CX671808

Overview
NameCX671808
Unique NameCX671808
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX671808_ssr18 microsatellite CX671808_ssr18:18..35. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CX671808 vs. ExPASy Swiss-Prot
Match: PT113_ORYSJ (Putative inorganic phosphate transporter 1-13 OS=Oryza sativa subsp. japonica GN=PHT1-13 PE=3 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.118e-35
Identity = 82/170 (48.24%), Postives = 105/170 (61.76%), Query Frame = -2
Query:  267 YFVTVFFIDRIGRVAIQALGFFFMGVIYLAIGVLYSYKWSKHTN-FGFMFLYALTFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAFGKVGAIIGTVAFLWASHDDNKVNATGVTIALLILGGVCFMGFAITYFFTRETMGRSL-------EENEKEDDSDALCFLR 752
            YF TV F+DRIGRV IQ +GF  M V  L + + Y  +W +H N +GF  +Y LTFFFANFGPNTTTFI+PAE+FPAR RSTCHGISGA GK+GAI+G   FL+  +         + I L +L G   +GF  T     E+ G+SL       EE ++ED+   +   R
Sbjct:  342 YFFTVAFVDRIGRVKIQLIGFTMMTVFMLCLAIPYD-QWLRHKNKYGFAVMYGLTFFFANFGPNTTTFIIPAEIFPARLRSTCHGISGAVGKIGAIVGVFGFLYTEYH--------IRIFLFVLIGCNLVGFIFTLLLP-ESKGKSLEDLTGEIEEFQEEDEGSEVALSR 501          
BLAST of CX671808 vs. ExPASy Swiss-Prot
Match: PHT15_ORYSJ (Probable inorganic phosphate transporter 1-5 OS=Oryza sativa subsp. japonica GN=PHT1-5 PE=2 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.118e-35
Identity = 83/164 (50.61%), Postives = 107/164 (65.24%), Query Frame = -2
Query:  282 YFVTVFFIDRIGRVAIQALGFFFMGVIYLAIGVLYSYKWSKHTNFGFMFLYALTFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAFGKVGAIIGTVAFLWA--SHDDNKVNA-----TGVTIALLILGGVCFMGFAITYFFTRETMGRSLEENEKEDDSDA 752
            Y+ TV FID +GR AIQ  GFF M    L + V Y +  +   + GF+ +YA TFFFANFGPN+TTFIVPAE+FPAR RSTCHGIS A GK+GAI+G+  FL+A  S D +K +A      GV  +L +L G   +GF  T F   E+ G+SLEE   E++ +A
Sbjct:  366 YWFTVLFIDIVGRFAIQLGGFFLMTAFMLGLAVPYHHWTTPGNHVGFVVMYAFTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISSAAGKMGAIVGSFGFLYAAQSTDPSKTDAGYPRGIGVRNSLFLLAGCNVVGFLFT-FLVPESKGKSLEELSGENEMEA 528          
BLAST of CX671808 vs. ExPASy Swiss-Prot
Match: PHT13_ARATH (Probable inorganic phosphate transporter 1-3 OS=Arabidopsis thaliana GN=PHT1-3 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.460e-35
Identity = 82/163 (50.31%), Postives = 101/163 (61.96%), Query Frame = -2
Query:  285 YFVTVFFIDRIGRVAIQALGFFFMGVIYLAIGVLYSYKWSKHTNFGFMFLYALTFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAFGKVGAIIGTVAFLWASHDDNKVN-------ATGVTIALLILGGVCFMGFAITYFFTRETMGRSLEENEKEDDSD 752
            Y+ TV FID IGR AIQ +GFF M V   AI   Y++        GF+ +Y+LTFFFANFGPN TTFIVPAE+FPAR RSTCHGIS A GK GAI+G   FL+A+   +K           GV  +L++LG + F+G   T F   E  G+SLEE   E + D
