CX671832

Overview
NameCX671832
Unique NameCX671832
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: AVR2B_RAT (Activin receptor type-2B OS=Rattus norvegicus GN=Acvr2b PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 41/117 (35.04%), Postives = 67/117 (57.26%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQD--------SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEY---ASDWQFS--VKSDVFSFGILLLEIIS 312
            + W++  H+    +RG+ YLH+D         +  I HRD K+ NVLL  D+   ++DFGLA  F   +  G+T+  VGT  YMAPE    A ++Q    ++ D+++ G++L E++S
Sbjct:  283 ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 399          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: AVR2B_MOUSE (Activin receptor type-2B OS=Mus musculus GN=Acvr2b PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 41/117 (35.04%), Postives = 67/117 (57.26%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQD--------SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEY---ASDWQFS--VKSDVFSFGILLLEIIS 312
            + W++  H+    +RG+ YLH+D         +  I HRD K+ NVLL  D+   ++DFGLA  F   +  G+T+  VGT  YMAPE    A ++Q    ++ D+++ G++L E++S
Sbjct:  306 ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 422          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: AVR2B_HUMAN (Activin receptor type-2B OS=Homo sapiens GN=ACVR2B PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 41/117 (35.04%), Postives = 67/117 (57.26%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQD--------SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEY---ASDWQFS--VKSDVFSFGILLLEIIS 312
            + W++  H+    +RG+ YLH+D         +  I HRD K+ NVLL  D+   ++DFGLA  F   +  G+T+  VGT  YMAPE    A ++Q    ++ D+++ G++L E++S
Sbjct:  282 ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 398          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: AVR2B_BOVIN (Activin receptor type-2B OS=Bos taurus GN=ACVR2B PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.204e-11
Identity = 41/117 (35.04%), Postives = 67/117 (57.26%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQD--------SRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEY---ASDWQFS--VKSDVFSFGILLLEIIS 312
            + W++  H+    +RG+ YLH+D         +  I HRD K+ NVLL  D+   ++DFGLA  F   +  G+T+  VGT  YMAPE    A ++Q    ++ D+++ G++L E++S
Sbjct:  282 ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 398          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y5126_ARATH (Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.491e-11
Identity = 48/175 (27.43%), Postives = 82/175 (46.86%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVI 525
            + W+ R  +    A+ + Y    S+ R ++ DL A  VL D D NP++S FGL +    D    +TN       +  PEY    + + +S ++SFG LLL+++SGK                HA  L  +     L+D  ++  F+  +    I +   C+Q  P++RP+  S++
Sbjct:  152 MKWAMRLRVALHIAQALEYC--TSKGRALYHDLNAYRVLFDDDANPRLSCFGLMKN-SRDGKSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPP-----------SHALDLIRDRNIQMLMDSGLEGQFSSDDGTELIRLASRCLQYEPRERPNPKSLV 307          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y1199_DICDI (Probable serine/threonine-protein kinase DDB_G0282895 OS=Dictyostelium discoideum GN=DDB_G0282895 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.491e-11
Identity = 35/92 (38.04%), Postives = 57/92 (61.96%), Query Frame = 1
Query:   40 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISG 315
            A+G+ YLH    +  IHRD+KA+N+L+D++ N K+ DFGL+R     +   N   V GT  + +PE      ++  SDV+S+G++L E+ +G
Sbjct: 1485 AQGLAYLHS---VDFIHRDIKAANILVDKNNNAKVGDFGLSRVI---DNNFNMTAVAGTPKWESPECLMGEAYTSASDVYSYGMMLFELATG 1570          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: RIPK4_MOUSE (Receptor-interacting serine/threonine-protein kinase 4 OS=Mus musculus GN=Ripk4 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.491e-11
Identity = 42/110 (38.18%), Postives = 63/110 (57.27%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEG-NTNCVVGTYGYMAPEYASDWQ--FSVKSDVFSFGILLLEIISGKK 321
            L W  RF I+  TA G+ +LH  S   ++H DLK +N+LLD   + KISDFGLA+  G   +   + + + GT  Y+ PE   +    F  K DV+SF I++  +++ KK
