CX671895

Overview
NameCX671895
Unique NameCX671895
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671895 vs. ExPASy Swiss-Prot
Match: LLDD_CAUSK (L-lactate dehydrogenase [cytochrome] OS=Caulobacter sp. (strain K31) GN=lldD PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.263e-29
Identity = 81/222 (36.49%), Postives = 115/222 (51.80%), Query Frame = -1
Query:  170 AIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSGLAAYVAGQ--------------IDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITR 772
            A+  TVD P  G R  D  +  T P     +  Q +       D+G M   +  G  A V G+               D S+ WKD+ W++   K P+++KGVL  ED             VSNHG RQLD V ++  AL ++ +A   R+ V  DGGVR G DV + LALGA G+ +GR  VY+LAA G  GV ++L+++ +E  +AMAL+G  +L +I R
Sbjct:  151 ALVFTVDMPVPGARYRDAHSGMTGPNAAMRRLVQAVFKPGWAWDVGVMGRPHTLGNVAPVLGENTGLEDFMGWLGANFDPSIQWKDLDWIRDQWKGPLILKGVLDPEDAKAAADIGADGIVVSNHGGRQLDGVLSSARALPDIAEAVGDRLTVLADGGVRSGLDVVRMLALGAKGVLLGRAFVYALAARGGPGVSQLLDLIEKEMRVAMALTGVNTLDQIDR 372          
BLAST of CX671895 vs. ExPASy Swiss-Prot
Match: LLDD_XANP2 (L-lactate dehydrogenase [cytochrome] OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=lldD PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.649e-29
Identity = 76/229 (33.19%), Postives = 118/229 (51.53%), Query Frame = -1
Query:  152 KAIALTVDTPRLGRREADIKNRFTLPPFL-------TLKNFQGLDLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTE 775
            + +  TVD P  G R  D  +  + P           L  F   D+G M   +D G ++AY             +    D S+ WKD++W++   K P+++KG+L  ED             VSNHG RQLD V ++  A+  +  A +G + +  D G+R G DV + LA GA G+ +GR  VY+LAA G  GV  +L+++ +E  +AM L+G R++ +I+RD +V E
Sbjct:  150 RTLVFTVDMPVPGARYRDAHSGMSGPNAAFRRMVQAVLHPFWAYDVGLMGTPHDLGNVSAYRKEKTSLEDYVGWLGNNFDPSIGWKDLEWIREFWKGPMVIKGILDPEDARDAVRFGADGIIVSNHGGRQLDGVLSSARAMPAIADAVKGEMTLLADSGIRSGLDVVRMLAQGADGVLLGRAFVYALAAAGRAGVENLLDIIAKEMRVAMTLTGARAISDISRDSLVRE 378          
BLAST of CX671895 vs. ExPASy Swiss-Prot
Match: LLDD_VIBPA (L-lactate dehydrogenase [cytochrome] OS=Vibrio parahaemolyticus GN=lldD PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.154e-29
Identity = 75/225 (33.33%), Postives = 119/225 (52.89%), Query Frame = -1
Query:  158 IALTVDTPRLGRREADIKNRFTLPPFLTLKNFQG-------LDLGKMDEANDSGLAAYVAGQ--------------IDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 769
            +  TVD P  G R  D+ +  + P     + FQ        LD+G + + +D G  +   G+               D S+SWKD++W++     P+++KG+L  ED             VSNHG RQLD V +T  AL  +  A +G + +F+D G+R G DV + LALGA    +GR  VY+LAA+G  GV  +L++  +E  +AM L+G +++ +++RD +V
Sbjct:  152 LVFTVDMPVPGARYRDMHSGMSGPNAAMRRVFQAMRHPSWALDVGLLGKPHDLGNISTYRGEPTKLEDYIGWLGANFDPSISWKDLEWIRDFWDGPMVIKGILDEEDAKDAVRFGADGIVVSNHGGRQLDGVLSTAKALPSIADAVKGDLKIFVDSGIRTGLDVVRMLALGADCTLLGRSFVYALAAQGGAGVENLLDLYDKEMRVAMTLTGAKTIADLSRDSLV 376          
BLAST of CX671895 vs. ExPASy Swiss-Prot
Match: LLDD_PSEMY (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas mendocina (strain ymp) GN=lldD PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.154e-29
Identity = 67/176 (38.07%), Postives = 102/176 (57.95%), Query Frame = -1
Query:  152 DLGKMD--EANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTE 664
            DLG +     N +GLA Y+       D S+SWKD++W++     P+++KG+L  ED             VSNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + LALGA  + +GR  +Y+LA  G+ GV  +L+++ +E  +AM L+G +S+ EIT D +V E