Sbjct:  359 YWFTVAFIDIIGRFAIQLMGFFMMTVFMFAIAFPYNHWILPDNRIGFVVMYSLTFFFANFGPNATTFIVPAEIFPARLRSTCHGISAATGKAGAIVGAFGFLYAAQPQDKTKTDAGYPPGIGVKNSLIMLGVINFVGMLFT-FLVPEPKGKSLEELSGEAEVD 520          
BLAST of CX671808 vs. ExPASy Swiss-Prot
Match: PHT15_ARATH (Probable inorganic phosphate transporter 1-5 OS=Arabidopsis thaliana GN=PHT1-5 PE=2 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 2.491e-35
Identity = 79/164 (48.17%), Postives = 103/164 (62.80%), Query Frame = -2
Query:  282 YFVTVFFIDRIGRVAIQALGFFFMGVIYLAIGVLYSYKWSKHTNFGFMFLYALTFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAFGKVGAIIGTVAFLWA--SHDDNKVNA-----TGVTIALLILGGVCFMGFAITYFFTRETMGRSLEENEKEDDSDA 752
            Y+ TV FID +GR  IQ +GF FM +   A+ + Y +   +    GF+ +Y+LT FFANFGPN TTF+VPAE+FPAR RSTCHGIS A GK GAI+G   FL+A  S D  K +A      GV  +LL+L  V F+G   T     E+ G+SLEE  +ED+  +
Sbjct:  361 YWFTVAFIDILGRFFIQLMGFIFMTIFMFALAIPYDHWRHRENRIGFLIMYSLTMFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYAAQSSDSEKTDAGYPPGIGVRNSLLMLACVNFLGIVFT-LLVPESKGKSLEEISREDEEQS 523          
BLAST of CX671808 vs. ExPASy Swiss-Prot
Match: PT112_ORYSJ (Probable inorganic phosphate transporter 1-12 OS=Oryza sativa subsp. japonica GN=PHT1-12 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.249e-35
Identity = 80/163 (49.08%), Postives = 97/163 (59.51%), Query Frame = -2
Query:  285 YFVTVFFIDRIGRVAIQALGFFFMGVIYLAIGVLYSYKWSKHTNFGFMFLYALTFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAFGKVGAIIGTVAFLWASHDDNKVN-------ATGVTIALLILGGVCFMGFAITYFFTRETMGRSLEENEKEDDSD 752
            Y+ TVF ID IGR  IQ LGF  M    L + + Y +         F+FLY  TFFFANFGPN TTFIVPAE+FPAR RSTCHGIS A GK GAIIG   FL+A+   +K +         GV  AL +L G   +GF +T+    E+ G+SLEE   E D +
Sbjct:  360 YWFTVFLIDIIGRFKIQLLGFAGMTAFMLGLAIPYHHWTMPGNQVIFVFLYGFTFFFANFGPNATTFIVPAEIFPARLRSTCHGISAASGKAGAIIGAFGFLYAAQPQDKAHVDAGYKPGIGVRNALFVLAGCNLVGFLMTWMLVPESKGKSLEEMSGEADDE 522          
BLAST of CX671808 vs. ExPASy Swiss-Prot
Match: PHT12_ARATH (Probable inorganic phosphate transporter 1-2 OS=Arabidopsis thaliana GN=PHT1-2 PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 7.248e-35
Identity = 80/155 (51.61%), Postives = 97/155 (62.58%), Query Frame = -2
Query:  309 YFVTVFFIDRIGRVAIQALGFFFMGVIYLAIGVLYSYKWSKHTNFGFMFLYALTFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAFGKVGAIIGTVAFLWASHDDNKVN-------ATGVTIALLILGGVCFMGFAITYFFTRETMGRSLEE 752
            Y+ TV FID IGR  IQ  GFF M V   AI   Y++        GF+ +Y+LTFFFANFGPN TTFIVPAE+FPAR RSTCHGIS A GK GAIIG   FL+A+ + +K           GV  +L++LG + F+G   T F   E  G+SLEE
Sbjct:  359 YWFTVAFIDTIGRFKIQLNGFFMMTVFMFAIAFPYNHWIKPENRIGFVVMYSLTFFFANFGPNATTFIVPAEIFPARLRSTCHGISAAAGKAGAIIGAFGFLYAAQNQDKAKVDAGYPPGIGVKNSLIVLGVLNFIGMLFT-FLVPEPKGKSLEE 512          
BLAST of CX671808 vs. ExPASy Swiss-Prot
