CX671796

Overview
NameCX671796
Unique NameCX671796
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:186..1082. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_STAAC (Catalase OS=Staphylococcus aureus (strain COL) GN=katA PE=3 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 2.896e-31
Identity = 81/239 (33.89%), Postives = 126/239 (52.72%), Query Frame = -2
Query:  216 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 896
            G+YP+W +YIQ +  +       +P D+TK W  D  PL  VG   LN+N DN+F + E  AF P  ++PG+ +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+   ++D     ++ P P+D   G       + +N F+QPG+ +R  + D +ER       A+    VT +V+   + +  +AD   G+ +A  L +
Sbjct:  253 GDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAM--EGVTDDVKRRHIRHCYKADPEYGKGVAKALGI 485          
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_STAAB (Catalase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=katA PE=3 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 2.896e-31
Identity = 81/239 (33.89%), Postives = 126/239 (52.72%), Query Frame = -2
Query:  216 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 896
            G+YP+W +YIQ +  +       +P D+TK W  D  PL  VG   LN+N DN+F + E  AF P  ++PG+ +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+   ++D     ++ P P+D   G       + +N F+QPG+ +R  + D +ER       A+    VT +V+   + +  +AD   G+ +A  L +
Sbjct:  253 GDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAM--EGVTDDVKRRHIRHCYKADPEYGKGVAKALGI 485          
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_STAA8 (Catalase OS=Staphylococcus aureus (strain NCTC 8325) GN=katA PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 2.896e-31
Identity = 81/239 (33.89%), Postives = 126/239 (52.72%), Query Frame = -2
Query:  216 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 896
            G+YP+W +YIQ +  +       +P D+TK W  D  PL  VG   LN+N DN+F + E  AF P  ++PG+ +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+   ++D     ++ P P+D   G       + +N F+QPG+ +R  + D +ER       A+    VT +V+   + +  +AD   G+ +A  L +
Sbjct:  253 GDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAM--EGVTDDVKRRHIRHCYKADPEYGKGVAKALGI 485          
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_STAA3 (Catalase OS=Staphylococcus aureus (strain USA300) GN=katA PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.896e-31
Identity = 81/239 (33.89%), Postives = 126/239 (52.72%), Query Frame = -2
Query:  216 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 896
            G+YP+W +YIQ +  +       +P D+TK W  D  PL  VG   LN+N DN+F + E  AF P  ++PG+ +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+   ++D     ++ P P+D   G       + +N F+QPG+ +R  + D +ER       A+    VT +V+   + +  +AD   G+ +A  L +
Sbjct:  253 GDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAM--EGVTDDVKRRHIRHCYKADPEYGKGVAKALGI 485          
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_VIBPA (Catalase OS=Vibrio parahaemolyticus GN=VPA0305 PE=3 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 3.782e-31
Identity = 78/224 (34.82%), Postives = 121/224 (54.02%), Query Frame = -2
Query:  231 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMH-RDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSW-APDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLA 896
