CX671958

Overview
NameCX671958
Unique NameCX671958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length652
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671958 vs. ExPASy Swiss-Prot
Match: DHH1_ASPTN (ATP-dependent RNA helicase dhh1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=dhh1 PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.175e-62
Identity = 119/171 (69.59%), Postives = 137/171 (80.12%), Query Frame = 2
Query:  140 SSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVQLLVGTPGRILDLSKKGVCILKD 652
            S   WK +LK P  D R +TEDVTATKG EFED+++KREL+MGIFE GFE+PSPIQEE+IP+ALTG DILARAKNGTGKTAAF IP LE+I+  +   Q +ILVPTRELALQTS VCK LGKHL I VMVTTGGT L DDI+RL   V +LVGTPGR+LDL+ KGV  L +
Sbjct:   19 SDAKWKDQLKTPAKDARPQTEDVTATKGLEFEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSHVCKTLGKHLGINVMVTTGGTGLMDDIIRLNDAVHILVGTPGRVLDLASKGVADLSE 189          
BLAST of CX671958 vs. ExPASy Swiss-Prot
Match: DHH1_GIBZE (ATP-dependent RNA helicase DHH1 OS=Gibberella zeae GN=DHH1 PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 5.415e-62
Identity = 119/170 (70.00%), Postives = 138/170 (81.18%), Query Frame = 2
Query:  143 SQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVQLLVGTPGRILDLSKKGVCILKD 652
            S +WK  L +P  D R +TEDVT TKG EFE++ LKR+LLMGIFE GFE+PSPIQEESIP+ALTG DILARAKNGTGKTAAF IP LE+I+   + IQ +ILVPTRELA+QTSQVCK LGKHL I VMVTTGGT L+DDI+RL  PV ++VGTPGRILDL+ K V  L +
Sbjct:   15 SDEWKKNLNLPAKDNRQQTEDVTNTKGLEFENFALKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKISKIQCLILVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTGLRDDIIRLQDPVHIVVGTPGRILDLAGKNVADLSE 184          
BLAST of CX671958 vs. ExPASy Swiss-Prot
Match: DHH1_PICGU (ATP-dependent RNA helicase DHH1 OS=Pichia guilliermondii GN=DHH1 PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 4.584e-61
Identity = 116/165 (70.30%), Postives = 137/165 (83.03%), Query Frame = 2
Query:  143 SQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVQLLVGTPGRILDLSKKGV 637
            S DWKA L IP  D+R +TEDVT T+G  FE++ LKRELLMGIFE GFE+PSPIQEESIP+AL G DILARAKNGTGKTA+F IPAL+++    N IQV+ILVPTRELALQTSQV K LGKHL +Q MVTTGGT L+DD+MRL +PV +LVGTPGR+LDL+ + +
Sbjct:    2 SDDWKANLNIPAKDSRPQTEDVTKTQGKSFEEFGLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPALQQVKTKLNKIQVLILVPTRELALQTSQVVKTLGKHLKLQCMVTTGGTLLRDDVMRLDEPVHILVGTPGRVLDLAARSI 166          
BLAST of CX671958 vs. ExPASy Swiss-Prot
Match: DHH1_KLULA (ATP-dependent RNA helicase DHH1 OS=Kluyveromyces lactis GN=DHH1 PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 4.584e-61
Identity = 115/171 (67.25%), Postives = 137/171 (80.12%), Query Frame = 2
Query:  140 SSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVQLLVGTPGRILDLSKKGVCILKD 652
            S+ DWK +L IP  DTR +T+DV  TKG  FED++LKRELLMGIFE GFE+PSPIQEE+IP+A+ G DILARAKNGTGKTAAF IP LEK+    N IQ +I+VPTRELALQTSQV + LGKH  I  MVTTGGT+L+DDIMRL +PV +LVGTPGR+LDL+ + V  L +
Sbjct:    8 SNNDWKTQLNIPKKDTRPQTDDVLNTKGRSFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAIAGKDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDIMRLNEPVHILVGTPGRVLDLASRRVTDLSE 178          