Match: PHT13_ORYSJ (Probable inorganic phosphate transporter 1-3 OS=Oryza sativa subsp. japonica GN=PHT1-3 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.466e-35
Identity = 79/161 (49.07%), Postives = 100/161 (62.11%), Query Frame = -2
Query:  285 YFVTVFFIDRIGRVAIQALGFFFMGVIYLAIGVLYSYKWSKHTNFGFMFLYALTFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAFGKVGAIIGTVAFLWASHDDNKVNA-----TGVTIALLILGGVCFMGFAITYFFTRETMGRSLEENEKEDDSD 752
            Y+ TV FID  GR AIQ +GF  M V  L +   Y +  +   + GF+ +Y  TFFFANFGPN TTFIVPAE++PAR RSTCHGIS A GK GAI+G   FL+A+ D +K  A      G+  AL +L G  F+G  +T     E+ G SLEE  KE+ +D
Sbjct:  361 YWFTVAFIDVAGRFAIQLMGFAMMTVFMLGLAAPYHHWTTPGNHTGFVVMYGFTFFFANFGPNATTFIVPAEIYPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQDPHKPEAGYKPGIGIRNALFVLAGTNFLGMLMT-LLVPESKGMSLEEVSKENVAD 520          
BLAST of CX671808 vs. ExPASy Swiss-Prot
Match: PHT11_ARATH (Inorganic phosphate transporter 1-1 OS=Arabidopsis thaliana GN=PHT1-1 PE=1 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 9.466e-35
Identity = 83/155 (53.55%), Postives = 99/155 (63.87%), Query Frame = -2
Query:  309 YFVTVFFIDRIGRVAIQALGFFFMGVIYLAIGVLYSYKWSKHTNFGFMFLYALTFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAFGKVGAIIGTVAFLWA--SHDDNKVNA-----TGVTIALLILGGVCFMGFAITYFFTRETMGRSLEE 752
            Y+ TV FID IGR  IQ  GFF M V   AI   Y++        GF+ +Y+LTFFFANFGPN TTFIVPAE+FPAR RSTCHGIS A GK GAI+G   FL+A  S D  KV+A      GV  +L++LG + F+G   T F   E  G+SLEE
Sbjct:  359 YWFTVAFIDTIGRFKIQLNGFFMMTVFMFAIAFPYNHWIKPENRIGFVVMYSLTFFFANFGPNATTFIVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSQDKAKVDAGYPPGIGVKNSLIMLGVLNFIGMLFT-FLVPEPKGKSLEE 512          
BLAST of CX671808 vs. ExPASy Swiss-Prot
Match: PHT17_ORYSJ (Probable inorganic phosphate transporter 1-7 OS=Oryza sativa subsp. japonica GN=PHT1-7 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.615e-34
Identity = 79/162 (48.77%), Postives = 99/162 (61.11%), Query Frame = -2
Query:  291 YFVTVFFIDRIGRVAIQALGFFFMGVIYLAIGVLYSYKWSKHTNFGFMFLYALTFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAFGKVGAIIGTVAFLWASHDDNKVNAT--------GVTIALLILGGVCFMGFAITYFFTRETMGRSLEENEKEDD 752
            Y+ TV  ID +GR  IQA GFF M    LA+ V Y +  +     GF+ LYALTFFFANFGPN TTFIVPAE++PAR R+TCHGIS A GKVGAI+G+  FL+ +       A         GV  +L  L G   +GF +T F   E  G+SLEE  +E++
Sbjct:  362 YWFTVALIDVVGRFKIQAAGFFVMTAFMLALAVPYDHWTAAGNQIGFVVLYALTFFFANFGPNATTFIVPAEIYPARLRATCHGISAASGKVGAIVGSFGFLYLAQSPVPAKAAAHGYPPGIGVRNSLFALAGCSLLGFLLT-FLVPEPKGKSLEEMSRENE 522          
BLAST of CX671808 vs. ExPASy Swiss-Prot
Match: PT111_ORYSJ (Inorganic phosphate transporter 1-11 OS=Oryza sativa subsp. japonica GN=PHT1-11 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.014e-34
