CX671967

Overview
NameCX671967
Unique NameCX671967
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671967 vs. ExPASy Swiss-Prot
Match: NACA_YARLI (Nascent polypeptide-associated complex subunit alpha OS=Yarrowia lipolytica GN=EGD2 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.708e-20
Identity = 56/158 (35.44%), Postives = 94/158 (59.49%), Query Frame = 3
Query:  270 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDL----------SSQLQTQAAE---------------QFKAPDLSHVVSKPESSAM-----AQDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMEL 653
            KL ++ + G++RV +K+++  +FVI+ P+V+K+PT ++YV+FGEA+ ED+          ++Q Q  AAE               +  + D + + +  E++++     A+D+ E D TG+E  DI+LVM QA VSR KA+  LK  D D+V+ IM+L
Sbjct:   39 KLNLQKVEGITRVVLKRTRQHIFVIANPEVYKTPTGNSYVVFGEAQHEDMQATARAAQIAAAQAQQAAAETGSVSEAAAAGEVGAELASKDPASITADLEAASLSKDEDAEDEAEADATGLEDSDIKLVMEQANVSRNKAINGLKKNDSDVVNTIMDL 196          
BLAST of CX671967 vs. ExPASy Swiss-Prot
Match: NACA_VANPO (Nascent polypeptide-associated complex subunit alpha OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=EGD2 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.409e-19
Identity = 58/144 (40.28%), Postives = 84/144 (58.33%), Query Frame = 3
Query:  270 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQL---------------QTQAAEQFKAPDLSHVVSKPESSAMAQDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 656
            KLG+K I G++RVT +K  N +F I  P+V++S   + YV+FGEAKI++ S +L               + Q   Q  A       +KP ++A   D+  VD   +  +DIELV +QA VS+ KA+KALK  +GDIV+AIM L+
Sbjct:   26 KLGLKKIAGINRVTFRKKDNQIFAIDNPEVYRSQGGN-YVVFGEAKIDNFSQKLAAAQEKIQSVSKSPEEIQKDMQLAADQAGDESAKPAAAAEEDDEAPVDAGDLSAEDIELVASQANVSKNKAIKALKEHNGDIVNAIMALS 168          
BLAST of CX671967 vs. ExPASy Swiss-Prot
Match: NACA_YEAST (Nascent polypeptide-associated complex subunit alpha OS=Saccharomyces cerevisiae GN=EGD2 PE=1 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 3.139e-19
Identity = 62/149 (41.61%), Postives = 88/149 (59.06%), Query Frame = 3
Query:  270 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQL---QTQAAEQFKAPDLSHVVSK-PE--------------SSAMAQDDEE--VDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 656
            KLG+K IPG+ RVT +K  N ++ I KP+VF+S     YV+FGEAK+++ + +L   Q QA      P    V +K PE              ++A  +DDEE  VD   +   DIELV+ Q  VS+ +A+KALKA +GD+V+AIM L+
Sbjct:   26 KLGLKQIPGIIRVTFRKKDNQIYAIEKPEVFRS-AGGNYVVFGEAKVDNFTQKLAAAQQQAQASGIMPSNEDVATKSPEDIQADMQAAAEGSVNAAAEEDDEEGEVDAGDLNKDDIELVVQQTNVSKNQAIKALKAHNGDLVNAIMSLS 173          
BLAST of CX671967 vs. ExPASy Swiss-Prot
Match: NACA_YEAS7 (Nascent polypeptide-associated complex subunit alpha OS=Saccharomyces cerevisiae (strain YJM789) GN=EGD2 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.139e-19
Identity = 62/149 (41.61%), Postives = 88/149 (59.06%), Query Frame = 3
Query:  270 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQL---QTQAAEQFKAPDLSHVVSK-PE--------------SSAMAQDDEE--VDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 656
            KLG+K IPG+ RVT +K  N ++ I KP+VF+S     YV+FGEAK+++ + +L   Q QA      P    V +K PE              ++A  +DDEE  VD   +   DIELV+ Q  VS+ +A+KALKA +GD+V+AIM L+
Sbjct:   26 KLGLKQIPGIIRVTFRKKDNQIYAIEKPEVFRS-AGGNYVVFGEAKVDNFTQKLAAAQQQAQASGIMPSNEDVATKSPEDIQADMQAAAEGSVNAAAEEDDEEGEVDAGDLNKDDIELVVQQTNVSKNQAIKALKAHNGDLVNAIMSLS 173          
BLAST of CX671967 vs. ExPASy Swiss-Prot