Sbjct:  203 DLGNISAYRGNPTGLADYIGWLGANFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVTFGADGIIVSNHGGRQLDGVLSSARALPAIADAVKGELKILADSGIRTGLDVVRMLALGADTVLLGRAFIYALAVAGQAGVSNLLDLIEKEMRVAMVLTGAKSIAEITSDLLVKE 378          
BLAST of CX671895 vs. ExPASy Swiss-Prot
Match: LLDD_CITK8 (L-lactate dehydrogenase [cytochrome] OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=lldD PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.154e-29
Identity = 75/227 (33.04%), Postives = 117/227 (51.54%), Query Frame = -1
Query:  152 IALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTE 769
            +  TVD P  G R  D  +  + P     + +Q                  DLG +       +GL  Y+   A   D S+SWKD++W++     P+++KG+L  ED             VSNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L+++ +E ++AM L+G +S+ EI+RD +V E
Sbjct:  152 LVFTVDMPTPGARYRDAHSGMSGPNAALRRYWQAATHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADSVLLGRAYLYALATAGQAGVANLLDLIEKEMKVAMTLTGAKSISEISRDSLVQE 378          
BLAST of CX671895 vs. ExPASy Swiss-Prot
Match: LLDD_KLEP3 (L-lactate dehydrogenase [cytochrome] OS=Klebsiella pneumoniae (strain 342) GN=lldD PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.813e-29
Identity = 74/230 (32.17%), Postives = 120/230 (52.17%), Query Frame = -1
Query:  143 IALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDA 769
            +  TVD P  G R  D  +  + P     + +Q +                DLG +       +GL  Y+   A   D S+SWKD++W++     P+++KG+L  ED             VSNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G++GV  +L ++ +E ++AM L+G ++++EI+RD +V   +A
Sbjct:  152 LVFTVDMPTPGARYRDAHSGMSGPNAALRRYWQAVTHPQWAWDVGLNGRPHDLGNISAYLGQPTGLEDYIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDITILADSGIRNGLDVVRMIALGADSVLLGRAYLYALATHGKQGVANLLNLIEKEMKVAMTLTGAKTIREISRDSLVQNAEA 381          
BLAST of CX671895 vs. ExPASy Swiss-Prot
Match: LLDD_ESCF3 (L-lactate dehydrogenase [cytochrome] OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=lldD PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.798e-29
Identity = 75/229 (32.75%), Postives = 118/229 (51.53%), Query Frame = -1
Query:  146 IALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWD 769
            +  TVD P  G R  D  +  + P     + +Q +                DLG +       +GL  Y+   A   D S+SWKD++W++     P+++KG+L  ED             VSNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L ++ +E ++AM L+G +S+ EI++D +V E D
Sbjct:  152 LVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLNLIEKEMKVAMTLTGAKSISEISQDSLVQELD 380          
BLAST of CX671895 vs. ExPASy Swiss-Prot
Match: LLDD_AGRVS (L-lactate dehydrogenase [cytochrome] OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=lldD PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.798e-29
Identity = 77/227 (33.92%), Postives = 117/227 (51.54%), Query Frame = -1
Query:  158 KAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQG-------LDLGKMDEANDSG-----------LAAYVAG---QIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 775
            + +  TVD P  G R  D  +  + P     +  Q        +D+G + + +D G           LA YV       D S+ WKD++W++   K P+++KG+L  ED             VSNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + +A GA G+ IGR  VY+LAA G+ GV  +L++  +E  +AM L+G RS+ EI+ D +V
Sbjct:  150 RKLVFTVDMPVPGARYRDAHSGMSGPNASLRRIIQAVMHPTWAIDVGLLGKPHDLGNVSAYRQQKTNLADYVGWLGENFDPSIGWKDLEWIRDFWKGPMIIKGILDPEDAKDAVRFGADGIIVSNHGGRQLDGVLSSARALPAIAAAVKGDLTILADSGIRSGLDVVRMIAQGADGVLIGRAFVYALAAAGQAGVENLLDLFAKEMRVAMTLTGARSIAEISPDSLV 376          
BLAST of CX671895 vs. ExPASy Swiss-Prot
