVRETDAGLIDEFLGLLQRGRGDFTRSFRLLGRIRTDSDAPARGV----REAFADIN-----AFDAWVADYRTRLRSEQNVDDEARAGRMNRVNPKYVLRNHLAQIAIDKAMLGDYSEVARLAELLRRPYDEQPDMEAYAAEPP 492          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y4511_AZOVD (UPF0061 protein Avin_45110 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=Avin_45110 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.228e-22
Identity = 66/196 (33.67%), Postives = 102/196 (52.04%), Query Frame = -3
Query:  262 IGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEE-RKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 837
            I  WN++     L     +D       ++R+   F   +  +M ++LG       +++ I +LL  M    VDY+ FFR L +  A  ++        L+   +D+       + +W   ++  L     +DE  R+A M++VNPKY+LRNYL Q AI+AAE GD+  VR L  ++ RP+DEQPGME+YA  PP W
Sbjct:  295 IAHWNLSALGQALTP--FVDKDALLGSLKRFLPLFRGAWLELMRRRLGFTTAEADDRERIQRLLQLMQGSAVDYSRFFRELGDRPAAAALRR------LREDFVDLA-----GFDAWAGDHLARLARENEADEAARRARMHAVNPKYILRNYLAQQAIEAAERGDYSPVRELHAVLSRPFDEQPGMERYAERPPEW 477          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y486_PSEF5 (UPF0061 protein PFL_0486 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=PFL_0486 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.910e-22
Identity = 70/200 (35.00%), Postives = 109/200 (54.50%), Query Frame = -3
Query:  262 IGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQA----IMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEE-RKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 837
            IG WN++  +  L     ++      + E  G  F+  YQA    +M ++LG  +    +++++ +LL  M    VDY+ FFR L         PE + L  L+   +D     +  + +W   Y + +    I  ++ R+A M++VNP Y+LRNYL Q AIDAAE GD+ EVRRL +++ RP++EQPGM+ YA  PP W
Sbjct:  295 IGQWNLSALAQALTPFISVEA-----LRESLGL-FLPLYQAHYLDLMRRRLGFTQAEDDDQKLVERLLQLMQNSGVDYSLFFRRLGE-----HAPE-QALARLRDDFVD-----RNGFDAWAELYRERVARDPIQGQDLRRARMHAVNPLYILRNYLAQKAIDAAEAGDYSEVRRLHQVLSRPFEEQPGMDSYAERPPEW 477          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y185_AERS4 (UPF0061 protein ASA_0185 OS=Aeromonas salmonicida (strain A449) GN=ASA_0185 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.963e-22
Identity = 69/197 (35.03%), Postives = 95/197 (48.22%), Query Frame = -3
Query:  262 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 843
            P +G WN+ + +  LA    +D       + +Y  + M  Y  +M  KLGL ++ ++   +  +L   +A   VDY  F R L  V      P       L A+L D      + W  W+  Y   L   G  D  RKA M+++NPKYVLRN L Q AIDAAE GD  +  RLL  +++PYDEQP     A   P W
Sbjct:  281 PAVGYWNLQKLAQALAGH--VDGDALATSLAQYEHQLMLHYSELMRAKLGLTQWEEEDPALFRQLFQLLASQGVDYHLFLRRLGEVTGTGEWPAS-----LLALLPD-----PDLWQGWLELYRVRLTREGGEDAVRKAQMDAINPKYVLRNALAQQAIDAAEGGDMTQFERLLAALQQPYDEQPEYADLATPVPQW 465          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y369_PSEE4 (UPF0061 protein PSEEN0369 OS=Pseudomonas entomophila (strain L48) GN=PSEEN0369 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.482e-22
Identity = 65/195 (33.33%), Postives = 99/195 (50.77%), Query Frame = -3
Query:  262 IGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 837
            I  WN++  +  L    +I+ +     +  +   +   Y  +M ++LGL         ++ +LL  M    VDYT FFR L         P  E L  ++   +D+       + +W + Y+        + E R+  M +VNP YVLRNYL Q AI+AAE GD+ EVRRL +++ RP++EQPGM+ YA  PP W
Sbjct:  295 IAHWNLSALAQALTT--VIEVEPLKEALGLFLPLYQAHYLDLMRRRLGLTTAEDDDMALVERLLQRMQSGGVDYTLFFRKLGER------PVAEALKVVRDDFVDLA-----GFDAWGVEYLARCEREPGNAEGRRERMQAVNPLYVLRNYLAQKAIEAAEAGDYSEVRRLHQVLSRPFEEQPGMQAYAERPPEW 476          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1896_BURCM (UPF0061 protein Bamb_1896 OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=Bamb_1896 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.482e-22
Identity = 64/182 (35.16%), Postives = 98/182 (53.85%), Query Frame = -3
Query:  259 AAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLP---KYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 795
            A + +DD +A  V+ ++  +F    +  M  KLGL    + + ++ +KLL  M     D+T  FR L+ +    +  +     P++ + +D     ++A+ +W   Y + L      D  R A MN VNPKYVLRN+L + AI  A+  DF EV RL +++ RP+DEQP  E YA LPP WA
