CX671956

Overview
NameCX671956
Unique NameCX671956
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX671956 vs. ExPASy Swiss-Prot
Match: PP1_BRAOL (Serine/threonine-protein phosphatase PP1 OS=Brassica oleracea GN=PP1 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.314e-53
Identity = 92/125 (73.60%), Postives = 110/125 (88.00%), Query Frame = -3 
Query:  472 P*LAQFEPDKELPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKK 846
            P L   +  + + RP D+P+SGL+CDLLWSDPS D+KGW ANDRGVSY FGAD V EFLQK+D++LICRAHQVVEDGYEFFA R+++T+FSAPNYCGEFDNAGAMMS+DE+LMCSFQILKP++KK
Sbjct:  192 PELMSLDQIRSISRPLDIPDSGLVCDLLWSDPSGDVKGWGANDRGVSYTFGADTVAEFLQKNDMDLICRAHQVVEDGYEFFAERQVVTVFSAPNYCGEFDNAGAMMSIDESLMCSFQILKPSEKK 316
[Close]
BLAST of CX671956 vs. ExPASy Swiss-Prot
Match: PP16_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 6 OS=Arabidopsis thaliana GN=TOPP6 PE=2 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 7.358e-53
Identity = 93/144 (64.58%), Postives = 115/144 (79.86%), Query Frame = -3 
Query:  415 P*LAQFEPDKELPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKFSFGSTTTVKSGAPPSR 846
            P +   +  + +PRP DVP+ G+LCDLLW+DP  +I+GW  NDRGVSY FGAD+V EFLQ HDL+LICRAHQVVEDGYEFFA R+L+TIFSAPNYCGEFDNAGA+MSVD++L CSFQILK ++KK +F F +    + G PP +
Sbjct:  175 PDIKSLDDIRRIPRPIDVPDQGILCDLLWADPDREIQGWGENDRGVSYTFGADKVAEFLQTHDLDLICRAHQVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGALMSVDDSLTCSFQILKASEKKGRFGFNNNVP-RPGTPPHK 317
[Close]
BLAST of CX671956 vs. ExPASy Swiss-Prot
Match: PP11_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Arabidopsis thaliana GN=TOPP1 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.639e-52
Identity = 93/128 (72.66%), Postives = 110/128 (85.94%), Query Frame = -3 
Query:  463 P*LAQFEPDKELPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKF 846
            P L   +  + + RP D+PESGL+CDLLWSDPS D+ GW  NDRGVSY FGAD+V EFL+KHD++LICRAHQVVEDGYEFFA R+L+T+FSAPNYCGEFDNAGAMMS+DE+LMCSFQILKP++KK  F
Sbjct:  191 PELKSLDQIRNIARPMDIPESGLVCDLLWSDPSGDV-GWGMNDRGVSYTFGADKVAEFLEKHDMDLICRAHQVVEDGYEFFAERQLVTVFSAPNYCGEFDNAGAMMSIDESLMCSFQILKPSEKKSPF 317
[Close]
BLAST of CX671956 vs. ExPASy Swiss-Prot
Match: PP1_NEUCR (Serine/threonine-protein phosphatase PP1 OS=Neurospora crassa GN=ppp-1 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.141e-52
Identity = 93/128 (72.66%), Postives = 108/128 (84.38%), Query Frame = -3 
Query:  463 P*LAQFEPDKELPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKF 846
            P L   E  + + RPTD+P+ GLLCDLLWSDP  DI GW  NDRGVS+ FG D V+ FLQKHD++LICRAHQVVEDGYEFF+ R+L+T+FSAPNYCGEFDNAGAMMSVDE+L+CSFQILKPA+KK KF
Sbjct:  178 PDLNSMEQIRRVMRPTDIPDCGLLCDLLWSDPDKDITGWSENDRGVSFTFGPDVVSRFLQKHDMDLICRAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGAMMSVDESLLCSFQILKPAEKKQKF 305
[Close]
BLAST of CX671956 vs. ExPASy Swiss-Prot
Match: GLC7A_CAEEL (Serine/threonine-protein phosphatase PP1-alpha OS=Caenorhabditis elegans GN=gsp-1 PE=2 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 2.796e-52
Identity = 95/141 (67.38%), Postives = 112/141 (79.43%), Query Frame = -3 
Query:  424 P*LAQFEPDKELPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKFSFGSTTTVKSGAP 846
            P L   E  + + RPTDVP++GLLCDLLWSDP  D+ GW  NDRGVS+ FG D V +FL +HDL+LICRAHQVVEDGYEFFA R+L+T+FSAPNYCGEFDNAG MMSVDETLMCSFQILKP++KK K+ +     + SG P
Sbjct:  178 PDLQNMEQIRRVMRPTDVPDTGLLCDLLWSDPDKDVTGWGENDRGVSFTFGPDVVAKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYQG---MNSGRP 315
[Close]
BLAST of CX671956 vs. ExPASy Swiss-Prot
Match: GLC7A_CAEBR (Serine/threonine-protein phosphatase PP1-alpha OS=Caenorhabditis briggsae GN=gsp-1 PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.796e-52
Identity = 95/141 (67.38%), Postives = 112/141 (79.43%), Query Frame = -3 
Query:  424 P*LAQFEPDKELPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKFSFGSTTTVKSGAP 846
            P L   E  + + RPTDVP++GLLCDLLWSDP  D+ GW  NDRGVS+ FG D V +FL +HDL+LICRAHQVVEDGYEFFA R+L+T+FSAPNYCGEFDNAG MMSVDETLMCSFQILKP++KK K+ +     + SG P
Sbjct:  178 PDLQNMEQIRRVMRPTDVPDTGLLCDLLWSDPDKDVTGWGENDRGVSFTFGPDVVAKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYQG---MNSGRP 315
[Close]
BLAST of CX671956 vs. ExPASy Swiss-Prot
Match: PPIG_XENTR (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Xenopus tropicalis GN=ppp1cc PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.652e-52