            GNYP+W LY++ + P+   + D++ LD TK W    +P + VG + LN+  +NFF E E  AF P  ++PGI  S D++LQ R+FAY DTQ +RLG N   LPVN P     N++ +G  N     + +V+Y PSR        ++      + G  ++  I K  +F Q G  YRS    DR +   N  +    +  +  ++++  VSY+ +AD+  G +LA
Sbjct:  269 GNYPKWDLYVKVLSPEALSKLDYNGLDATKVWLN--VPDRKVGTMTLNRLPENFFLETEQSAFAPSNLIPGIEPSEDRLLQGRLFAYADTQLYRLGANLFQLPVNRPLTSVNNHNQNGLSNNAQLSNGDVNYEPSRKLNLAEDNQFKAVETKLVGTVQQKAISKPRDFYQAGVLYRSMNEQDRSDLIAN--LAGDLNKVIDKDIKATMVSYFYRADKEYGSRLA 488          
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_RANRU (Catalase OS=Rana rugosa GN=cat PE=2 SV=3)

HSP 1 Score: 135.576 bits (340), Expect = 3.782e-31
Identity = 72/158 (45.57%), Postives = 96/158 (60.76%), Query Frame = -2
Query:  444 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAP-KCPHRNNHYDGFMNFM-HRDEEVDYFPSRY-----DPTRHAERYPIPSDV 896
            GNYP W  YIQ +  +  +++ F+P D+TK WP    PL PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ R+F+Y DT RHRLG NYL LPVN P K    N   DG M F  ++    +YFP+ +      P     ++ + +DV
Sbjct:  272 GNYPSWTFYIQVMTFEQAERYPFNPFDLTKIWPHKDYPLIPVGKLVLNRNPANYFAEVEQIAFDPSNMPPGIEPSPDKMLQGRLFSYPDTHRHRLGANYLQLPVNCPYKARVANYQRDGPMCFSDNQGGAPNYFPNSFSAPENQPAARESKFRVSADV 429          
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_CALJA (Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3)

HSP 1 Score: 135.576 bits (340), Expect = 3.782e-31
Identity = 71/146 (48.63%), Postives = 90/146 (61.64%), Query Frame = -2
Query:  474 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFM-HRDEEVDYFPSRYDPTRH 896
            GNYP W  YIQ +     + F F+P DVTK WP    PL PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ R+F+Y DT RHRLGPNYL +PVN   CP+R    N   DG M    ++    +Y+P+ +    H
Sbjct:  272 GNYPSWTFYIQVMTFSQAETFPFNPFDVTKIWPHKDYPLIPVGKLVLNRNPVNYFAEVEQIAFDPSNMPPGIEASPDKMLQGRLFSYPDTHRHRLGPNYLQIPVN---CPYRARVANYQRDGPMCMQDNQGGAPNYYPNSFGAPEH 414          
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_STAXY (Catalase A OS=Staphylococcus xylosus GN=katA PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.940e-31
Identity = 79/238 (33.19%), Postives = 126/238 (52.94%), Query Frame = -2
Query:  216 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPSRYDPTRHAERYPIPSDVITGRREKACI--EKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 896
            GN+P+WK+YIQ +  +       +P D+TK W +D  PL  VG   LN+N +N+F + E  AF P  +VPG+ +S DKMLQ R+F+YGDTQR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+         +Y  P+  I G+  +     + +N F+QPG+ +R  + + Q+   N     +    VT  ++   + +  +AD + GQ +A  + +
Sbjct:  250 GNFPKWKMYIQVMTEEQARNHKDNPFDLTKVWYKDEYPLIEVGEFELNRNPENYFQDVEQAAFAPTNIVPGLDFSPDKMLQGRLFSYGDTQRYRLGVNHWQIPVNQPKGVGMENICPFSR---DGHMRILDNNQGASTHYYPNSNGAFEDQPQYKKPALDIQGQAYEYDFREDDDNYFEQPGKLFRLLSSEEQQILFNNTANEMSP--VTDALKHRHIRHCYKADPAYGQGVAEAMGI 482          
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_MOUSE (Catalase OS=Mus musculus GN=Cat PE=1 SV=3)

HSP 1 Score: 135.191 bits (339), Expect = 4.940e-31
Identity = 73/142 (51.41%), Postives = 91/142 (64.08%), Query Frame = -2
Query:  489 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFMHRDE--EVDYFPSRY 896
            GNYP W  YIQ +     + F F+P D+TK WP    PL PVG+LVLNKN  N+FAE E +AF+P  + PGI  S DKMLQ R+FAY DT RHRLGPNYL +PVN   CP+R    N   DG M  MH ++    +Y+P+ +
