CX671832

Overview
NameCX671832
Unique NameCX671832
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: PLK4_XENTR (Serine/threonine-protein kinase PLK4 OS=Xenopus tropicalis GN=plk4 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 40/99 (40.40%), Postives = 55/99 (55.56%), Query Frame = 1
Query:   22 HIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGK 318
            H +     G++YLH      I+HRDL  SN+LL  DMN KI+DFGLA        +  T C  GT  Y+APE A+     ++SDV+S G +L   + G+
Sbjct:  115 HFMHQIVTGMLYLHSHG---ILHRDLTLSNLLLSSDMNIKIADFGLATQLKMPNEKHFTMC--GTPNYIAPEIATRSAHGLESDVWSLGCMLYTFLVGR 208          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: PLK4_XENLA (Serine/threonine-protein kinase PLK4 OS=Xenopus laevis GN=plk4 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 40/99 (40.40%), Postives = 55/99 (55.56%), Query Frame = 1
Query:   22 HIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGK 318
            H +     G++YLH      I+HRDL  SN+LL  DMN KI+DFGLA        +  T C  GT  Y+APE A+     ++SDV+S G +L   + G+
Sbjct:  115 HFMHQIVTGMLYLHSHG---ILHRDLTLSNLLLSSDMNIKIADFGLATQLKMPNEKHFTMC--GTPNYIAPEIATRSAHGLESDVWSLGCMLYTFLVGR 208          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: PKNX_STRCO (Probable serine/threonine-protein kinase SCO3848 OS=Streptomyces coelicolor GN=SCO3848 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 37/94 (39.36%), Postives = 56/94 (59.57%), Query Frame = 1
Query:   34 GTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFG-GDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIIS 312
            G  + + Y H   R  I+HRD+K +NV+L ++   K+ DFG+ARA G    T   T  V+GT  Y++PE A   Q   +SD++S G LL E+++
Sbjct:  121 GILQALEYSH---RAGIVHRDIKPANVMLTRNGQVKVMDFGIARAMGDSGMTMTQTAAVIGTAQYLSPEQAKGEQVDARSDLYSTGCLLYELLT 211          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: PDPK1_RAT (3-phosphoinositide-dependent protein kinase 1 OS=Rattus norvegicus GN=Pdpk1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 32/87 (36.78%), Postives = 53/87 (60.92%), Query Frame = 1
Query:   55 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISG 315
            YLH      IIHRDLK  N+LL++DM+ +I+DFG A+    D  +   N  VGT  Y++PE  ++      SD+++ G ++ ++++G
Sbjct:  198 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPDSKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 281          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: PAKF_DICDI (Serine/threonine-protein kinase pakF OS=Dictyostelium discoideum GN=pakF PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 35/97 (36.08%), Postives = 59/97 (60.82%), Query Frame = 1
Query:   25 IICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISG 315
            ++  T +G++YLH  +   IIHRD+KA+NVLL +  + KI+DFG++    G   +     ++GT  +MAPE      +  K+D++S GI ++E+  G
Sbjct:  494 VVKNTLKGLIYLHSQN---IIHRDVKAANVLLSEGCDVKIADFGVSEKLNGALDQSKE--MIGTPLWMAPEVILKKNYDYKADIWSLGITIIEMADG 585          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: NEK6_ARATH (Serine/threonine-protein kinase Nek6 OS=Arabidopsis thaliana GN=NEK6 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 33/84 (39.29%), Postives = 51/84 (60.71%), Query Frame = 1
Query:   55 YLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEI 306
            YLH +   R++HRDLK SN+ L ++   ++ DFGLA+  G D+     + +VGT  YM PE  +D  +  KSD++S G  + E+
Sbjct:  118 YLHNN---RVLHRDLKCSNIFLTKENEVRLGDFGLAKLLGKDDL---ASSMVGTPNYMCPELLADIPYGYKSDIWSLGCCMFEV 195          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: MST4_MOUSE (Serine/threonine-protein kinase MST4 OS=Mus musculus GN=Mst4 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 45/136 (33.09%), Postives = 69/136 (50.74%), Query Frame = 1
Query:   43 RGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYH---------SDNKLNLIGHAWKLWNEGMPSQLIDPCI 423
            +G+ YLH + +   IHRD+KA+NVLL +  + K++DFG+A      +T+   N  VGT  +MAPE      +  K+D++S GI  +E+  G+      H          +N   LIG   K + E      ID C+
Sbjct:  130 KGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLIGDFTKSFKE-----FIDACL 255          
The following BLAST results are available for this feature:
BLAST of CX671832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 367
Match NameE-valueIdentityDescription
PLK4_XENTR9.366e-1140.40Serine/threonine-protein kinase PLK4 OS=Xenopus tr... [more]
PLK4_XENLA9.366e-1140.40Serine/threonine-protein kinase PLK4 OS=Xenopus la... [more]
PKNX_STRCO9.366e-1139.36Probable serine/threonine-protein kinase SCO3848 O... [more]
PDPK1_RAT9.366e-1136.783-phosphoinositide-dependent protein kinase 1 OS=R... [more]
PAKF_DICDI9.366e-1136.08Serine/threonine-protein kinase pakF OS=Dictyostel... [more]
NEK6_ARATH9.366e-1139.29Serine/threonine-protein kinase Nek6 OS=Arabidopsi... [more]
MST4_MOUSE9.366e-1133.09Serine/threonine-protein kinase MST4 OS=Mus muscul... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13D07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13D07-G13-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671832 ID=CX671832; Name=CX671832; organism=Citrus sinensis; type=EST; length=878bp
TTGGATTGGTCCAAGCGTTTCCACATTATTTGTGGGACTGCTAGGGGTGT
TATGTACCTTCATCAAGATTCTAGATTGAGGATTATACATCGAGATCTCA
AAGCAAGTAATGTGCTACTCGATCAAGATATGAACCCAAAAATTTCGGAT
TTTGGTTTGGCAAGAGCTTTTGGTGGAGACGAGACAGAAGGAAATACAAA
CTGCGTAGTTGGAACATACGGTTATATGGCACCGGAATATGCTAGTGATT
GGCAATTCTCAGTAAAATCCGATGTCTTCAGCTTTGGAATTTTATTGCTG
GAGATAATAAGTGGAAAGAAAAATAGAGGATTTTATCATTCCGACAACAA
GCTTAACCTTATAGGACATGCATGGAAGTTGTGGAACGAAGGCATGCCTT
CACAATTAATCGATCCATGTATTCAAGACTCATTCAATCTTGCTGAAGTG
ATACGATGCATCCACATCGGTTTGTTATGCGTGCAACAGCATCCAAAGGA
CAGGCCAAGCATGCCCTCAGTGATTTTGATGTTGGGCAGCGAGACTGTGT
TGCCTCAGCCAAAGCAACCCGGTTACTTGGCGCACAGGAAATCTACCGGA
CAAGATTATTCATCAAGCACGCCTGAATCATGTTCAACTAATACAATTAC
GATCTCTGAGTTGGAGGGTCGGTAGAGAATCTATTTGTGGTATCATGCCT
TGTTCTACATTGTCAAGTGCAAAAGCAGTAATATGTCAACCAAATGGAAA
GTTAAGATAAATGATTGGATAAAAAATGATGAGGATCATCCAGTGAATGC
ATGTTGTGGATCTAAAAGTTCAGAGGACATGCCAATTTTGCAGCTGACTA
CTTGGCTAAAATGCAGGCTCTATACCTC
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