Identity = 94/125 (75.20%), Postives = 106/125 (84.80%), Query Frame = -3 
Query:  472 P*LAQFEPDKELPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKK 846
            P L   E  + + RPTDVP+ GLLCDLLWSDP  D+ GW  NDRGVS+ FGA+ V +FL KHDL+LICRAHQVVEDGYEFFA R+L+T+FSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA+KK
Sbjct:  178 PDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKK 302
[Close]
BLAST of CX671956 vs. ExPASy Swiss-Prot
Match: PP1G_RAT (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Rattus norvegicus GN=Ppp1cc PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.652e-52
Identity = 94/125 (75.20%), Postives = 106/125 (84.80%), Query Frame = -3 
Query:  472 P*LAQFEPDKELPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKK 846
            P L   E  + + RPTDVP+ GLLCDLLWSDP  D+ GW  NDRGVS+ FGA+ V +FL KHDL+LICRAHQVVEDGYEFFA R+L+T+FSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA+KK
Sbjct:  178 PDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKK 302
[Close]
BLAST of CX671956 vs. ExPASy Swiss-Prot
Match: PP1G_MOUSE (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Mus musculus GN=Ppp1cc PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.652e-52
Identity = 94/125 (75.20%), Postives = 106/125 (84.80%), Query Frame = -3 
Query:  472 P*LAQFEPDKELPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKK 846
            P L   E  + + RPTDVP+ GLLCDLLWSDP  D+ GW  NDRGVS+ FGA+ V +FL KHDL+LICRAHQVVEDGYEFFA R+L+T+FSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA+KK
Sbjct:  178 PDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKK 302
[Close]
BLAST of CX671956 vs. ExPASy Swiss-Prot
Match: PP1G_HUMAN (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Homo sapiens GN=PPP1CC PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.652e-52
Identity = 94/125 (75.20%), Postives = 106/125 (84.80%), Query Frame = -3 
Query:  472 P*LAQFEPDKELPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKK 846
            P L   E  + + RPTDVP+ GLLCDLLWSDP  D+ GW  NDRGVS+ FGA+ V +FL KHDL+LICRAHQVVEDGYEFFA R+L+T+FSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA+KK
Sbjct:  178 PDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKK 302
The following BLAST results are available for this feature:
BLAST of CX671956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
PP1_BRAOL4.314e-5373.60Serine/threonine-protein phosphatase PP1 OS=Brassi... [more]
PP16_ARATH7.358e-5364.58Serine/threonine-protein phosphatase PP1 isozyme 6... [more]
PP11_ARATH1.639e-5272.66Serine/threonine-protein phosphatase PP1 isozyme 1... [more]
PP1_NEUCR2.141e-5272.66Serine/threonine-protein phosphatase PP1 OS=Neuros... [more]
GLC7A_CAEEL2.796e-5267.38Serine/threonine-protein phosphatase PP1-alpha OS=... [more]
GLC7A_CAEBR2.796e-5267.38Serine/threonine-protein phosphatase PP1-alpha OS=... [more]
PPIG_XENTR3.652e-5275.20Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1G_RAT3.652e-5275.20Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1G_MOUSE3.652e-5275.20Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1G_HUMAN3.652e-5275.20Serine/threonine-protein phosphatase PP1-gamma cat... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14B04_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14B04-C8-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671956 ID=CX671956; Name=CX671956; organism=Citrus sinensis; type=EST; length=863bp
ACAACACATTCATCCCCATTATGATTACATAATACATACACCCCTGTGAA
TTTTTTCATGCTGTGATTATGATACAATACGGCTTCTAAGGAAGAAGCTG
AACAGAGAGGAGTCACGAGAGGCCACAACTTACAGCTTGTGTAGCACTCA
TAATGTACAGAGGGTGAGCAAAACAAAAAAAGATTACATCTTCCGAAAAA
ATTTTCTGGAGGAACATCCTTTATCCTCTGCTGCTCAACAAGGTTGACAA
CACCAACGGTTTGCCTCGTTGGGACATACTCTTGGAACCCAGATTTGTTA
GATTGCTATTTCTCACGATGTTCTATACATCCTTGATCTAATACAGCTAC
TTTCTTCAGAAAGCTCCATTTTAGATCAAGCTTATTAAACCTTTGCACCA
AGAAACGACTTCATTCTACTTGGAGGAGCACCTGACTTAACTGTAGTCGT
GCTCCCAAAACTGAACTTTGGCTTCTTATCTGCAGGCTTTAATATCTGAA
AAGAACACATTAGTGTCTCATCCACGCTCATCATTGCACCAGCATTGTCA
AACTCTCCACAGTAATTAGGTGCTGAAAATATAGTTATGAGCCGTCTATT
AGCAAAAAATTCATATCCATCTTCCACAACCTGGTGGGCCCGACAAATTA
ACTCGAGATCGTGCTTCTGAAGAAACTCTGTCACTCTATCAGCACCAAAG
ACATATGAAACTCCTCTATCATTTGCTTCCCAACCTTTAATGTCGTTACT
GGGATCCGACCATAGGAGATCGCAGAGCAAACCACTTTCTGGGACATCAG
TAGGTCGAGGTAACTCCTTATCTGGTTCAAATTGTGCAAGTCAGGGGAAA
GTCCACCATGCAT
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