CX671783
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671783 vs. ExPASy Swiss-Prot
Match: GLYA_CHLCH (Serine hydroxymethyltransferase OS=Chlorobium chlorochromatii (strain CaD3) GN=glyA PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.030e-42 Identity = 95/199 (47.74%), Postives = 130/199 (65.33%), Query Frame = 3 Query: 198 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAI 794 L+ D E+ I +E RQ + LELI SENFTS +VMQA GSVMTNKY+EGYPG RYYGG E++D+AE+L + RA + F + VNVQ SGS +N V ++LKP D+IM LDL HGGHL+HG ++ FE Y ++ TG ID +++E+ A RPKLI+ GASAY++ +D++ R + +K A+ Sbjct: 6 LQKQDAEVFASIANETKRQTETLELIASENFTSRAVMQACGSVMTNKYAEGYPGKRYYGGCEFVDVAENLARDRAKKLFGCE----YVNVQPHSGSSANMAVLFSVLKPGDKIMGLDLSHGGHLTHG-----SSVNFSGQMFEAHSYGVDRETGCIDMNKVEEMAMQVRPKLIIGGASAYSQGFDFKAFRAIADKVGAL 195
BLAST of CX671783 vs. ExPASy Swiss-Prot
Match: GLYA_ACIC5 (Serine hydroxymethyltransferase OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=glyA PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.030e-42 Identity = 87/200 (43.50%), Postives = 129/200 (64.50%), Query Frame = 3 Query: 183 QLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNK 782 +++ L DP++A I+HE RQ +GLE+I SENF S +V++A GSV TNKY+EGYPG RYYGG E+ D+ E+L + RA + F + NVQ SGS +N Y ++++P D I+ LDL HGGHL+HG+ K++ + Y + + T IDYD+LE A +PK+I+ G SAY R++D+ R+R++ +K Sbjct: 4 RMSLSLAQSDPDVAAAIDHEVLRQHEGLEMIASENFVSRAVLEAAGSVFTNKYAEGYPGRRYYGGCEFADVVENLARDRAKQLFGAE----HANVQPHSGSQANAAAYMSIIQPGDTILGLDLAHGGHLTHGH-----KLNFSGKLYRVASYGVRKDTETIDYDELEAIAVREQPKMIIGGGSAYPRIFDFARMRQIADK 194
BLAST of CX671783 vs. ExPASy Swiss-Prot
Match: GLYA_THEAB (Serine hydroxymethyltransferase OS=Thermosipho africanus (strain TCF52B) GN=glyA PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.346e-42 Identity = 89/191 (46.60%), Postives = 125/191 (65.45%), Query Frame = 3 Query: 210 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNK 782 DPEI D+I E RQ GLELI SENF S++V++A+GSV+TNKY+EGYPG RYYGG E++D+AE L + RA E F + NVQ SGS +N Y A+ +P D IM + L HGGHL+HG ++ + +PY +N T IDYD++ A +PK+IVAG SAY+R+ D+++ R++ ++ Sbjct: 9 DPEIYDVILKEWERQEYGLELIASENFASLAVIEAMGSVLTNKYAEGYPGRRYYGGCEWVDVAEKLARDRAKELFNVK----YANVQPHSGSQANMGAYFAVSEPGDTIMGMSLSHGGHLTHG-----ASVNFSGRIYNVVPYGVNPETEVIDYDEVRDLALKHKPKIIVAGGSAYSRIIDFKKFREIADE 190
BLAST of CX671783 vs. ExPASy Swiss-Prot
Match: GLYA_PELPB (Serine hydroxymethyltransferase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=glyA PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.346e-42 Identity = 95/195 (48.72%), Postives = 127/195 (65.13%), Query Frame = 3 Query: 198 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNK 782 L+ D E+ + I E RQ + LELI SENFTS +VMQA GSVMTNKY+EGYPG RYYGG E++D+AE+L + RA + F D VNVQ SGS +N V ++LKP DRIM LDL HGGHL+HG ++ +E Y ++ TG ID +++E+ A RPKLI+ GASAY++ +D + R + +K Sbjct: 6 LQKQDSELFEAIAKETGRQTETLELIASENFTSRAVMQACGSVMTNKYAEGYPGKRYYGGCEFVDIAENLARDRAKKLFGCD----YVNVQPHSGSSANMAVLFSVLKPGDRIMGLDLSHGGHLTHG-----SSVNFSGQMYEAHSYGVDRETGCIDMNKVEELALQVRPKLIICGASAYSQGFDVKAFRVIADK 191
