CX671791

Overview
NameCX671791
Unique NameCX671791
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length712
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2298 contig Csv1_Contig2298:36..747. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671791 vs. ExPASy Swiss-Prot
Match: FPRA_MYCLE (NADPH-ferredoxin reductase fprA OS=Mycobacterium leprae GN=fprA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.467e-18
Identity = 55/158 (34.81%), Postives = 84/158 (53.16%), Query Frame = 1
Query:   10 AVGTGEFEDLDCGMVLKSIGYKSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVASISEDLEQGVLASSSGLPKPGREGLLQLLDNRNVRPVPFSAWEKIDSEEKRLGSLRNKPKEKLTTYEDLLKV 483
            A  TG  E+L   ++++SIGY+ VP  GLPFD+    +PN  GRV    +G  ++     YV GW+KRGPTG+I TN   +++TV ++ E+L         G     R  L + L  R  + V  + W+ ID  E+  G    +P+ KL    +LL++
Sbjct:  307 AKDTGVREELPAQLIVRSIGYRGVPTPGLPFDDSSVTIPNTNGRV----NGSRNE-----YVVGWIKRGPTGVIGTNKKDSQDTVDTLMENLAGANDTEKFGADHADR--LAEWLAERQPKLVTSAHWQAIDRFERAAGEPHGRPRVKLPNLAELLRI 453          
BLAST of CX671791 vs. ExPASy Swiss-Prot
Match: ADRO_DICDI (Probable NADPH:adrenodoxin oxidoreductase, mitochondrial OS=Dictyostelium discoideum GN=fdxr PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.503e-18
Identity = 56/161 (34.78%), Postives = 90/161 (55.90%), Query Frame = 1
Query:   10 AVGTGEFEDLDCGMVLKSIGY---KSVPVNGLPFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVASISEDLEQGVLASSSGLPKPGREGLLQLLDNRNVRPVPFSAWEKIDSEEKRLGSLRNKPKEKLTTYEDLLKV 483
            A+G+GEFE ++C  + +SIGY   K  P   +PFD +   +PN  G+VL+  + D  +  NGLYV GWLK GP+G I      +EET + I +D E     +++     G   +  LL   N + + F+ ++KI+SEE + G  + K  EK+  +++L  +
Sbjct:  356 AIGSGEFEIIECSSLFRSIGYTGTKQFP--SVPFDFNSVSIPNKYGKVLEEPNSD--KFINGLYVSGWLKGGPSGSIPNISANSEETASIIHQDYESNQFINNNNNNDGGHNSITSLL-QPNHKIINFNDYKKIESEEVKRGKEKGKLLEKIIVFDELKNI 511          
BLAST of CX671791 vs. ExPASy Swiss-Prot
Match: ADRO_SCHPO (Probable NADPH:adrenodoxin oxidoreductase, mitochondrial OS=Schizosaccharomyces pombe GN=arh1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.970e-12
Identity = 48/158 (30.38%), Postives = 75/158 (47.47%), Query Frame = 1
Query:   25 EFEDLDCGMVLKSIGYKSVPVNGL-----PFDNHKGIVPNIRGRVLKNISGDSSQVENGLYVCGWLKRGPTGIIATNLYCAEETVASISEDLEQGVLASSSGLPKPGREGLLQLLDNRNVRPVPFSAWEKIDSEEKRLGSLRNKPKEKLTTYEDLLKV 483
            +F  +   + ++SIGYKS+P+ G+     PFD+ KGIV N+ G V             G+Y  GW+K GP G+IAT +  A  T  +I++D +     S     K  + G   L  N     + +  W+ I + E   G       EK  + ED++K+
Sbjct:  322 KFTTIPAQLFIRSIGYKSMPLPGMKDVGVPFDDAKGIVKNVNGFV-----------RPGIYTSGWVKHGPIGVIATTMMDAFATADTITKDWK-----SKKEFLKNSKLGWDGLKKNIKTPVIHWKDWKVIRNAEIERGLRHESLSEKFRSNEDMIKL 463          
The following BLAST results are available for this feature:
BLAST of CX671791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
FPRA_MYCLE1.467e-1834.81NADPH-ferredoxin reductase fprA OS=Mycobacterium l... [more]
ADRO_DICDI2.503e-1834.78Probable NADPH:adrenodoxin oxidoreductase, mitocho... [more]
ADRO_SCHPO5.970e-1230.38Probable NADPH:adrenodoxin oxidoreductase, mitocho... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13B09_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13B09-C17-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671791 ID=CX671791; Name=CX671791; organism=Citrus sinensis; type=EST; length=712bp
AAACAGTATGCTGTGGGTACTGGTGAATTTGAAGACCTTGATTGTGGGAT
GGTGCTAAAAAGCATTGGTTACAAATCAGTACCAGTCAATGGTTTGCCCT
TTGATAATCACAAAGGTATAGTTCCAAATATTAGAGGTCGGGTTCTAAAG
AATATTTCAGGAGATTCTTCACAGGTTGAAAATGGTTTATATGTCTGTGG
GTGGTTAAAGAGAGGACCAACGGGAATAATTGCCACAAATCTTTACTGTG
CTGAGGAAACTGTTGCTAGCATATCGGAAGACCTTGAACAAGGAGTACTA
GCGTCCTCATCAGGATTGCCAAAGCCTGGCCGAGAGGGACTCCTGCAGTT
ACTGGACAATAGAAATGTTAGACCTGTACCATTCAGTGCTTGGGAAAAGA
TTGACTCTGAAGAAAAGAGGCTTGGAAGTTTGAGGAACAAACCAAAGGAG
AAATTGACAACTTATGAAGATTTGCTGAAAGTAGCCACATAATTAATTAA
AAGAGTGGAGATTTTCCCATCCTTTAAAATTCTCAAAACACTCCTCTTTC
TTACATTTATCATTTTAACCTTTGGCAATTACAATATAAGACAGAACACA
TTTTTTTTATACATAATTTTCTCACATCCCATGGAGATCTTTGATCTTTG
TAAGGAGCTTTATGGATTATTCAGTTTTCTTCCTTCATTATGAAAGATTA
ATGAATTTTATA
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