CX671958
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671958 vs. ExPASy Swiss-Prot
Match: IF4A_SCLS1 (ATP-dependent RNA helicase eIF4A OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=tif1 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.260e-26 Identity = 59/136 (43.38%), Postives = 89/136 (65.44%), Query Frame = 2 Query: 224 NEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVQLLVGTPGRILDLSKK 631 + F+ LK ELL G++ GFERPS IQ+ +I + G D++A+A++GTGKTA F I L+K+D + Q +IL PTRELA Q +V +G +N++ GGTS++DD+ L Q++VGTPGR+ D+ ++ Sbjct: 25 DSFDTMNLKPELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKLDPNVKQCQALILAPTRELAQQIQKVVVAIGDFMNVECHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQR 160
BLAST of CX671958 vs. ExPASy Swiss-Prot
Match: IF4A_BOTFB (ATP-dependent RNA helicase eIF4A OS=Botryotinia fuckeliana (strain B05.10) GN=tif1 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.260e-26 Identity = 59/136 (43.38%), Postives = 89/136 (65.44%), Query Frame = 2 Query: 224 NEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVQLLVGTPGRILDLSKK 631 + F+ LK ELL G++ GFERPS IQ+ +I + G D++A+A++GTGKTA F I L+K+D + Q +IL PTRELA Q +V +G +N++ GGTS++DD+ L Q++VGTPGR+ D+ ++ Sbjct: 25 DSFDTMNLKPELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKLDPNVKQCQALILAPTRELAQQIQKVVVAIGDFMNVECHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQR 160
BLAST of CX671958 vs. ExPASy Swiss-Prot
Match: IF4A_AJECN (ATP-dependent RNA helicase eIF4A OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=TIF1 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.260e-26 Identity = 62/157 (39.49%), Postives = 98/157 (62.42%), Query Frame = 2 Query: 167 KIPPADTRYRTEDVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVQLLVGTPGRILDLSKKGV 637 +IP +++T + F+ L+ ELL G++ GFERPS IQ+ +I + GSD++A+A++GTGKTA F I AL+K+D + Q +IL PTRELA Q +V +G ++I+ GG S+++D+ L Q++VGTPGR+ D+ ++ V Sbjct: 10 EIPEGQIESNYDEIT----DSFDAMNLRAELLRGVYAYGFERPSAIQQRAIMPVIKGSDVIAQAQSGTGKTATFSISALQKVDTNLKACQALILAPTRELAQQIQKVVVAIGDFMSIECHACIGGISVREDMKALQDGPQVVVGTPGRVHDMIQRRV 162
BLAST of CX671958 vs. ExPASy Swiss-Prot
Match: FAL1_YARLI (ATP-dependent RNA helicase FAL1 OS=Yarrowia lipolytica GN=FAL1 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.260e-26 Identity = 68/144 (47.22%), Postives = 87/144 (60.42%), Query Frame = 2 Query: 203 DVTATKGNEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVQLLVGTPGRILDLSKKG 634 DVT T FE LK +LL GI+ GFE PS IQ +I + G D +A+A++GTGKTA F I LE ID + Q ++L PTRELA Q V LG ++N+Q GGTSL D+ +L Q++ GTPGR LD+ KKG Sbjct: 21 DVTPT----FESMDLKDDLLRGIYAYGFEAPSAIQSRAITQIIKGRDTIAQAQSGTGKTATFSISMLEVIDTKHRETQAMVLSPTRELATQIQSVILALGDYMNVQCHACIGGTSLSVDMKKLEAGQQVVSGTPGRCLDMIKKG 160
BLAST of CX671958 vs. ExPASy Swiss-Prot
Match: IF4A_PHANO (ATP-dependent RNA helicase eIF4A OS=Phaeosphaeria nodorum GN=TIF1 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.646e-26 Identity = 60/138 (43.48%), Postives = 89/138 (64.49%), Query Frame = 2 Query: 224 NEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVQLLVGTPGRILDLSKKGV 637 + F+ LK ELL G++ GFERPS IQ+ +I + G D++A+A++GTGKTA F I L+KID + Q +IL PTRELA Q +V +G +++ GGTS++DD+ L Q++VGTPGR+ D+ ++ V Sbjct: 23 DSFDAMNLKAELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISTLQKIDSNVKACQALILAPTRELAQQIQKVVVAIGDFMDVACHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQRRV 160
BLAST of CX671958 vs. ExPASy Swiss-Prot
