CX671832

Overview
NameCX671832
Unique NameCX671832
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 1.340e-41
Identity = 83/195 (42.56%), Postives = 130/195 (66.67%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML-GSETVLPQPKQPGYLA 582
            L W +RF+II G + G+ YLH+ S ++IIHRD+K SN+LLD++++PKI+DFGL R+ G D+T+ NT  + GT GY+APEY    Q + K+DV++FG+L++EI++GKKN  F  +    +++   W+ +      + IDP ++ SF   E ++ + IGLLCVQ   + RPSM  ++ ML   ++    PKQP +L+
Sbjct:  412 LSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTNTG-IAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGKKNNAF--TQGTSSVLYSVWEHFKANTLDRSIDPRLKGSFVEEEALKVLQIGLLCVQSSVELRPSMSEIVFMLQNKDSKFEYPKQPPFLS 603          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 1.254e-39
Identity = 89/194 (45.88%), Postives = 122/194 (62.89%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILML-GSETVLPQPKQPGYL 579
            LDWS R+ I  G ARG++YLH+++RLRI+HRD+KASN+LLD  + PK+SDFGLA+ +   +T  +T  V GT GY+APEYA     + K+DV++FG++ LE++SG+ N      D K  L+  AW L  +G   +LID  + + FN+ E  R I I LLC Q     RP M  V+ ML G   V     +PGYL
Sbjct:  786 LDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDDKKTHISTR-VAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEDEKRYLLEWAWNLHEKGREVELIDHQLTE-FNMEEGKRMIGIALLCTQTSHALRPPMSRVVAMLSGDVEVSDVTSKPGYL 977          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.766e-39
Identity = 84/187 (44.92%), Postives = 119/187 (63.64%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQP 561
            LDWS R  I  G A+G+ YLH++SRL+I+HRD+KA+NVLLD  +N KISDFGLA+    + T  +T  + GT GYMAPEYA     + K+DV+SFG++ LEI+SGK N  +   +  + L+  A+ L  +G   +L+DP +  SF+  E +R ++I LLC    P  RP M SV+ ML  +  +  P
Sbjct:  764 LDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDDENTHISTR-IAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLEGKIKVQPP 949          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.766e-39
Identity = 87/235 (37.02%), Postives = 136/235 (57.87%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQ-----------PKQPGYLAH----RKSTGQDYSSSTPESCSTNTITISE 660
            LDWS R  I  G A+G+ +LH++SR++I+HRD+KASNVLLD+D+N KISDFGLA+      T  +T  + GT GYMAPEYA     + K+DV+SFG++ LEI+SGK N  F  +++ + L+  A+ L   G   +L+DP +   ++  E +  +++ L+C    P  RP+M  V+ ++  +T + +           PK      H      S    +S+S P + S N++  +E
Sbjct:  774 LDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDDGNTHISTR-IAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGKSNTNFRPTEDFVYLLDWAYVLQERGSLLELVDPTLASDYSEEEAMLMLNVALMCTNASPTLRPTMSQVVSLIEGKTAMQELLSDPSFSTVNPKLKALRNHFWQNELSRSLSFSTSGPRTASANSLVDAE 1007          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 8.129e-39
Identity = 83/187 (44.39%), Postives = 119/187 (63.64%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQP 561
            LDWS R  +  G A+G+ YLH++SRL+I+HRD+KA+NVLLD  +N KISDFGLA+    + T  +T  + GT GYMAPEYA     + K+DV+SFG++ LEI+SGK N  +   +  + L+  A+ L  +G   +L+DP +  SF+  E +R ++I LLC    P  RP M SV+ ML  +  +  P
Sbjct:  762 LDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTR-IAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLQGKIKVQPP 947          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 1.387e-38
Identity = 84/198 (42.42%), Postives = 120/198 (60.61%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPKQPGYLAHRKS 594
            LDW  R  I  G ARG+ YLH++SRL+I+HRD+KA+NVLLD+ +NPKISDFGLA+    D T  +T  + GT+GYMAPEYA     + K+DV+SFGI+ LEI+ G+ N+     +N   LI     L  +    +L+DP +   +N  E +  I I ++C    P +RPSM  V+ ML  + ++   K      HR++
Sbjct:  719 LDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHISTR-IAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGRSNKIERSKNNTFYLIDWVEVLREKNNLLELVDPRLGSEYNREEAMTMIQIAIMCTSSEPCERPSMSEVVKMLEGKKMVEVEKLEEASVHRET 915          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: CRK43_ARATH (Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.269e-38
Identity = 92/200 (46.00%), Postives = 125/200 (62.50%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAF--GGDETEGNT---NCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKL-NLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGS-ETVLPQPKQPGYL 579
            LDW KR  II GTA G+ YLH+  +  IIHRD+KASN+LLD    PKISDFGLA+ +  GG +   ++   + + GT GYMAPEY S  + S K D +SFG+L+LEI SG +N  F  SDN L  L+   WK +      ++ID  + +  +  E+ R + IGLLC Q+ P+ RP+M  VI M+ S + VLP P +P +L