Sbjct:  113 LPWDLRFRIVHETAVGMNFLHCMSP-PLLHLDLKPANILLDAHYHVKISDFGLAKCNGMSHSHDLSMDGLFGTIAYLPPERIREKSRLFDTKHDVYSFAIVIWGVLTQKK 221          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: PKNB_MYCLE (Serine/threonine-protein kinase pknB OS=Mycobacterium leprae GN=pknB PE=3 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 5.491e-11
Identity = 34/98 (34.69%), Postives = 56/98 (57.14%), Query Frame = 1
Query:   25 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGK 318
            I+    + + + HQ+    IIHRD+K +N+++      K+ DFG+ARA     +   T  V+GT  Y++PE A       +SDV+S G +L EI++G+
Sbjct:  118 IVADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSTSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEILTGE 212          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: NEK5_ORYSJ (Serine/threonine-protein kinase Nek5 OS=Oryza sativa subsp. japonica GN=NEK5 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.491e-11
Identity = 36/89 (40.45%), Postives = 53/89 (59.55%), Query Frame = 1
Query:   40 ARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEI 306
            A  V YLH +    ++HRDLK SN+ L +D + ++ DFGLA+    D+    T+ VVGT  YM PE  +D  +  KSD++S G  + E+
Sbjct:  118 ALAVDYLHSNF---VLHRDLKCSNIFLTKDQDIRLGDFGLAKTLKADDL---TSSVVGTPNYMCPELLADIPYGFKSDIWSLGCCMYEM 200          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: NEK5_ARATH (Serine/threonine-protein kinase Nek5 OS=Arabidopsis thaliana GN=NEK5 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.491e-11
Identity = 35/86 (40.70%), Postives = 52/86 (60.47%), Query Frame = 1
Query:   49 VMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEI 306
            V YLH +    ++HRDLK SN+ L +D + ++ DFGLA+    D+    T+ VVGT  YM PE  +D  +  KSD++S G  + E+
Sbjct:  121 VEYLHSNY---VLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDL---TSSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEM 200          
The following BLAST results are available for this feature:
BLAST of CX671832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 367
Match NameE-valueIdentityDescription
AVR2B_RAT4.204e-1135.04Activin receptor type-2B OS=Rattus norvegicus GN=A... [more]
AVR2B_MOUSE4.204e-1135.04Activin receptor type-2B OS=Mus musculus GN=Acvr2b... [more]
AVR2B_HUMAN4.204e-1135.04Activin receptor type-2B OS=Homo sapiens GN=ACVR2B... [more]
AVR2B_BOVIN4.204e-1135.04Activin receptor type-2B OS=Bos taurus GN=ACVR2B P... [more]
Y5126_ARATH5.491e-1127.43Probable serine/threonine-protein kinase At5g41260... [more]
Y1199_DICDI5.491e-1138.04Probable serine/threonine-protein kinase DDB_G0282... [more]
RIPK4_MOUSE5.491e-1138.18Receptor-interacting serine/threonine-protein kina... [more]
PKNB_MYCLE5.491e-1134.69Serine/threonine-protein kinase pknB OS=Mycobacter... [more]
NEK5_ORYSJ5.491e-1140.45Serine/threonine-protein kinase Nek5 OS=Oryza sati... [more]
NEK5_ARATH5.491e-1140.70Serine/threonine-protein kinase Nek5 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13D07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13D07-G13-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671832 ID=CX671832; Name=CX671832; organism=Citrus sinensis; type=EST; length=878bp
TTGGATTGGTCCAAGCGTTTCCACATTATTTGTGGGACTGCTAGGGGTGT
TATGTACCTTCATCAAGATTCTAGATTGAGGATTATACATCGAGATCTCA
AAGCAAGTAATGTGCTACTCGATCAAGATATGAACCCAAAAATTTCGGAT
TTTGGTTTGGCAAGAGCTTTTGGTGGAGACGAGACAGAAGGAAATACAAA
CTGCGTAGTTGGAACATACGGTTATATGGCACCGGAATATGCTAGTGATT
GGCAATTCTCAGTAAAATCCGATGTCTTCAGCTTTGGAATTTTATTGCTG
GAGATAATAAGTGGAAAGAAAAATAGAGGATTTTATCATTCCGACAACAA
GCTTAACCTTATAGGACATGCATGGAAGTTGTGGAACGAAGGCATGCCTT
CACAATTAATCGATCCATGTATTCAAGACTCATTCAATCTTGCTGAAGTG
ATACGATGCATCCACATCGGTTTGTTATGCGTGCAACAGCATCCAAAGGA
CAGGCCAAGCATGCCCTCAGTGATTTTGATGTTGGGCAGCGAGACTGTGT
TGCCTCAGCCAAAGCAACCCGGTTACTTGGCGCACAGGAAATCTACCGGA
CAAGATTATTCATCAAGCACGCCTGAATCATGTTCAACTAATACAATTAC
GATCTCTGAGTTGGAGGGTCGGTAGAGAATCTATTTGTGGTATCATGCCT
TGTTCTACATTGTCAAGTGCAAAAGCAGTAATATGTCAACCAAATGGAAA
GTTAAGATAAATGATTGGATAAAAAATGATGAGGATCATCCAGTGAATGC
ATGTTGTGGATCTAAAAGTTCAGAGGACATGCCAATTTTGCAGCTGACTA
CTTGGCTAAAATGCAGGCTCTATACCTC
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