CX671796

Overview
NameCX671796
Unique NameCX671796
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:186..1082. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CAT1_PENJA (Catalase OS=Penicillium janthinellum PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.035e-12
Identity = 44/113 (38.94%), Postives = 66/113 (58.41%), Query Frame = -2 
Query:  543 KLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVN-APKCPHRNNHYDG 878
            +L IQ++  +++ +  F+  +VTK     ++PL   G+LV NKNI   F E     F PG +V G+ ++ D +LQ R+F+Y DTQ +R GPN   L  N  P+ P  NN+ DG
Sbjct:  273 ELEIQSMSFNNDLRERFNSSEVTKSSVVRLVPLITQGKLVFNKNIQMLFNEVIGAMFQPGHIVRGVDFTEDPLLQGRLFSYLDTQLNRHGPNIQQLGFNRPPRAPIHNNNRDG 385
The following BLAST results are available for this feature:
BLAST of CX671796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CAT1_PENJA1.035e-1238.94Catalase OS=Penicillium janthinellum PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13B12_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13B12-C23-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671796 ID=CX671796; Name=CX671796; organism=Citrus sinensis; type=EST; length=897bp
TTTGAACTTCATAAAACAGACTTTTATTAATTGAAACAACAGGAAAAGAG
TCACATAACATGCAAGTTTATTTTCTATATTACAATATACAACAGCAAAC
ATAGGATCGAAATTCTTCACATAGCTGCACCCTTGGTGTTCACTCCTTGC
TCACTCTTGGCAAGTCAAAAGCATCCAGTGTTCCAGTTCAAGTGACACCT
TCAAATGCTTGGCCTCACATTGAGACGAGAAGCTAGCTTCTGACCCAGAG
ATCTGTCGGCCTGAGACCAGTAAGAGACCCATATGCTGCGAACCTCATGG
GTGACACGTGGGTCACATAAAGCCTTAATCCATCGATTAAGGAACCTCTC
TTGCCTGTCTGGGGCCCAGGATCGGTATCTCTCTCCAGGCTGCTTGAAGT
TGTTTTCCTTCTCAATGCAAGCCTTCTCACGCCTTCCTGTAATTACATCA
GAAGGAATGGGATATCTCTCAGCATGACGAGTAGGATCATACCTCGAAGG
AAAGTAATCGACCTCCTCATCCCTGTGCATGAAATTCATGAAACCATCAT
AATGATTGTTGCGATGAGGACATTTGGGTGCATTAACTGGAAGCATCAAG
TAGTTGGGTCCAAGGCGATGCCTCTGGGTATCACCATAGGCAAAGATTCG
ACATTGGAGCATCTTATCATTTGAGTAGTAGATCCCAGGAACCACGATAC
CAGGGTTAAATGCAAGCATTTCATTTTCCGCAAAGAAATTATCGATGTTC
TTGTTCAAGACCAAGCGTCCAACTGGCTGCAGAGGGATGATGTCCTCAGG
CCACCACTTGGTTACGTCCAGTGGGTCAAAGTCAAATTGGTCCTCGTGAT
CGGGATCAATAGTCTGAATGTAGAGTTTCCACTCAGGATAGTTTCCA
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