CX671796

Overview
NameCX671796
Unique NameCX671796
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:186..1082. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_VIBCH (Catalase OS=Vibrio cholerae GN=VC_1585 PE=3 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 6.893e-33
Identity = 78/227 (34.36%), Postives = 122/227 (53.74%), Query Frame = -2
Query:  219 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSW-APDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLN 896
            GN+P+W LY+Q + P+   + D++ LD TK W +  +P + VG + LNK  DNFF E E  AF P  ++PGI  S D++LQ R+FAY DTQ +RLG N   LP+N P     +++ +G  N      +++Y PSR    +   ++      + G  ++  I    NF Q G  YRS    D+Q+   N  +    +     E+++  VS++ +AD+  G +LA   N
Sbjct:  269 GNHPKWDLYVQVLTPEQLSKLDYNGLDATKVWLD--VPEKKVGTMTLNKVPDNFFLETEQSAFAPSNLIPGIEPSEDRLLQGRLFAYADTQLYRLGANLFQLPINRPLVEVNSHNQEGASNSAQTASDINYQPSRKLELKEDPQFKAVQTQLVGSVQQKAISNPRNFYQAGVLYRSLNEQDKQDLITN--LXGBLNKVTDKEIKATMVSHFYRADKDYGTRLARATN 491          
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_HELPY (Catalase OS=Helicobacter pylori GN=katA PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 6.893e-33
Identity = 87/228 (38.16%), Postives = 124/228 (54.39%), Query Frame = -2
Query:  255 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKE-------------NNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTH-EVRSIWVSYWSQAD 896
            G++P+WKL IQ +  +   ++ F P DVTK W     PL  VG + LNKN +N+FAE E  AF+P  VVPGI YS D+MLQ R+F+YGDT R+RLG NY  +PVN P+CP  ++  DG+M   +     +Y PS     +  +    P      +   A IEKE             + + QPG+ YRS   D +ER  +   ++L    VTH E+    + ++ +AD
Sbjct:  253 GDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPENYFAEVEQAAFSPANVVPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNKPRCPFHSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDP------KFNLAHIEKEFEVWNWDYRADDSDYYTQPGDYYRSLPADEKERLHDTIGESLA--HVTHKEIVDKQLEHFKKAD 472          
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATE_RHIME (Catalase C OS=Rhizobium meliloti GN=katE PE=2 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 1.176e-32
Identity = 87/235 (37.02%), Postives = 127/235 (54.04%), Query Frame = -2
Query:  216 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLG-PNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPS------RYDPTRHAERYPIPSDVITGRREKACIEK-ENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 896
            GN+PEW L++Q  D D  D+FDFD LD TK  PE+++P +PVGRLVL++  +NFFAE E +AF    V PGI +S+D +LQ R F+Y DTQ  RLG PN+  LP+NAPKCP ++   DG M   +    V+Y P+      R  P +    +P       G + +   E   +++ Q  + + S  P  Q    +     L     T  +R   V++    D +LG+K+   L +
Sbjct:  289 GNFPEWDLHVQLFDQDFADKFDFDILDPTKIIPEEVLPTKPVGRLVLDRMPENFFAETEQVAFMTQNVPPGIDFSDDPLLQGRNFSYLDTQLKRLGSPNFTHLPINAPKCPFQHFQQDGHMAMRNPVGRVNYQPNSWGEGPRESPMKGFRHFPSEEQ---GPKLRIRAESFADHYSQARQFFISQTPPEQRHIADALTFELSKVE-TPVIRERMVAHLLNIDETLGKKVGHALGL 519          
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_BACSU (Vegetative catalase OS=Bacillus subtilis GN=katA PE=1 SV=5)

HSP 1 Score: 140.584 bits (353), Expect = 1.176e-32
Identity = 77/228 (33.77%), Postives = 125/228 (54.82%), Query Frame = -2
Query:  216 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 896
            G+YP WKLY+Q +  +  + + FDP DVTK W +   PL  VGR+VL++N +N+FAE E   F+PG +VPGI  S DKMLQ R+FAY D  R+R+G N+  LP+N  +    N   DG M F  +    V Y P+ +   + +      +  + G  +    +  +++ Q G+ YR  + D + R +   + A+  P    E++   + ++ +AD   G+++A  L +
Sbjct:  251 GDYPAWKLYVQIMPLEDANTYRFDPFDVTKVWSQKDYPLIEVGRMVLDRNPENYFAEVEQATFSPGTLVPGIDVSPDKMLQGRLFAYHDAHRYRVGANHQALPINRARNKVNNYQRDGQMRFDDNGGGSVYYEPNSFGGPKESPEDKQAAYPVQGIADSVSYDHYDHYTQAGDLYRLMSEDERTRLVENIVNAM-KPVEKEEIKLRQIEHFYKADPEYGKRVAEGLGL 477          
