CX671818

Overview
NameCX671818
Unique NameCX671818
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length554
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX671818 vs. ExPASy Swiss-Prot
Match: RL31_MICAN (50S ribosomal protein L31 OS=Microcystis aeruginosa (strain NIES-843) GN=rpmE PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.230e-12
Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 1 
Query:  145 KDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKF 333
            K IHP +Y +AKV CNGELVMT G T+ E  V+VWSGNH FY G +  +  +  +V++F +K+
Sbjct:    3 KKIHPTWYPEAKVICNGELVMTVGSTKPEIHVEVWSGNHPFYTGTQKMIDTEG-RVDRFLRKY 64
The following BLAST results are available for this feature:
BLAST of CX671818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
RL31_MICAN6.230e-1250.7950S ribosomal protein L31 OS=Microcystis aeruginos... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13C11_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13C11-E21-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671818 ID=CX671818; Name=CX671818; organism=Citrus sinensis; type=EST; length=554bp
CGCACAGTACTGAAAATGGCGCAGACTTTACCCAACACATTCTTCCAAAT
CAAACCCTCTGCTCCAATTCTCCCCACCAGAAAGGTGAAGAACTGTGCAG
CAACGGGCAGTGGTTACAGGACCCGGGCGGTGACGTGTCGAAAGAAGGAC
ATACACCCTCAATTCTACGAGGATGCAAAAGTGTACTGTAACGGTGAGCT
CGTAATGACGACGGGTGGGACCCAGAAGGAGTACGTGGTGGATGTCTGGT
CGGGAAACCATGCGTTTTACCTCGGCGGCCGCTCTGCTGTTGTCGTCGAC
GCCGACCAAGTCGAGAAGTTCCGTCAGAAGTTCGGAGGATTGTCTGAGAT
TATGGAAATTCCCGTGCTTAAAGGAGAGATTGTGTTGCCGCCTAAGCGCA
AGTCCGCGGCCGCTAAAGGTGGCAAGAAGAAGTAGAAATTTGGTACGGCG
TTGTTTTGAGGTAATTGGGGAATGTTTGTGAGTGGATGGATTTTATTTGA
TCGAATGATGTGTTGATATTTGAACGACAAACATTATTATCAAATTATAT
TTTT
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