Sbjct:  343 AERAVDDAQA--VLAKFPERFGPALERAMRAKLGLELERENDAELANKLLETMHASHADFTLTFRRLAQLSKHDASRD----APVRDLFID-----RDAFDAWANLYRERLSEETRDDAARAAAMNRVNPKYVLRNHLAEVAIRRAKEKDFSEVERLAQVLRRPFDEQPEHEAYAALPPDWA 513          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1396_RALEJ (UPF0061 protein Reut_A1396 OS=Ralstonia eutropha (strain JMP134) GN=Reut_A1396 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.106e-21
Identity = 63/171 (36.84%), Postives = 92/171 (53.80%), Query Frame = -3
Query:  259 ERYGTKFMDEYQAIMTKKLGL------PKYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 753
            +RY ++F   Y+A    KLG+       K ++ +++ L   +    VDYT F+R L+ + +     +     P++ + LD     + AW +W  SY   L +    D  R+  M +VNPKYVLRN+L + AI  A   DF EV RLL ++ RP+DEQP  E YA LPP WA
Sbjct:  354 DRYASEFFRHYRA----KLGIHMPAGGDKEDEPLLTSLFQLLHEQHVDYTLFWRNLARISSADGSGD----APVRDLFLD-----RAAWDTWAESYRNRLRAEQSDDAARRVAMLAVNPKYVLRNHLAEIAIRRAREKDFSEVDRLLAVLSRPFDEQPEAEAYAALPPDWA 511          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y4038_DECAR (UPF0061 protein Daro_4038 OS=Dechloromonas aromatica (strain RCB) GN=Daro_4038 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.444e-21
Identity = 66/198 (33.33%), Postives = 99/198 (50.00%), Query Frame = -3
Query:  259 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 843
            P +  WN+   +          D     V E YG  F   ++ +M  KLGL      ++  I +    +   + D+T FFR LS +       + E +    A L D+  +R  A  +W+ ++   L  +   D ER+A M + NPKYVLRN+L ++AI  A+L D+ +V+RLL  + RPYDEQP  +  A LPP WA
Sbjct:  297 PHVAQWNLYCLADAFLPLLKHPDISRVAVDETYGDAFAQTFERLMCAKLGLRHALPDDENFIGETFGFLQQHRPDFTLFFRRLSRLSGGL---DGEAMAKADAPLRDLFVDRA-ACDAWLANWRARLAQTPWDDGERQASMLAANPKYVLRNWLAEAAIRKAKLKDYSDVQRLLTCLRRPYDEQPEFDDLAALPPDWA 490          
The following BLAST results are available for this feature:
BLAST of CX671974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 196
Match NameE-valueIdentityDescription
Y2935_VARPS1.000e-2236.68UPF0061 protein Vapar_2935 OS=Variovorax paradoxus... [more]
Y1931_VIBCH1.306e-2235.47UPF0061 protein VC_1931 OS=Vibrio cholerae GN=VC_1... [more]
Y585_METCA2.228e-2236.00UPF0061 protein MCA0585 OS=Methylococcus capsulatu... [more]
Y4511_AZOVD2.228e-2233.67UPF0061 protein Avin_45110 OS=Azotobacter vineland... [more]
Y486_PSEF52.910e-2235.00UPF0061 protein PFL_0486 OS=Pseudomonas fluorescen... [more]
Y185_AERS44.963e-2235.03UPF0061 protein ASA_0185 OS=Aeromonas salmonicida ... [more]
Y369_PSEE46.482e-2233.33UPF0061 protein PSEEN0369 OS=Pseudomonas entomophi... [more]
Y1896_BURCM6.482e-2235.16UPF0061 protein Bamb_1896 OS=Burkholderia ambifari... [more]
Y1396_RALEJ1.106e-2136.84UPF0061 protein Reut_A1396 OS=Ralstonia eutropha (... [more]
Y4038_DECAR1.444e-2133.33UPF0061 protein Daro_4038 OS=Dechloromonas aromati... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14C03_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14C03-E6-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671974 ID=CX671974; Name=CX671974; organism=Citrus sinensis; type=EST; length=845bp
TTTTTTTTTTTTTTTTTAAAATAAAAAATTGTAATAAATAAAATGATTTC
GAAATGCATAAACTGTTAAAATTCTGCAAAGAAATAATGCCATACAAATT
ATTTCTACTTTTTTCTGCAGCCACAAAAATAATAATAATAATAATGATTC
GACTATTATATACATGAAGTTACAATCCTCTTTCTGGTATAGGTATAACA
TAATGCAGAGAATGGCAGATTACGATGAACAGGAAAGCATGCAAACACCT
GGTCGATAAGCCCATGCCGGGGGCAGGCGAGCATACTTTTCCATTCCTGG
TTGCTCGTCATATGGGCGTTCCATAAGTTTAAGCAACCTCCGCACCTCAC
CAAAATCTCCGAGCTCAGCTGCATCGATAGCACTCTGGCACAAGTAGTTT
CTAAGAACATATTTTGGGTTCACAGAATTCATCAATGCCTTCCTTTCCTC
ATCTGAGATGCCACTAGACAACAGCTCTTGTATGTACGATAACACCCAGC
TGATCCATGCCTCCTTCCGCTCCTTTCCGATATCTAACAAAACAGCCTTC
AGTGGAACTAACAACTCATCCTCTGGAATGCTGGGATCAGCTTTGACATT
GGAAAGTGCACGAAAGAAATTTGTGTAATCAACTTTGTCAACAGCCATAT
TGTTTAGAAGTTTACTAATAATCTGTTTATTGTATTTTGGAAGACCAAGT
TTCTTTGTCATAATGGCTTGATATTCATCCATAAACTTTGTTCCATATCT
TTCCATGACATAATTTGCCTCTTTATCATCTATCAATTTAGCTGCTGCTA
GAGTTGTGGAAAACTGTGCAATGTTCCACAAGCCAATATCAGGCT
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