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_DESVM (Catalase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=katA PE=3 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.536e-32
Identity = 79/231 (34.20%), Postives = 122/231 (52.81%), Query Frame = -2
Query:  213 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKE--NNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVR 896
            G++P W +Y+Q +     ++  + P D+TK W     PL  VG L LN+N +N+FAE E  AFNP  VVPGI +S DKMLQ R+F+YGD  R+RLG N+ ++PVNA +CP  + H DG M    +    + Y P+ Y   +    +  P   I G        ++  + + QPG  +R   P +Q+       +A+ D     E++   V   ++AD + G  +A  L ++
Sbjct:  251 GDFPRWTMYVQVMPEKDAEKLPYHPFDLTKVWFHKDCPLIEVGVLELNRNPENYFAEVEQAAFNPANVVPGISFSPDKMLQGRLFSYGDAHRYRLGVNHHLIPVNAARCPVHSYHRDGAMRVDGNHGSTLAYEPNSYGEWQEQPDFAEPPLAIRGDAAHWNFREDDADYYDQPGRLFRLMTPQQQDELFQNTARAMGD--APEEIKRRHVGNCAKADPAYGAGVARALGLK 479          
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATE_BACPF (Catalase (Fragment) OS=Bacillus pseudofirmus GN=katE PE=3 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 2.006e-32
Identity = 64/120 (53.33%), Postives = 88/120 (73.33%), Query Frame = -2
Query:  540 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRL-GPNYLMLPVNAPKCPHRNNHYDGF 896
            G+YPE++L +Q I  + E  FDFD LD TK WPE+ +P++ +G++ LN+N+DN FAE E +AF+PG VVPGI ++ND +LQ R+F+Y DTQ  RL GPN+  LP+N P CP  NN  DG+
Sbjct:  276 GDYPEYELGVQLISEEDEFNFDFDVLDPTKIWPEEEVPVKIIGKMTLNRNVDNVFAETEQVAFHPGHVVPGIDFTNDPLLQGRLFSYTDTQLIRLGGPNFHELPINRPVCPFHNNQRDGY 395          
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_HELPJ (Catalase OS=Helicobacter pylori J99 GN=katA PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.006e-32
Identity = 82/222 (36.94%), Postives = 121/222 (54.50%), Query Frame = -2
Query:  255 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACI-------EKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTH-EVRSIWVSYWSQAD 896
            G++P+WK+ IQ +  +   ++ F P DVTK W     PL  VG + LNKN +N+FAE E  AF P  VVPGI YS D+MLQ R+F+YGDT R+RLG NY  +PVN P+CP  ++  DG+M   +     +Y PS     +  +    P   +    ++  +       E  + + QPG+ YRS   D +ER  +    +L    VTH E+    + ++ +AD
Sbjct:  253 GDFPKWKMSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPENYFAEVEQAAFTPANVVPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNRPRCPFHSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDPKFNLAHIEKEFEVWNWDYRAEDSDYYTQPGDYYRSLPADEKERLYDTIGGSLA--HVTHKEIVDKQLEHFKKAD 472          
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_BOVIN (Catalase OS=Bos taurus GN=CAT PE=1 SV=3)

HSP 1 Score: 139.813 bits (351), Expect = 2.006e-32
Identity = 81/198 (40.91%), Postives = 108/198 (54.55%), Query Frame = -2
Query:  318 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFM-HRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKAL 896
            GNYP W LYIQ +     + F F+P D+TK WP    PL PVG+LVLN+N  N+FAE E LAF+P  + PGI  S DKMLQ R+FAY DT RHRLGPNYL +PVN   CP+R    N   DG M  M ++    +Y+P+ +    H               + + +E   +F    +R+ S   D   +    ++K L
Sbjct:  272 GNYPSWTLYIQVMTFSEAEIFPFNPFDLTKVWPHGDYPLIPVGKLVLNRNPVNYFAEVEQLAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVN---CPYRARVANYQRDGPMCMMDNQGGAPNYYPNSFSAPEH---------------QPSALEHRTHFSGDVQRFNSANDDNVTQVRTFYLKVL 451          
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_BACFR (Catalase OS=Bacteroides fragilis GN=katA PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.006e-32
Identity = 82/233 (35.19%), Postives = 120/233 (51.50%), Query Frame = -2