Match: NACA_CRYNE (Nascent polypeptide-associated complex subunit alpha OS=Cryptococcus neoformans GN=EGD2 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.099e-19
Identity = 55/158 (34.81%), Postives = 87/158 (55.06%), Query Frame = 3
Query:  261 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKA----------------------PDLSHVVSKPESSAMAQDDEEVDETG-----VEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMEL 653
            A+  LG+K + G+ RVT+++++N+L V+S P+V+KSP +D Y++FGEAK+ED +S  Q QA  Q  A                       +L       +SSA A   E  D +      V  ++I+L++ Q GV  AKA +A  +  GD+++AIM+L
Sbjct:   33 ALEGLGLKRVQGIQRVTLRRARNVLLVVSSPEVYKSPGSDCYIVFGEAKVEDPNSAAQLQAQAQLAASSQAAQQAHAHGGFKEGVPKSLEELMQDAPSTDSSAPAPSGEATDASASGDFKVSDEEIQLIVAQTGVDEAKAREAYISEKGDLINAIMKL 190          
BLAST of CX671967 vs. ExPASy Swiss-Prot
Match: NACA_CANGA (Nascent polypeptide-associated complex subunit alpha OS=Candida glabrata GN=EGD2 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.193e-18
Identity = 53/140 (37.86%), Postives = 85/140 (60.71%), Query Frame = 3
Query:  270 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQL---QTQAAEQFKAPDLSHVVSKPESSAMAQD--------DEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 656
            KLG+K +PG+ RVT +K  N +F I KP+VF+S     YV+FGEAK+++ + +L   Q QA  Q        + +  +++A+A +        +E+VD   +   DI+LV+ Q   ++ +A+KALK  +GDIV+AIM L+
Sbjct:   26 KLGLKKVPGIIRVTFRKKDNQIFAIEKPEVFRS-VGGNYVVFGEAKVDNFTQRLAAAQQQAQSQTATKTPEDIQADMQAAAVANENKTEGDAAEEDVDAGDLSNDDIDLVVQQTNATKGQAIKALKEHNGDIVNAIMSLS 164          
The following BLAST results are available for this feature:
BLAST of CX671967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NACA_YARLI3.708e-2035.44Nascent polypeptide-associated complex subunit alp... [more]
NACA_VANPO1.409e-1940.28Nascent polypeptide-associated complex subunit alp... [more]
NACA_YEAST3.139e-1941.61Nascent polypeptide-associated complex subunit alp... [more]
NACA_YEAS73.139e-1941.61Nascent polypeptide-associated complex subunit alp... [more]
NACA_CRYNE4.099e-1934.81Nascent polypeptide-associated complex subunit alp... [more]
NACA_CANGA1.193e-1837.86Nascent polypeptide-associated complex subunit alp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14B11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14B11-C22-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671967 ID=CX671967; Name=CX671967; organism=Citrus sinensis; type=EST; length=866bp
TTTCAAGGTCTTGAGGAATTTGCCTCTGTTTATCCCCAAGAACAGCCATG
ACTGCTCAGACCCAAGAAGAGCTTCTCGCCTCTCTTCTCGAACAGCAAAA
AATCGATGATGATAAGCCTGTTGTAGAAGATGATGAAGATGAAGACGAGG
ATGAGGATGAAGATGATGAGAAAGACGAAGATGAAGCTGACGAGGGACAC
CGAGATGGAGAGGCAGGTGGTAGGTCAAAACAGAGCAGAAGTGAAAAGAA
GAGTCGCAAAGCAATGTTAAAGCTTGGAATGAAACCTATCCCTGGTGTTA
GCCGGGTTACCGTCAAAAAGAGCAAGAATATCTTGTTTGTTATCTCAAAA
CCGGATGTTTTCAAGAGCCCGACAACAGATACATATGTAATCTTTGGTGA
GGCAAAGATCGAGGACTTGAGCTCACAATTGCAGACTCAGGCAGCAGAGC
AATTTAAGGCTCCTGATCTCAGCCACGTGGTCTCCAAACCTGAGTCATCA
GCCATGGCTCAGGACGATGAAGAAGTAGATGAGACCGGGGTTGAGCCTAA
GGACATAGAGTTAGTAATGACACAGGCAGGAGTCTCCAGGGCAAAGGCTG
TGAAAGCGCTGAAGGCTGCAGATGGGGACATAGTTTCAGCTATCATGGAG
CTTACCAACTGAGAGTTTTCTTAGATGTTTGTGTGCTGCTCACAAGAAAA
CATTTCACGCCACAGTATTCTTTATTACCAAATACCCAATATTGTCTGTG
GGAATTGAAGAGGAGAGAATCTGCAAAGCTGTTGATTGTGAAATGGAACT
GTTTGTGATTCCTTTTGCTTTGGCTGGGCAATTTACTTGTTTTTCTTTCA
TATGTGACTGGTTCCT
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