Identity = 79/153 (51.63%), Postives = 97/153 (63.40%), Query Frame = -2
Query:  294 YFVTVFFIDRIGRVAIQALGFFFMGVIYLAIGVLYSYKWSKHTNFGFMFLYALTFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAFGKVGAIIGTVAFLWASHDDNKVNATGVTIALLILGGVCFMGFAITYFFTRETMGRSLEENEKED 752
            Y+VTV  ID++GR  IQ +GFF M +  LA+G+LY Y  + H  FG   LYALTFFFANFGPN+TTF++PAELFP R RSTCH IS A GK GAI+        +++        +  AL+IL     +GF  T F   ETMGRSLEE   ED
Sbjct:  365 YWVTVALIDKMGRYMIQLIGFFMMSMFMLAMGILYDYLKTHHFLFGL--LYALTFFFANFGPNSTTFVLPAELFPTRVRSTCHAISAAAGKAGAIVAAFGIQKLTYNS---QVKSIKKALIILSITNMLGFFFT-FLVPETMGRSLEEISGED 511          
The following BLAST results are available for this feature:
BLAST of CX671808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
PT113_ORYSJ1.118e-3548.24Putative inorganic phosphate transporter 1-13 OS=O... [more]
PHT15_ORYSJ1.118e-3550.61Probable inorganic phosphate transporter 1-5 OS=Or... [more]
PHT13_ARATH1.460e-3550.31Probable inorganic phosphate transporter 1-3 OS=Ar... [more]
PHT15_ARATH2.491e-3548.17Probable inorganic phosphate transporter 1-5 OS=Ar... [more]
PT112_ORYSJ4.249e-3549.08Probable inorganic phosphate transporter 1-12 OS=O... [more]
PHT12_ARATH7.248e-3551.61Probable inorganic phosphate transporter 1-2 OS=Ar... [more]
PHT13_ORYSJ9.466e-3549.07Probable inorganic phosphate transporter 1-3 OS=Or... [more]
PHT11_ARATH9.466e-3553.55Inorganic phosphate transporter 1-1 OS=Arabidopsis... [more]
PHT17_ORYSJ1.615e-3448.77Probable inorganic phosphate transporter 1-7 OS=Or... [more]
PT111_ORYSJ8.014e-3451.63Inorganic phosphate transporter 1-11 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13C06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13C06-E11-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671808 ID=CX671808; Name=CX671808; organism=Citrus sinensis; type=EST; length=753bp
TTTTAATGTTTATTTTGATATATATATATATATATTTATGTTACAACATG
CCTTTTCACTTCTAGTATACACAACGTTTTCAAGCTTAATTATGTTCTAC
AAATTAAAATTCCTTAATCACAGAATTCGTAAATCGCAAACCACATTTTG
ATACAATTTACATTAACACAGACGGAGAGTGATATTCTCTATGGAGCATC
AGCATTAACAGCAACTTCATTATTGTTGCGAGGTGAATTTGTTCGCAAGC
TTGATTTCGTGAGACATCTAAGAAAACACAGCGCATCGGAATCATCTTCT
TTCTCATTCTCCTCCAGTGATCTCCCCATTGTTTCACGGGTGAAAAAATA
AGTAATGGCGAATCCCATAAAACAAACACCACCCAAGATCAACAGTGCTA
TGGTCACTCCAGTCGCATTAACTTTGTTATCATCGTGTGAAGCCCACAAG
AAGGCTACTGTCCCAATTATGGCACCAACTTTTCCAAAAGCCCCCGAAAT
CCCATGACATGTTGATCTAAATCTTGCAGGAAATAGCTCAGCGGGCACAA
TGAAAGTTGTTGTATTGGGGCCAAAATTTGCAAAGAAAAATGTTAGGGCA
TAGAGGAACATGAATCCGAAATTGGTGTGCTTGCTCCATTTATAGCTATA
AAGTACCCCAATGGCTAAGTAAATTACCCCCATGAAGAAAAACCCTAGGG
CTTGGATTGCGACTCTGCCTATACGATCAATGAAAAAGACGGTGACAAAG
TAA
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