BLAST of CX671958 vs. ExPASy Swiss-Prot
Match: DHH1_PICST (ATP-dependent RNA helicase DHH1 OS=Pichia stipitis GN=DHH1 PE=3 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 5.987e-61
Identity = 118/171 (69.01%), Postives = 137/171 (80.12%), Query Frame = 2
Query:  140 SSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVQLLVGTPGRILDLSKKGVCILKD 652
            S Q+WK  L +P  DTR +TEDV  TKG  FED+ LKRELLMGIFE GFE+PSPIQEESIP+AL G D+LARAKNGTGKTA+F IP+L++I    N IQ +ILVPTRELALQTSQV + LGKHL IQ MVTTGGTSLKDDI+RL  PV +LVGTPGR+LDL+ + V  L +
Sbjct:    2 SEQNWKQNLNLPQRDTRPQTEDVLNTKGKSFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDVLARAKNGTGKTASFIIPSLQQIKPKLNKIQALILVPTRELALQTSQVVRTLGKHLGIQCMVTTGGTSLKDDILRLNDPVHVLVGTPGRVLDLAARSVADLSE 172          
BLAST of CX671958 vs. ExPASy Swiss-Prot
Match: DHH1_YEAST (ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae GN=DHH1 PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.021e-60
Identity = 115/169 (68.05%), Postives = 136/169 (80.47%), Query Frame = 2
Query:  146 QDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVQLLVGTPGRILDLSKKGVCILKD 652
            +DWK  L IP  DTR +T+DV  TKGN FED++LKRELLMGIFE GFE+PSPIQEE+IP+A+TG DILARAKNGTGKTAAF IP LEK+    N IQ +I+VPTRELALQTSQV + LGKH  I  MVTTGGT+L+DDI+RL + V +LVGTPGR+LDL+ + V  L D
Sbjct:   20 RDWKTALNIPKKDTRPQTDDVLNTKGNTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSD 188          
BLAST of CX671958 vs. ExPASy Swiss-Prot
Match: DHH1_YEAS7 (ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae (strain YJM789) GN=DHH1 PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.021e-60
Identity = 115/169 (68.05%), Postives = 136/169 (80.47%), Query Frame = 2
Query:  146 QDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVQLLVGTPGRILDLSKKGVCILKD 652
            +DWK  L IP  DTR +T+DV  TKGN FED++LKRELLMGIFE GFE+PSPIQEE+IP+A+TG DILARAKNGTGKTAAF IP LEK+    N IQ +I+VPTRELALQTSQV + LGKH  I  MVTTGGT+L+DDI+RL + V +LVGTPGR+LDL+ + V  L D
Sbjct:   20 RDWKTALNIPKKDTRPQTDDVLNTKGNTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSD 188          
BLAST of CX671958 vs. ExPASy Swiss-Prot
Match: DHH1_CRYNE (ATP-dependent RNA helicase DHH1 OS=Cryptococcus neoformans GN=DHH1 PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.021e-60
Identity = 116/169 (68.64%), Postives = 139/169 (82.25%), Query Frame = 2
Query:  143 SQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDDIMRLYQPVQLLVGTPGRILDLSKKGVCIL 646
            + DWK  L  PP D R +TEDVTAT+G+ FED+ L+RELLMGI+  GFERPSPIQE++IP+ALTG DILARAKNGTGKTA+F IP L +I+   + IQ +ILVPTRELALQTSQVCK LG H+ N+QVM+TTGGT+L+DDI+RL QPV +LVGTPGRILDL  KG+  L
Sbjct:    9 NDDWKQGLAAPPKDLRPQTEDVTATQGSRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTTLRDDILRLQQPVHILVGTPGRILDLGSKGIASL 177          
BLAST of CX671958 vs. ExPASy Swiss-Prot
Match: DHH1_CRYNV (ATP-dependent RNA helicase VAD1 OS=Cryptococcus neoformans var. grubii GN=VAD1 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.334e-60
Identity = 115/167 (68.86%), Postives = 139/167 (83.23%), Query Frame = 2
