CX671960

Overview
NameCX671960
Unique NameCX671960
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length766
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX671960 vs. ExPASy Swiss-Prot
Match: CATA_CANBO (Peroxisomal catalase OS=Candida boidinii GN=CTA1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.513e-11
Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = -3 
Query:  615 EQLAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAP 761
            EQ AF P+  VPG+  SND +LQ+R+FSY DT RHRLG NY Q+PVN P
Sbjct:  317 EQAAFSPSHTVPGMEPSNDPVLQSRLFSYPDTHRHRLGVNYSQIPVNCP 365
[Close]
BLAST of CX671960 vs. ExPASy Swiss-Prot
Match: CAT3_NEUCR (Catalase-3 OS=Neurospora crassa GN=cat-3 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.813e-11
Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = -3 
Query:  582 EQLAFCPAIVVPGIYYSNDKLLQTRIFSYADTQ--RHRLGPNYLQLPVNAPKCAQHNNHYDG 761
            EQ++F P  +V G+ ++ D LLQ R++SY DTQ  RHR GPN+ QLP+N P    HNNH DG
Sbjct:  361 EQISFQPGHIVRGVDFTEDPLLQGRLYSYLDTQLNRHR-GPNFEQLPINRPVSGVHNNHRDG 421
The following BLAST results are available for this feature:
BLAST of CX671960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
CATA_CANBO7.513e-1163.27Peroxisomal catalase OS=Candida boidinii GN=CTA1 P... [more]
CAT3_NEUCR9.813e-1153.23Catalase-3 OS=Neurospora crassa GN=cat-3 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14B06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14B06-C12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671960 ID=CX671960; Name=CX671960; organism=Citrus sinensis; type=EST; length=766bp
TTTTTTTTTTTTTTTAACAGAAAAGTACTAATATGATTGTACTTTATACA
AATTTTGAGCGTACAACCAGCATTTATTTTAAGGAACATCATGTTTATGA
ATTACAGGACCAACATGTTTTTTTTAGTATTACAAAATAACACACCACCC
GAAAACGAATTCGCATTCCTTAAACTGCTGACGTCCTCTGTGTTTACTCC
TTGCTAACTCTTTCTAAATCACTCAGCTCCGCATCACCATTAAATGTTAG
GCCTCACATTCAGACGAGATGCCAACTTCTGACCCAGAGACTTGCAAGCC
TGAGACCAGTATGAGATCCATATGTGGCGGATCTCATGGGTGACGCGTGG
ATCAGATAAAGCATCAACCCATCTGCAGATGAATCGCTCTTGCCTGTCTG
GTGCCCAAGATCGGTATCTCTCTCCAGGTTGTTTGAAGTTGTTTTCCTTT
GGAATTATGCACTTCTCGCGCCTTCCGCCGCAGATTTCAGGAGGAGTTGG
ATGCATCTCAGCATGACGGACAGGATCATACCTTGAAGGGAAGTAATCGA
TCTCCTCATCCCTGTGCATGAAATTCATGAAACCGTCATAATGATTGTTG
TGCTGAGCACATTTGGGTGCATTTACTGGGAGTTGAAGATAGTTCGGCCC
TAGACGGTGCCTCTGAGTATCAGCATAGGAGAAGATTCGAGTCTGGAGCA
ACTTATCATTTGAATAGTAGATGCCAGGAACCACAATAGCAGGGCAGAAA
GCAAGCTGTTCATTCT
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