Match: LLDD_SALCH (L-lactate dehydrogenase [cytochrome] OS=Salmonella choleraesuis GN=lldD PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.184e-29
Identity = 74/227 (32.60%), Postives = 118/227 (51.98%), Query Frame = -1
Query:  152 IALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTE 769
            +  TVD P  G R  D  +  + P    L+ +Q +                DLG +       +GL  Y+   A   D S+SWKD++W++     P+++KG+L  ED             VSNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L+++ +E ++AM L+G +++ EI+ D +V E
Sbjct:  152 LVFTVDMPTPGARYRDAHSGMSGPNAAMLRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLTGAKTISEISGDSLVQE 378          
BLAST of CX671895 vs. ExPASy Swiss-Prot
Match: LLDD_YERPY (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=lldD PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.069e-28
Identity = 75/226 (33.19%), Postives = 116/226 (51.33%), Query Frame = -1
Query:  161 KAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHI 775
            K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY             +A   D S+SWKD++W++   + P+++KG+L  ED             VSNHG RQLD V +T  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  VY+LA  GE GV  +L ++ +E  +AM L+G + + +I RD +
Sbjct:  150 KTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLGNISAYLGKPTTLEDYMGWIATNFDPSISWKDLEWVREFWQGPMIIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAGEAGVINLLTLIEQEMRVAMTLTGAKRIADINRDSL 375          
The following BLAST results are available for this feature:
BLAST of CX671895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_CAUSK1.263e-2936.49L-lactate dehydrogenase [cytochrome] OS=Caulobacte... [more]
LLDD_XANP21.649e-2933.19L-lactate dehydrogenase [cytochrome] OS=Xanthobact... [more]
LLDD_VIBPA2.154e-2933.33L-lactate dehydrogenase [cytochrome] OS=Vibrio par... [more]
LLDD_PSEMY2.154e-2938.07L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_CITK82.154e-2933.04L-lactate dehydrogenase [cytochrome] OS=Citrobacte... [more]
LLDD_KLEP32.813e-2932.17L-lactate dehydrogenase [cytochrome] OS=Klebsiella... [more]
LLDD_ESCF34.798e-2932.75L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_AGRVS4.798e-2933.92L-lactate dehydrogenase [cytochrome] OS=Agrobacter... [more]
LLDD_SALCH8.184e-2932.60L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_YERPY1.069e-2833.19L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13G06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13G06-M11-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671895 ID=CX671895; Name=CX671895; organism=Citrus sinensis; type=EST; length=778bp
CAGAAGCTTAAAATAATTCAGACTCAATTAAACATGAACAAGTTCTCCAA
GAAAAAGAAGTAATAGAAAGTAACCAAATTATTGCTCTTTCTTCTATTTT
GCATGCACGTAACTATAACCTGGGAACCGGGCGAGGGAGAGAAGCATCCC
ATTCAGTGACGATGTGATCACGAGTAATCTCTTTGAGTGAGCGGCAACCA
CTTAGTGCCATTGCTAGCTCAAATTCTTCACGCAGCATCTCGAGTACTCT
TCTAACGCCTTTCTCTCCCTCAGCTGCCAATGAGTACACCACTGGTCGTC
CAATAAATATACCAGAGGCTCCAAGTGCCAATGCTTTGAAGACATCAGTT
CCTCGCCTAACACCACCATCCAAGAACACAGGAATACGCCCCTGAGTAGC
TTTCACAACCTCTTCCAGGGCCATGATAGTGGCAGGGACATAGTCAAGTT
GACGAGCTCCATGATTGGATACAATAATCCCAGCTGCTCCAGCTTGAACT
GCAATCCGCGCATCCTCTGCTGTGAGTACACCCTTCACCAGAATTGGCAA
TTTGGTGATTGTTTGAAGCCACTTCACGTCCTTCCAGCTCAGAGAACGAT
CAATTTGACCAGCAACATAGGCAGCAAGCCCAGAGTCATTTGCCTCGTCC
ATCTTGCCAAGGTCCAAACCCTGAAAATTCTTTAATGTCAAAAATGGTGG
TAGAGTGAATCTGTTCTTGATGTCAGCTTCTCTGCGACCCAGCCTCGGGG
TATCAACTGTTAGAGCAATGGCCTTGAA
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