Sbjct:  425 LDWKKRRTIILGTAEGLEYLHETCK--IIHRDIKASNILLDLKYKPKISDFGLAKFYPEGGKDIPASSLSPSSIAGTLGYMAPEYISKGRLSNKIDAYSFGVLVLEITSGFRNNKF-RSDNSLETLVTQVWKCFASNKMEEMIDKDMGEDTDKQEMKRVMQIGLLCTQESPQLRPTMSKVIQMVSSTDIVLPTPTKPPFL 621          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 2.002e-37
Identity = 83/195 (42.56%), Postives = 121/195 (62.05%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQ-PKQPGYLA 582
            LDWS R+ I  G ARG++YLH+++ +RI+HRD+KASN+LLD  + P+ISDFGLA+ +   +T  +T  V GT GY+APEYA     + K+DV++FG++ LE++SG+ N      + K  L+  AW L  +    +LID  + D FN+ E  R I I LLC Q     RP M  V+ ML  +  +     +PGY++
Sbjct:  787 LDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLYDDKKTHISTR-VAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEEEKKYLLEWAWNLHEKSRDIELIDDKLTD-FNMEEAKRMIGIALLCTQTSHALRPPMSRVVAMLSGDVEIGDVTSKPGYVS 979          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 8.413e-36
Identity = 81/192 (42.19%), Postives = 119/192 (61.98%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDPCIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPKQ-PG 573
            +DW  RF I CG A+G+ +LH++S L+ +HRD+KA+N+LLD+D+ PKISDFGLAR    ++T  +T  V GT GYMAPEYA     + K+DV+SFG+L+LEI++G  N  F  + + + L+  A +    G   Q++D  ++   +  E    I + L+C    P DRP M  V+ ML  E + P P+  PG
Sbjct:  776 MDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLTPKISDFGLARLDEEEKTHISTK-VAGTIGYMAPEYALWGYLTFKADVYSFGVLVLEIVAGITNSNFMGAGDSVCLLEFANECVESGHLMQVVDERLRPEVDRKEAEAVIKVALVCSSASPTDRPLMSEVVAML--EGLYPVPESTPG 964          
BLAST of CX671832 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.175e-35
Identity = 77/190 (40.53%), Postives = 116/190 (61.05%), Query Frame = 1
Query:    1 LDWSKRFHIICGTARGVMYLHQDSRLRIIHRDLKASNVLLDQDMNPKISDFGLARAFGGDETEGNTNCVVGTYGYMAPEYASDWQFSVKSDVFSFGILLLEIISGKKNRGFYHSDNKLNLIGHAWKLWNEGMPSQLIDP-CIQDSFNLAEVIRCIHIGLLCVQQHPKDRPSMPSVILMLGSETVLPQPKQ 567
            LDW  R +II G A+G+ YLH D   RIIHRD+K+SN+LLD ++  ++SDFGLA+    DE    T  V GT+GY+APEY    + + K+DV+SFG+L+LE++SGK+       +  LN++G    L +E  P  ++DP C  +   +  +   + I   CV   P++RP+M  V+ +L SE + P P +
Sbjct:  398 LDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLL-EDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNVVGWLKFLISEKRPRDIVDPNC--EGMQMESLDALLSIATQCVSPSPEERPTMHRVVQLLESEVMTPCPSE 584          
The following BLAST results are available for this feature:
BLAST of CX671832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 367
Match NameE-valueIdentityDescription
CRK1_ARATH1.340e-4142.56Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]
Y5614_ARATH1.254e-3945.88Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH4.766e-3944.92Probable LRR receptor-like serine/threonine-protei... [more]
Y1765_ARATH4.766e-3937.02Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH8.129e-3944.39Probable LRR receptor-like serine/threonine-protei... [more]
Y1534_ARATH1.387e-3842.42Probable LRR receptor-like serine/threonine-protei... [more]
CRK43_ARATH5.269e-3846.00Putative cysteine-rich receptor-like protein kinas... [more]
Y1561_ARATH2.002e-3742.56Probable LRR receptor-like serine/threonine-protei... [more]
RKF1_ARATH8.413e-3642.19Probable LRR receptor-like serine/threonine-protei... [more]
FEI1_ARATH4.175e-3540.53LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13D07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13D07-G13-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671832 ID=CX671832; Name=CX671832; organism=Citrus sinensis; type=EST; length=878bp
TTGGATTGGTCCAAGCGTTTCCACATTATTTGTGGGACTGCTAGGGGTGT
TATGTACCTTCATCAAGATTCTAGATTGAGGATTATACATCGAGATCTCA
AAGCAAGTAATGTGCTACTCGATCAAGATATGAACCCAAAAATTTCGGAT
TTTGGTTTGGCAAGAGCTTTTGGTGGAGACGAGACAGAAGGAAATACAAA
CTGCGTAGTTGGAACATACGGTTATATGGCACCGGAATATGCTAGTGATT
GGCAATTCTCAGTAAAATCCGATGTCTTCAGCTTTGGAATTTTATTGCTG
GAGATAATAAGTGGAAAGAAAAATAGAGGATTTTATCATTCCGACAACAA
GCTTAACCTTATAGGACATGCATGGAAGTTGTGGAACGAAGGCATGCCTT
CACAATTAATCGATCCATGTATTCAAGACTCATTCAATCTTGCTGAAGTG
ATACGATGCATCCACATCGGTTTGTTATGCGTGCAACAGCATCCAAAGGA
CAGGCCAAGCATGCCCTCAGTGATTTTGATGTTGGGCAGCGAGACTGTGT
TGCCTCAGCCAAAGCAACCCGGTTACTTGGCGCACAGGAAATCTACCGGA
CAAGATTATTCATCAAGCACGCCTGAATCATGTTCAACTAATACAATTAC
GATCTCTGAGTTGGAGGGTCGGTAGAGAATCTATTTGTGGTATCATGCCT
TGTTCTACATTGTCAAGTGCAAAAGCAGTAATATGTCAACCAAATGGAAA
GTTAAGATAAATGATTGGATAAAAAATGATGAGGATCATCCAGTGAATGC
ATGTTGTGGATCTAAAAGTTCAGAGGACATGCCAATTTTGCAGCTGACTA
CTTGGCTAAAATGCAGGCTCTATACCTC
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