Sbjct:  272 GNYPSWTFYIQVMTFKEAETFPFNPFDLTKVWPHKDYPLIPVGKLVLNKNPVNYFAEVEQMAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVN---CPYRARVANYQRDGPM-CMHDNQGGAPNYYPNSF 409          
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_BORPE (Catalase OS=Bordetella pertussis GN=katA PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.940e-31
Identity = 78/231 (33.77%), Postives = 122/231 (52.81%), Query Frame = -2
Query:  213 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEK--ENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVR 896
            G +P W L +Q +       +  +P D+TK WP    PL  VG L LNKN +N+FAE E  AF P  VVPGI +S DKMLQ R+F+YGDT R+RLG N+  +PVNAP+CP  + H DG      +    ++Y P+ +   R A+    P   + G+       +  E+ + QPG  +R    D++++      + +    V  E++   + ++ +AD +    +A  L ++
Sbjct:  254 GQFPRWTLKVQVMPEAEAATYHINPFDLTKVWPHADYPLIEVGVLELNKNPENYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDTHRYRLGINHHQIPVNAPRCPFHSFHRDGMGRVDGNGGATLNYEPNSFGEWREAKHAAEPPLALDGQAADRWNHRVDEDYYSQPGALFRLMNDDQKQQLFGNIGRHMAG--VPEEIQRRQLEHFRRADPAYAAGVAKALGLK 482          
The following BLAST results are available for this feature:
BLAST of CX671796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_STAAC2.896e-3133.89Catalase OS=Staphylococcus aureus (strain COL) GN=... [more]
CATA_STAAB2.896e-3133.89Catalase OS=Staphylococcus aureus (strain bovine R... [more]
CATA_STAA82.896e-3133.89Catalase OS=Staphylococcus aureus (strain NCTC 832... [more]
CATA_STAA32.896e-3133.89Catalase OS=Staphylococcus aureus (strain USA300) ... [more]
CATA_VIBPA3.782e-3134.82Catalase OS=Vibrio parahaemolyticus GN=VPA0305 PE=... [more]
CATA_RANRU3.782e-3145.57Catalase OS=Rana rugosa GN=cat PE=2 SV=3[more]
CATA_CALJA3.782e-3148.63Catalase OS=Callithrix jacchus GN=CAT PE=2 SV=3[more]
CATA_STAXY4.940e-3133.19Catalase A OS=Staphylococcus xylosus GN=katA PE=3 ... [more]
CATA_MOUSE4.940e-3151.41Catalase OS=Mus musculus GN=Cat PE=1 SV=3[more]
CATA_BORPE4.940e-3133.77Catalase OS=Bordetella pertussis GN=katA PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13B12_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13B12-C23-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671796 ID=CX671796; Name=CX671796; organism=Citrus sinensis; type=EST; length=897bp
TTTGAACTTCATAAAACAGACTTTTATTAATTGAAACAACAGGAAAAGAG
TCACATAACATGCAAGTTTATTTTCTATATTACAATATACAACAGCAAAC
ATAGGATCGAAATTCTTCACATAGCTGCACCCTTGGTGTTCACTCCTTGC
TCACTCTTGGCAAGTCAAAAGCATCCAGTGTTCCAGTTCAAGTGACACCT
TCAAATGCTTGGCCTCACATTGAGACGAGAAGCTAGCTTCTGACCCAGAG
ATCTGTCGGCCTGAGACCAGTAAGAGACCCATATGCTGCGAACCTCATGG
GTGACACGTGGGTCACATAAAGCCTTAATCCATCGATTAAGGAACCTCTC
TTGCCTGTCTGGGGCCCAGGATCGGTATCTCTCTCCAGGCTGCTTGAAGT
TGTTTTCCTTCTCAATGCAAGCCTTCTCACGCCTTCCTGTAATTACATCA
GAAGGAATGGGATATCTCTCAGCATGACGAGTAGGATCATACCTCGAAGG
AAAGTAATCGACCTCCTCATCCCTGTGCATGAAATTCATGAAACCATCAT
AATGATTGTTGCGATGAGGACATTTGGGTGCATTAACTGGAAGCATCAAG
TAGTTGGGTCCAAGGCGATGCCTCTGGGTATCACCATAGGCAAAGATTCG
ACATTGGAGCATCTTATCATTTGAGTAGTAGATCCCAGGAACCACGATAC
CAGGGTTAAATGCAAGCATTTCATTTTCCGCAAAGAAATTATCGATGTTC
TTGTTCAAGACCAAGCGTCCAACTGGCTGCAGAGGGATGATGTCCTCAGG
CCACCACTTGGTTACGTCCAGTGGGTCAAAGTCAAATTGGTCCTCGTGAT
CGGGATCAATAGTCTGAATGTAGAGTTTCCACTCAGGATAGTTTCCA
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