CX671796

Overview
NameCX671796
Unique NameCX671796
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:186..1082. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_BORPA (Catalase OS=Bordetella parapertussis GN=katA PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.940e-31
Identity = 78/231 (33.77%), Postives = 122/231 (52.81%), Query Frame = -2
Query:  213 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEK--ENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVR 896
            G +P W L +Q +       +  +P D+TK WP    PL  VG L LNKN +N+FAE E  AF P  VVPGI +S DKMLQ R+F+YGDT R+RLG N+  +PVNAP+CP  + H DG      +    ++Y P+ +   R A+    P   + G+       +  E+ + QPG  +R    D++++      + +    V  E++   + ++ +AD +    +A  L ++
Sbjct:  254 GQFPRWTLKVQVMPEAEAATYHINPFDLTKVWPHADYPLIEVGVLELNKNPENYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDTHRYRLGINHHQIPVNAPRCPFHSFHRDGMGRVDGNGGATLNYEPNSFGEWREAKHAAEPPLALDGQAADRWNHRVDEDYYSQPGALFRLMNDDQKQQLFGNIGRHMAG--VPEEIQRRQLEHFRRADPAYAAGVAKALGLK 482          
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_BORBR (Catalase OS=Bordetella bronchiseptica GN=katA PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.940e-31
Identity = 78/231 (33.77%), Postives = 122/231 (52.81%), Query Frame = -2
Query:  213 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEK--ENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVR 896
            G +P W L +Q +       +  +P D+TK WP    PL  VG L LNKN +N+FAE E  AF P  VVPGI +S DKMLQ R+F+YGDT R+RLG N+  +PVNAP+CP  + H DG      +    ++Y P+ +   R A+    P   + G+       +  E+ + QPG  +R    D++++      + +    V  E++   + ++ +AD +    +A  L ++
Sbjct:  254 GQFPRWTLKVQVMPEAEAATYHINPFDLTKVWPHADYPLIEVGVLELNKNPENYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDTHRYRLGINHHQIPVNAPRCPFHSFHRDGMGRVDGNGGATLNYEPNSFGEWREAKHAAEPPLALDGQAADRWNHRVDEDYYSQPGALFRLMNDDQKQQLFGNIGRHMAG--VPEEIQRRQLEHFRRADPAYAAGVAKALGLK 482          
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_EMENI (Catalase A OS=Emericella nidulans GN=catA PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 6.452e-31
Identity = 70/177 (39.55%), Postives = 102/177 (57.63%), Query Frame = -2
Query:  375 YPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHA-----ERYPIPSDVITGRREKACIEKENNFKQPGERY 890
            YP+W   IQ I  + +D+F+FD  D TK WPE+ +PL+ VG L LN+NID FF E E +AF    +VPGI +S+D +LQ R F+Y DTQ  RLG N+  +P+N P CP  N++ DG          V+Y+P+R++    A     + +P P   ITGR+ +    K   +    + +
Sbjct:  296 YPKWDFAIQAIPEEDQDKFEFDIFDATKVWPEEQVPLRVVGELELNRNIDEFFPETEQVAFCTSHIVPGIDFSDDPLLQGRNFSYQDTQISRLGVNWEEIPINRPVCPFLNHNRDGAKRHRITKGTVNYWPNRFEANPPASDKGFKSHPAP---ITGRKRRDLTPKFKEYHNQAQLF 469          
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_STAAU (Catalase OS=Staphylococcus aureus GN=katA PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.426e-31
Identity = 80/239 (33.47%), Postives = 126/239 (52.72%), Query Frame = -2
Query:  216 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPS---RYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 896
            G+YP+W +YIQ +  +       +P D+TK W  D  PL  VG   LN+N DN+F + E  AF P  ++PG+ +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     ++P+   ++D     ++ P P+D   G       + +N F+QPG+ +R  + D +ER       A+    VT +V+   + +  +AD   G+ +A  L +