Query:  216 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRY-----DPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 896
            G++P+WK  IQ +  +  D +  +P D+TK WP    PLQ VG L LN+N +N+FAE E  AFNP  +V GI +S DKMLQ R+F+YGD QR+RLG N   +PVN P+CP    H DG M    +      Y P+ Y      P +      +  DV      +     ++ + QPG+ +R    D Q+       +A+ D  +  + R +   Y  +AD + G  +A  L +
Sbjct:  251 GDFPKWKFQIQLMTEEEADNYRINPFDLTKVWPHKDFPLQDVGILELNRNPENYFAEVEQSAFNPMNIVEGIGFSPDKMLQGRLFSYGDAQRYRLGVNSEQIPVNKPRCPFHAFHRDGAMRVDGNYGSAKGYEPNSYGEWQDSPEKKEPPLKVHGDVFNYNERE---YDDDYYSQPGDLFRLMPADEQQLLFENTARAMGDAELFIKQRHVRNCY--KADPAYGTGVAQALGI 478          
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_VIBVY (Catalase OS=Vibrio vulnificus (strain YJ016) GN=VVA0294 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.619e-32
Identity = 83/235 (35.32%), Postives = 125/235 (53.19%), Query Frame = -2
Query:  216 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTR--------HAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 896
            GN+P+W LY++ + P    + D++ LD TK W +  +P + VG + LN+  DNFF E E  AF P  ++PGI  S D++LQ R+FAY DTQ +RLG N   LPVN+PK P  N++ DG  N       VD     Y+P+R         A     P   ++G  ++  I    +F Q G  YRS +   +   ++  +    +     EV++I VSY+ +AD+  G +LA   +V
Sbjct:  269 GNFPKWDLYVKVLSPKALSKLDYNGLDATKVWLD--VPEKKVGTMTLNRVPDNFFLETEQSAFAPSNIIPGIEPSEDRLLQGRLFAYADTQLYRLGANLFQLPVNSPKSPVANHNQDGPSNNSTGLGNVDSLDVNYEPSRLVNLTVDKQARAVETP---LSGHVQQQAIRNPRDFFQAGVLYRSLSEQDKADLIHN-LSGDLNKVNDAEVKAIMVSYFYRADKEYGTRLAKATDV 497          
The following BLAST results are available for this feature:
BLAST of CX671796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_VIBCH6.893e-3334.36Catalase OS=Vibrio cholerae GN=VC_1585 PE=3 SV=2[more]
CATA_HELPY6.893e-3338.16Catalase OS=Helicobacter pylori GN=katA PE=1 SV=2[more]
CATE_RHIME1.176e-3237.02Catalase C OS=Rhizobium meliloti GN=katE PE=2 SV=2[more]
CATA_BACSU1.176e-3233.77Vegetative catalase OS=Bacillus subtilis GN=katA P... [more]
CATA_DESVM1.536e-3234.20Catalase OS=Desulfovibrio vulgaris (strain Miyazak... [more]
CATE_BACPF2.006e-3253.33Catalase (Fragment) OS=Bacillus pseudofirmus GN=ka... [more]
CATA_HELPJ2.006e-3236.94Catalase OS=Helicobacter pylori J99 GN=katA PE=3 S... [more]
CATA_BOVIN2.006e-3240.91Catalase OS=Bos taurus GN=CAT PE=1 SV=3[more]
CATA_BACFR2.006e-3235.19Catalase OS=Bacteroides fragilis GN=katA PE=1 SV=1[more]
CATA_VIBVY2.619e-3235.32Catalase OS=Vibrio vulnificus (strain YJ016) GN=VV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13B12_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13B12-C23-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671796 ID=CX671796; Name=CX671796; organism=Citrus sinensis; type=EST; length=897bp
TTTGAACTTCATAAAACAGACTTTTATTAATTGAAACAACAGGAAAAGAG
TCACATAACATGCAAGTTTATTTTCTATATTACAATATACAACAGCAAAC
ATAGGATCGAAATTCTTCACATAGCTGCACCCTTGGTGTTCACTCCTTGC
TCACTCTTGGCAAGTCAAAAGCATCCAGTGTTCCAGTTCAAGTGACACCT
TCAAATGCTTGGCCTCACATTGAGACGAGAAGCTAGCTTCTGACCCAGAG
ATCTGTCGGCCTGAGACCAGTAAGAGACCCATATGCTGCGAACCTCATGG
GTGACACGTGGGTCACATAAAGCCTTAATCCATCGATTAAGGAACCTCTC
TTGCCTGTCTGGGGCCCAGGATCGGTATCTCTCTCCAGGCTGCTTGAAGT
TGTTTTCCTTCTCAATGCAAGCCTTCTCACGCCTTCCTGTAATTACATCA
GAAGGAATGGGATATCTCTCAGCATGACGAGTAGGATCATACCTCGAAGG
AAAGTAATCGACCTCCTCATCCCTGTGCATGAAATTCATGAAACCATCAT
AATGATTGTTGCGATGAGGACATTTGGGTGCATTAACTGGAAGCATCAAG
TAGTTGGGTCCAAGGCGATGCCTCTGGGTATCACCATAGGCAAAGATTCG
ACATTGGAGCATCTTATCATTTGAGTAGTAGATCCCAGGAACCACGATAC
CAGGGTTAAATGCAAGCATTTCATTTTCCGCAAAGAAATTATCGATGTTC
TTGTTCAAGACCAAGCGTCCAACTGGCTGCAGAGGGATGATGTCCTCAGG
CCACCACTTGGTTACGTCCAGTGGGTCAAAGTCAAATTGGTCCTCGTGAT
CGGGATCAATAGTCTGAATGTAGAGTTTCCACTCAGGATAGTTTCCA
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