Query:  140 SSQDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDDIMRLYQPVQLLVGTPGRILDLSKKGV 637
            ++ DWK  L  PP D R +TEDVTAT+G+ FED+ L+RELLMGI+  GFERPSPIQE++IP+ALTG DILARAKNGTGKTA+F IP L +I+   + IQ +ILVPTRELALQTSQVCK LG H+ N+QVM+TTGGT+L+DDI+RL QPV +LVGTPGRILDL  KG+
Sbjct:    8 ANDDWKQGLAAPPKDLRPQTEDVTATQGSRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTTLRDDILRLQQPVHILVGTPGRILDLGSKGI 174          
BLAST of CX671958 vs. ExPASy Swiss-Prot
Match: DHH1_NEUCR (ATP-dependent RNA helicase dhh-1 OS=Neurospora crassa GN=dhh-1 PE=3 SV=2)

HSP 1 Score: 231.491 bits (589), Expect = 2.971e-60
Identity = 116/169 (68.64%), Postives = 137/169 (81.07%), Query Frame = 2
Query:  146 QDWKARLKIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVQLLVGTPGRILDLSKKGVCILKD 652
            +DWK  L +P  DTR +TEDVT T+G ++ED+   R+LLMGIFE GFE+PSPIQEE+IP+ALTG DILARAKNGTGKTAAF IPAL KI+   + IQ +ILVPTRELA+QTSQVCK LGKHL I VMVTTGGT L+DDI+RL  PV ++VGTPGRILDL+ K V  L +
Sbjct:   19 EDWKKGLNLPARDTRQQTEDVTNTRGLDWEDFIHDRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALNKINPKVSKIQCLILVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTGLRDDIVRLQDPVHIVVGTPGRILDLAGKQVADLSE 187          
The following BLAST results are available for this feature:
BLAST of CX671958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DHH1_ASPTN3.175e-6269.59ATP-dependent RNA helicase dhh1 OS=Aspergillus ter... [more]
DHH1_GIBZE5.415e-6270.00ATP-dependent RNA helicase DHH1 OS=Gibberella zeae... [more]
DHH1_PICGU4.584e-6170.30ATP-dependent RNA helicase DHH1 OS=Pichia guillier... [more]
DHH1_KLULA4.584e-6167.25ATP-dependent RNA helicase DHH1 OS=Kluyveromyces l... [more]
DHH1_PICST5.987e-6169.01ATP-dependent RNA helicase DHH1 OS=Pichia stipitis... [more]
DHH1_YEAST1.021e-6068.05ATP-dependent RNA helicase DHH1 OS=Saccharomyces c... [more]
DHH1_YEAS71.021e-6068.05ATP-dependent RNA helicase DHH1 OS=Saccharomyces c... [more]
DHH1_CRYNE1.021e-6068.64ATP-dependent RNA helicase DHH1 OS=Cryptococcus ne... [more]
DHH1_CRYNV1.334e-6068.86ATP-dependent RNA helicase VAD1 OS=Cryptococcus ne... [more]
DHH1_NEUCR2.971e-6068.64ATP-dependent RNA helicase dhh-1 OS=Neurospora cra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14B05_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14B05-C10-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671958 ID=CX671958; Name=CX671958; organism=Citrus sinensis; type=EST; length=652bp
CCACAACCAGCAATTTCAGCAGCAGCAGCAACAACAACAACAGCAGCAGT
GGCTACGGCGGAACAATTTTCCTGGCGCTGATTCCTCCATTGTTGATGAG
GTCGAGAAGACCGTACAGTCCGAAGCTGCCGTCGACCCGAGTTCCCAAGA
TTGGAAGGCACGGCTAAAGATACCACCCGCTGATACACGCTACAGAACTG
AGGATGTTACGGCCACAAAAGGAAATGAATTTGAGGACTATTTTCTTAAA
CGTGAGCTACTTATGGGAATATTTGAAAAAGGGTTTGAAAGGCCATCACC
TATTCAGGAAGAAAGTATTCCTATTGCTTTAACGGGTAGCGATATTCTTG
CCAGAGCTAAGAATGGTACCGGGAAGACAGCTGCCTTCTGCATTCCAGCA
TTGGAAAAGATTGACCAAGATAACAATGTGATTCAAGTTGTTATCCTTGT
TCCAACAAGAGAGTTGGCTCTTCAGACATCCCAAGTCTGTAAGGAGCTGG
GGAAGCATTTGAATATTCAAGTCATGGTTACCACTGGTGGAACCAGTCTT
AAGGATGATATTATGCGTTTGTATCAACCTGTTCAATTGCTTGTTGGAAC
TCCTGGAAGAATACTAGATCTTTCTAAGAAGGGTGTTTGCATTTTGAAAG
AT
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