Match: FAL1_PICST (ATP-dependent RNA helicase FAL1 OS=Pichia stipitis GN=FAL1 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.646e-26 Identity = 63/134 (47.01%), Postives = 85/134 (63.43%), Query Frame = 2 Query: 230 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVQLLVGTPGRILDLSKK 631 FE LK +LL GI+ GFE PS IQ +I + G D +A+A++GTGKTA F I L+ ID + Q +IL PTRELA+Q V K LG ++NI GGT + DDI +L Q Q++ GTPGR++D+ K+ Sbjct: 28 FESMNLKPDLLKGIYGYGFEAPSAIQSRAIMQIINGRDTIAQAQSGTGKTATFSIGMLQAIDTNAKDCQALILSPTRELAVQIQNVVKHLGDYMNIHTHACIGGTHVGDDIKKLKQGQQIVSGTPGRVVDMVKR 161
BLAST of CX671958 vs. ExPASy Swiss-Prot
Match: FAL1_CANAL (ATP-dependent RNA helicase FAL1 OS=Candida albicans GN=FAL1 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.646e-26 Identity = 64/144 (44.44%), Postives = 90/144 (62.50%), Query Frame = 2 Query: 212 ATKG----NEFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVQLLVGTPGRILDLSKK 631 +TKG FE LK +LL GI+ GFE PS IQ +I ++G D +A+A++GTGKTA F I LE ID + Q +IL PTRELA+Q V K LG ++NI GG ++ +D+ +L Q Q++ GTPGR++D+ K+ Sbjct: 18 STKGIKVHRTFESMNLKPDLLKGIYAYGFETPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSIGMLEVIDTKSKECQALILSPTRELAIQIQNVVKHLGDYMNIHTHACIGGKNVGEDVKKLQQGQQIVSGTPGRVIDVIKR 161
BLAST of CX671958 vs. ExPASy Swiss-Prot
Match: FAL1_DEBHA (ATP-dependent RNA helicase FAL1 OS=Debaryomyces hansenii GN=FAL1 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.149e-26 Identity = 62/134 (46.27%), Postives = 85/134 (63.43%), Query Frame = 2 Query: 230 FEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVQLLVGTPGRILDLSKK 631 FE LK +LL GI+ GFE PS IQ +I ++G D +A+A++GTGKTA F I LE ID + Q +IL PTRELA Q V K LG ++N+ GGT + +DI +L Q Q++ GTPGR++D+ K+ Sbjct: 28 FESMNLKTDLLKGIYGYGFEAPSAIQSRAIMQIISGKDTIAQAQSGTGKTATFSIGMLEVIDTKSKDCQALILSPTRELAQQIQSVVKHLGDYMNVHTHACIGGTHVGEDIKKLQQGQQIVSGTPGRVVDMIKR 161
BLAST of CX671958 vs. ExPASy Swiss-Prot
Match: EXP9_STRR6 (Probable ATP-dependent RNA helicase exp9 OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=exp9 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.149e-26 Identity = 60/142 (42.25%), Postives = 90/142 (63.38%), Query Frame = 2 Query: 227 EFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVQLLVGTPGRILDLSKKGVCILKD 652 +F + L +LL I + GF SPIQE++IP+AL G D++ +A+ GTGKTAAF +P LEKI + IQ +++ PTRELA+Q+ + G+ ++V GG+S++ I L ++VGTPGR+LDL K+ L+D Sbjct: 2 KFNELNLSADLLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTLEKIRTEEATIQALVIAPTRELAVQSQEELFRFGRSKGVKVRSVYGGSSIEKQIKALKSGAHIVVGTPGRLLDLIKRKALKLQD 143
BLAST of CX671958 vs. ExPASy Swiss-Prot
Match: EXP9_STRPN (Probable ATP-dependent RNA helicase exp9 OS=Streptococcus pneumoniae GN=exp9 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.149e-26 Identity = 60/142 (42.25%), Postives = 90/142 (63.38%), Query Frame = 2 Query: 227 EFEDYFLKRELLMGIFEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVQLLVGTPGRILDLSKKGVCILKD 652 +F + L +LL I + GF SPIQE++IP+AL G D++ +A+ GTGKTAAF +P LEKI + IQ +++ PTRELA+Q+ + G+ ++V GG+S++ I L ++VGTPGR+LDL K+ L+D Sbjct: 2 KFNELNLSADLLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTLEKIRTEEATIQALVIAPTRELAVQSQEELFRFGRSKGVKVRSVYGGSSIEKQIKALKSGAHIVVGTPGRLLDLIKRKALKLQD 143 The following BLAST results are available for this feature:
BLAST of CX671958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671958 ID=CX671958; Name=CX671958; organism=Citrus sinensis; type=EST; length=652bpback to top |