CX671912

Overview
NameCX671912
Unique NameCX671912
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX671912 vs. ExPASy Swiss-Prot
Match: WRK51_ARATH (Probable WRKY transcription factor 51 OS=Arabidopsis thaliana GN=WRKY51 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.871e-11
Identity = 33/65 (50.77%), Postives = 41/65 (63.08%), Query Frame = -1 
Query:  314 SKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRH 508
            SKI D+  D + WRKYG+K +K +   R YYKCS+  GC  +K VER  DD   +I TYEG H H
Sbjct:  104 SKI-DVMDDGFKWRKYGKKSVKNNINKRNYYKCSS-EGCSVKKRVERDGDDAAYVITTYEGVHNH 166
The following BLAST results are available for this feature:
BLAST of CX671912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
WRK51_ARATH7.871e-1150.77Probable WRKY transcription factor 51 OS=Arabidops... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_13H04_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13H04-O7-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671912 ID=CX671912; Name=CX671912; organism=Citrus sinensis; type=EST; length=934bp
TTTTGCACATAATAAAACAATCCCATATCATATAACTACCGAATGACAAT
TTAATTAATTAATTAATTAATTTTTTTTTTTAAATTTTACTCCAACAAAA
TTTACATTAATACCCTCCATCCGACCTTCCATCGGCCCCGCAACAACATC
GATATTAGAAAATGCTACCGCGTCTTGTCATTATCTTCCCACCCACCTTC
CTTTATCAATTCTCTCTCTCTCTACTTTTTCTTTTTTGTTCATTTTCTCA
CGTTGACTCGAAAACCAAACCCACTCCAGCAGGGGCCGCGTTCTCCTGCA
TCGCGGCCTGCGAATGCCGGTGCTCTCCTTCGTACGTCACAATCAGCATC
GTTGGATCGTCTGGTGCCCTCTCCACGTGTTTCCTGGCTGGGCACCCTCT
CATTGTACTGCACTTGTAATAGCCGCGTGGGTATGGTGAGCCCTTGATCG
GCTTTTGACCATACTTCCTCCAAGAATACTCGTCCGGTGGAATATCGGCT
ATTTTTGAACTAATCGCCGGCACTCTAATAGTTTTCTTTACTCGGTTTTT
CCTGAAATCAATTAAAAAAAAATAAATTAGACGTCAACTATTTCTTCCCA
ATATCTCACTATCGTACGCTGTTGGTGCAATCTATTATGAGCTGTGCGTG
TTCTGTCTACGGTCTACGCTAACTCCTAACTGTGTCAAAGTCAAAATCAA
CGTAACCAAGTCTAAGCACGCCTCAGAAAAATGGGAAAATGACAAAACTA
ACACAAATTTCAATACTTTTTTTATTCGAGTCTTTATTGACATCGTTAGG
CGTGCGCTGTCTACTCCTTCGCAGCTATGCGTTTACCCAACAACTCGTTG
ACCGGTAACTCGACCGATTTCTCAGATCGAGTCCGATTCCAACCGTCTCN
AACTCGACCGAATTTCGTAAATAACAAACAAAAT
back to top