Sbjct:  253 GDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEFELNRNPDNYFTDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHHYPNNHGKFDSQPEYKKPPFPTDGY-GYEYNQRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAM--EGVTDDVKRRHIRHCYKADPEYGKGVAKALGI 485          
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_RAT (Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3)

HSP 1 Score: 134.42 bits (337), Expect = 8.426e-31
Identity = 72/142 (50.70%), Postives = 91/142 (64.08%), Query Frame = -2
Query:  489 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFMHRDE--EVDYFPSRY 896
            GNYP W  YIQ +     + F F+P D+TK WP    PL PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ R+FAY DT RHRLGPNYL +PVN   CP+R    N   DG M  MH ++    +Y+P+ +
Sbjct:  272 GNYPSWTFYIQVMTFKEAETFPFNPFDLTKVWPHKDYPLIPVGKLVLNRNPANYFAEVEQMAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVN---CPYRARVANYQRDGPM-CMHDNQGGAPNYYPNSF 409          
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_ASPFU (Catalase A OS=Aspergillus fumigatus GN=catA PE=3 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 8.426e-31
Identity = 62/135 (45.93%), Postives = 89/135 (65.93%), Query Frame = -2
Query:  486 YPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYD 890
            YP+W   IQ I  + +D F+FD LD TK WPED++PL+ +G L LN+N+D FF + E +AF    +VPGI +++D +LQ R F+Y DTQ  RLG N+  LP+N P CP  N++ DG M        V+Y+P+R++
Sbjct:  296 YPKWDFAIQVIPEEKQDDFEFDILDATKIWPEDLVPLRVIGELELNRNVDEFFPQTEQVAFCTSHIVPGIDFTDDPLLQGRNFSYFDTQISRLGINWEELPINRPVCPVLNHNRDGQMRHRITQGTVNYWPNRFE 430          
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_CAVPO (Catalase OS=Cavia porcellus GN=CAT PE=2 SV=4)

HSP 1 Score: 133.65 bits (335), Expect = 1.437e-30
Identity = 65/112 (58.04%), Postives = 77/112 (68.75%), Query Frame = -2
Query:  561 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR 896
            GNYP W LYIQ +       F F+P D+TK WP    PL PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ R+FAY DT RHRLGPNYL +PVN   CP+R
Sbjct:  272 GNYPSWTLYIQVMTFQQAQSFPFNPFDLTKIWPHKDYPLIPVGKLVLNRNPVNYFAEVEQIAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVN---CPYR 380          
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_STAWA (Catalase OS=Staphylococcus warneri GN=katA PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.877e-30
Identity = 82/239 (34.31%), Postives = 124/239 (51.88%), Query Frame = -2
Query:  216 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDE--EVDYFPSR---YDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 896
            G+YP+WK+YIQ +  +       +P D+TK W     PL  VG   LN+N +N+F + E  AF P  +VPG+ YS DKMLQ R+F YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++     Y+P+    YD     ++ P P+D   G       + +N F+QPG+ +R  + + +ER       A+    VT +V+   + +  +AD   G+ +A  L +
Sbjct:  253 GDYPKWKMYIQVMTEEQARNHKDNPFDLTKVWYHGDYPLIEVGEFELNRNPNNYFQDVEQAAFAPTNIVPGLDYSPDKMLQGRLFPYGDAQRYRLGVNHWQIPVNQPKGVGIENLCPFSR---DGQMRILDDNQGGGPHYYPNNQGVYDSQPEFKKPPFPADG-DGYEYNQRQDDDNYFEQPGKLFRLQSDEAKERIFTNTANAM--DGVTEDVKRRHIRHCYKADPDYGKGVAKALGI 485          
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_CANFA (Catalase OS=Canis familiaris GN=CAT PE=1 SV=3)

HSP 1 Score: 133.265 bits (334), Expect = 1.877e-30
Identity = 68/138 (49.28%), Postives = 88/138 (63.77%), Query Frame = -2
