CX671818
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671818 vs. ExPASy Swiss-Prot
Match: RL31_SYNJB (50S ribosomal protein L31 OS=Synechococcus sp. GN=rpmE PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.341e-14 Identity = 37/66 (56.06%), Postives = 50/66 (75.76%), Query Frame = 1 Query: 142 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDAD-QVEKFRQKFG 336 KK +HPQ+Y +AKV CNGE+VMT G T+ E VDVWSGNH F+ G S ++D++ +VEKF +K+G Sbjct: 3 KKGLHPQWYPEAKVICNGEVVMTVGSTKPELKVDVWSGNHPFFTG--SQKIIDSEGRVEKFMRKYG 66
BLAST of CX671818 vs. ExPASy Swiss-Prot
Match: RL31_PROM4 (50S ribosomal protein L31 OS=Prochlorococcus marinus (strain MIT 9211) GN=rpmE PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.341e-14 Identity = 36/65 (55.38%), Postives = 48/65 (73.85%), Query Frame = 1 Query: 142 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFG 336 K+DIHP +Y DAKV CNGE+VMTTG TQ E VDVWSGNH F+ G + + + +V++F +K+G Sbjct: 3 KEDIHPTWYPDAKVICNGEVVMTTGSTQPEIHVDVWSGNHPFFTGTQKILDTEG-RVDRFMRKYG 66
BLAST of CX671818 vs. ExPASy Swiss-Prot
Match: RL31_SYNS9 (50S ribosomal protein L31 OS=Synechococcus sp. (strain CC9902) GN=rpmE PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.752e-14 Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 1 Query: 142 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFG 336 K DIHP +Y DAKV CNGE+VMTTG TQ E VDVWSGNH F+ G + + + +V++F +K+G Sbjct: 3 KSDIHPTWYPDAKVICNGEVVMTTGATQPEIHVDVWSGNHPFFTGTQKILDTEG-RVDRFMKKYG 66
BLAST of CX671818 vs. ExPASy Swiss-Prot
Match: RL31_SYNJA (50S ribosomal protein L31 OS=Synechococcus sp. (strain JA-3-3Ab) GN=rpmE PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.752e-14 Identity = 37/66 (56.06%), Postives = 50/66 (75.76%), Query Frame = 1 Query: 142 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDAD-QVEKFRQKFG 336 KK IHPQ+Y +AKV CNGE+VMT G T+ E VDVWSGNH F+ G S ++D++ +V+KF +K+G Sbjct: 3 KKGIHPQWYPEAKVICNGEVVMTVGSTKPELKVDVWSGNHPFFTG--SQKIIDSEGRVDKFMRKYG 66
BLAST of CX671818 vs. ExPASy Swiss-Prot
Match: RL31_PROMM (50S ribosomal protein L31 OS=Prochlorococcus marinus (strain MIT 9313) GN=rpmE PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.752e-14 Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 1 Query: 142 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFG 336 K DIHP +Y DAKV CNGE+VMTTG TQ E VDVWSGNH F+ G + + + +V++F +K+G Sbjct: 3 KPDIHPNWYPDAKVICNGEVVMTTGSTQPELHVDVWSGNHPFFTGTQKILDTEG-RVDRFMRKYG 66
BLAST of CX671818 vs. ExPASy Swiss-Prot
Match: RL31_PROM3 (50S ribosomal protein L31 OS=Prochlorococcus marinus (strain MIT 9303) GN=rpmE PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.752e-14 Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 1 Query: 142 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFG 336 K DIHP +Y DAKV CNGE+VMTTG TQ E VDVWSGNH F+ G + + + +V++F +K+G Sbjct: 3 KPDIHPNWYPDAKVICNGEVVMTTGSTQPELHVDVWSGNHPFFTGTQKILDTEG-RVDRFMRKYG 66
BLAST of CX671818 vs. ExPASy Swiss-Prot
Match: RL31_SYNSC (50S ribosomal protein L31 OS=Synechococcus sp. (strain CC9605) GN=rpmE PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.288e-14 Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 1 Query: 142 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFG 336 K DIHP +Y DAKV CNGE+VMTTG TQ E VDVWSGNH F+ G + + + +V++F +K+G Sbjct: 3 KPDIHPTWYPDAKVICNGEVVMTTGATQPEIHVDVWSGNHPFFTGTQKILDTEG-RVDRFMKKYG 66
BLAST of CX671818 vs. ExPASy Swiss-Prot
Match: RL31_SYNS3 (50S ribosomal protein L31 OS=Synechococcus sp. (strain CC9311) GN=rpmE PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.288e-14 Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 1 Query: 142 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFG 336 K DIHP +Y DAKV CNGE+VMTTG TQ E VDVWSGNH F+ G + + + +V++F +K+G Sbjct: 3 KPDIHPTWYPDAKVICNGEVVMTTGSTQPEINVDVWSGNHPFFTGTQKILDTEG-RVDRFMRKYG 66
BLAST of CX671818 vs. ExPASy Swiss-Prot
Match: RL31_SYNPX (50S ribosomal protein L31 OS=Synechococcus sp. (strain WH8102) GN=rpmE PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.288e-14 Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 1 Query: 142 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFG 336 K DIHP +Y DAKV CNGE+VMTTG TQ E VDVWSGNH F+ G + + + +V++F +K+G Sbjct: 3 KPDIHPTWYPDAKVICNGEVVMTTGSTQPEIHVDVWSGNHPFFTGTQKILDTEG-RVDRFMKKYG 66
BLAST of CX671818 vs. ExPASy Swiss-Prot
Match: RL31_CYAP8 (50S ribosomal protein L31 OS=Cyanothece sp. (strain PCC 8801) GN=rpmE PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.288e-14 Identity = 35/79 (44.30%), Postives = 53/79 (67.09%), Query Frame = 1 Query: 142 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLSEIMEIPVLKGE 378 K DIHP +Y +AK+ CNGE+VMT G TQ E V+VWSGNH FY G + + + ++++F++++G L + P KG+ Sbjct: 3 KADIHPTWYPEAKIICNGEVVMTVGSTQPEIHVEVWSGNHPFYTGTQKMIDTEG-RIDRFQKRYGNLGKGGSKPNKKGD 80 The following BLAST results are available for this feature:
BLAST of CX671818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671818 ID=CX671818; Name=CX671818; organism=Citrus sinensis; type=EST; length=554bpback to top |