CX671815
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671815 vs. ExPASy Swiss-Prot
Match: CRYD_OSTTA (Cryptochrome DASH, chloroplastic/mitochondrial OS=Ostreococcus tauri GN=Ot01g06320 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 5.038e-18 Identity = 67/245 (27.35%), Postives = 117/245 (47.76%), Query Frame = -1 Query: 256 VYAHREVSHDEVKSEEKIEAAMKDEG------IEVKYFWGSTLYHLDDLPFK----LGEMPTNYGGFREKVKG-VEIRKTIEA--LDQLKGLPSRGDVEPGD-IPSLLDLGLSQSAAMSQGGKPAANSM--------KGGETEALQRLKKFAAEYQAQPPKGNKDGNHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTATSISAASKWNDGESGSSGAGSNWLMFELLWRDFFRFITKKYSS 924 + EV+ +E + + +E A ++ ++ WGSTLYH+DD+PF L ++P + FR KV+ ++R I A ++L +P+ VE + +P DL + S K + + KGGE+ AL R+K + E + + G ++S K++PWLA+GC+SPR + E+++ + + W++FEL+WRDFF+F K+ + Sbjct: 109 ILTQTEVTSEETEMDVAVERATRERARGGAASATMERHWGSTLYHIDDVPFDVTSGLSDLPDVFTPFRNKVESKCKVRDVIPAPTANELGHVPA--SVEGFEWMPKPSDLPFASSEIAMDCDKRIKDCLDERSVLDFKGGESNALARVKYYLWESDRLATYFE---TRNGMLGGDYSTKLAPWLALGCVSPRHVVSEIRRYES------------ERVENKSTYWVIFELIWRDFFKFFALKHGN 336
BLAST of CX671815 vs. ExPASy Swiss-Prot
Match: CRYD_VIBPA (Cryptochrome DASH OS=Vibrio parahaemolyticus GN=cry PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.677e-13 Identity = 54/186 (29.03%), Postives = 88/186 (47.31%), Query Frame = -1 Query: 262 TLYHLDDLPFKLGEMPTNYGGFREKVKGVEIRKTIEALDQLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEYQAQPPKGNKDGNHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTATSISAASKWNDGESGSSGAGSNWLMFELLWRDFFRFITKKY 819 +L+ LPF L ++P + FR+ V+G++I I+A +L +P + +P+L +SA S GGE L +++ A K ++G + G +S K SPWLA+GC+SPR + LK+ + A ND + W+ FELLWR++F + + Y Sbjct: 136 SLFDESKLPFTLPDLPETFTQFRKCVEGIDIAHPIDAPSRLPPMP-----KGAQLPTLSSFYFDESALFS-----------GGEWSGLAHCRRYFFSGLASSYKETRNG----LDGMAYSTKFSPWLALGCVSPRMIHAMLKQYEQTQGA----ND--------STYWIYFELLWREYFYWYARCY 289
BLAST of CX671815 vs. ExPASy Swiss-Prot
Match: CRYD_IDILO (Cryptochrome DASH OS=Idiomarina loihiensis GN=cry PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.163e-12 Identity = 53/187 (28.34%), Postives = 86/187 (45.99%), Query Frame = -1 Query: 262 STLYHLDDLPFKLGEMPTNYGGFREKVKGVEIRKTIEALDQLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAEYQAQPPKGNKDGNHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTATSISAASKWNDGESGSSGAGSNWLMFELLWRDFFRFITKKY 822 +TL+ +LPF+L ++P + FR+KV+ + +++ ++ L LP +L +L A++ +GGE AL L + + A K ++ D + S K SPWLA GCLS R + L+ T GE+ S S W+ FELLWR++F + K+ Sbjct: 145 NTLFSEQELPFELADLPETFSQFRKKVEPLSRNFSVQPVNALPSLPKNISYPGFKAETLNEL--------------ASDDFEGGERAALTHLTSYFSGESAGTYKQTRNALDD----FSSSTKFSPWLAQGCLSVRQIMAALRAYETEF--------GENES----SYWISFELLWREYFFWYALKH 301 The following BLAST results are available for this feature:
BLAST of CX671815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671815 ID=CX671815; Name=CX671815; organism=Citrus sinensis; type=EST; length=927bpback to top |