Query:  489 GNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAP-KCPHRNNHYDGFMNFM-HRDEEVDYFPSRY 896
            GNYP W  YIQ +     + F F+P D+TK WP    PL PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ R+FAY DT RHRLGPNYL +PVN P +    N   DG M  + ++    +Y+P+ +
Sbjct:  272 GNYPSWTFYIQVMTFSQAETFPFNPFDLTKIWPHQDYPLIPVGKLVLNRNPVNYFAEVEQMAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVNCPFRARVANYQRDGPMCMLDNQGGAPNYYPNSF 409          
BLAST of CX671796 vs. ExPASy Swiss-Prot
Match: CATA_DROME (Catalase OS=Drosophila melanogaster GN=Cat PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 3.202e-30
Identity = 65/144 (45.14%), Postives = 92/144 (63.89%), Query Frame = -2
Query:  465 YPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAP-KCPHRNNHYDGFMNFM-HRDEEVDYFPSRYDPTRHAER 890
            +P W +YIQ +  +   +F ++P DVTK W +   PL PVG++VL++N  N+FAE E +AF+P  +VPG+  S DKML  R+F+Y DT RHRLGPNYL +PVN P K    N   DG MN   ++D   +YFP+ ++  +   R
Sbjct:  272 FPSWTMYIQVMTYEQAKKFKYNPFDVTKVWSQKEYPLIPVGKMVLDRNPKNYFAEVEQIAFSPAHLVPGVEPSPDKMLHGRLFSYSDTHRHRLGPNYLQIPVNCPYKVKIENFQRDGAMNVTDNQDGAPNYFPNSFNGPQECPR 415          
The following BLAST results are available for this feature:
BLAST of CX671796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_BORPA4.940e-3133.77Catalase OS=Bordetella parapertussis GN=katA PE=3 ... [more]
CATA_BORBR4.940e-3133.77Catalase OS=Bordetella bronchiseptica GN=katA PE=3... [more]
CATA_EMENI6.452e-3139.55Catalase A OS=Emericella nidulans GN=catA PE=2 SV=... [more]
CATA_STAAU8.426e-3133.47Catalase OS=Staphylococcus aureus GN=katA PE=3 SV=... [more]
CATA_RAT8.426e-3150.70Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3[more]
CATA_ASPFU8.426e-3145.93Catalase A OS=Aspergillus fumigatus GN=catA PE=3 S... [more]
CATA_CAVPO1.437e-3058.04Catalase OS=Cavia porcellus GN=CAT PE=2 SV=4[more]
CATA_STAWA1.877e-3034.31Catalase OS=Staphylococcus warneri GN=katA PE=3 SV... [more]
CATA_CANFA1.877e-3049.28Catalase OS=Canis familiaris GN=CAT PE=1 SV=3[more]
CATA_DROME3.202e-3045.14Catalase OS=Drosophila melanogaster GN=Cat PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13B12_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13B12-C23-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671796 ID=CX671796; Name=CX671796; organism=Citrus sinensis; type=EST; length=897bp
TTTGAACTTCATAAAACAGACTTTTATTAATTGAAACAACAGGAAAAGAG
TCACATAACATGCAAGTTTATTTTCTATATTACAATATACAACAGCAAAC
ATAGGATCGAAATTCTTCACATAGCTGCACCCTTGGTGTTCACTCCTTGC
TCACTCTTGGCAAGTCAAAAGCATCCAGTGTTCCAGTTCAAGTGACACCT
TCAAATGCTTGGCCTCACATTGAGACGAGAAGCTAGCTTCTGACCCAGAG
ATCTGTCGGCCTGAGACCAGTAAGAGACCCATATGCTGCGAACCTCATGG
GTGACACGTGGGTCACATAAAGCCTTAATCCATCGATTAAGGAACCTCTC
TTGCCTGTCTGGGGCCCAGGATCGGTATCTCTCTCCAGGCTGCTTGAAGT
TGTTTTCCTTCTCAATGCAAGCCTTCTCACGCCTTCCTGTAATTACATCA
GAAGGAATGGGATATCTCTCAGCATGACGAGTAGGATCATACCTCGAAGG
AAAGTAATCGACCTCCTCATCCCTGTGCATGAAATTCATGAAACCATCAT
AATGATTGTTGCGATGAGGACATTTGGGTGCATTAACTGGAAGCATCAAG
TAGTTGGGTCCAAGGCGATGCCTCTGGGTATCACCATAGGCAAAGATTCG
ACATTGGAGCATCTTATCATTTGAGTAGTAGATCCCAGGAACCACGATAC
CAGGGTTAAATGCAAGCATTTCATTTTCCGCAAAGAAATTATCGATGTTC
TTGTTCAAGACCAAGCGTCCAACTGGCTGCAGAGGGATGATGTCCTCAGG
CCACCACTTGGTTACGTCCAGTGGGTCAAAGTCAAATTGGTCCTCGTGAT
CGGGATCAATAGTCTGAATGTAGAGTTTCCACTCAGGATAGTTTCCA
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