BLAST of CX671783 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBM (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=glyA PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.346e-42 Identity = 88/195 (45.13%), Postives = 132/195 (67.69%), Query Frame = 3 Query: 198 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNK 782 L+ DPE+ D+I+ E+ RQ +ELI SENFTS+SVM+A+GS++TNKY+EGYP RYYGG E++D E L ++R + F + NVQ SGS +N VY ++L+ D I+ +DL HGGHL+HG ++ + + Y +++ T IDY+QL+K A RPK+IV+GASAY R+ D+++IR++C++ Sbjct: 6 LKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMEAMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFAAE----HANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTHG-----SPVNFSGKLYNFISYGVDKETETIDYEQLKKIALENRPKMIVSGASAYPRIIDFQKIREICDE 191
BLAST of CX671783 vs. ExPASy Swiss-Prot
Match: GLYA_CLOB6 (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=glyA PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.346e-42 Identity = 88/195 (45.13%), Postives = 132/195 (67.69%), Query Frame = 3 Query: 198 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNK 782 L+ DPE+ D+I+ E+ RQ +ELI SENFTS+SVM+A+GS++TNKY+EGYP RYYGG E++D E L ++R + F + NVQ SGS +N VY ++L+ D I+ +DL HGGHL+HG ++ + + Y +++ T IDY+QL+K A RPK+IV+GASAY R+ D+++IR++C++ Sbjct: 6 LKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMEAMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFAAE----HANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTHG-----SPVNFSGKLYNFISYGVDKETETIDYEQLKKIALENRPKMIVSGASAYPRIIDFQKIREICDE 191
BLAST of CX671783 vs. ExPASy Swiss-Prot
Match: GLYA_CLOAB (Serine hydroxymethyltransferase OS=Clostridium acetobutylicum GN=glyA PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.346e-42 Identity = 89/195 (45.64%), Postives = 128/195 (65.64%), Query Frame = 3 Query: 198 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNK 782 ++V D E+ IIE E ARQ +ELI SENFTS +VM+A+GS +TNKY+EGYPG RYYGG +D E L ++RA + F+ + NVQ SGS +N VY A+LKP D IM ++L GGHL+HG ++ F + Y +++ T IDY+ K A +PK+IV+GASAY+R+ D+++IR++C++ Sbjct: 6 IKVSDSEVYSIIEEENARQENNIELIASENFTSKAVMEAMGSYLTNKYAEGYPGKRYYGGCYVVDKVEELARERAKKLFKAE----HANVQPHSGSQANMAVYFAVLKPGDTIMGMNLTDGGHLTHG-----SPVNFSGKLFNIIAYGVSDETEQIDYEAFRKKALECKPKMIVSGASAYSRIIDFKKIREICDE 191
BLAST of CX671783 vs. ExPASy Swiss-Prot
Match: GLYA1_PSEPF (Serine hydroxymethyltransferase 1 OS=Pseudomonas fluorescens (strain Pf0-1) GN=glyA1 PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.758e-42 Identity = 91/195 (46.67%), Postives = 128/195 (65.64%), Query Frame = 3 Query: 198 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNK 782 L+ DP IA +I+ E+ RQ LELI SEN+ S V+QA GS++TNKY+EGYPG RYYGG + +D E+L +RA + F + VNVQ SGS +N V+ A+L+P DRI+ + L HGGHL+HG ++ FF+ Y L + + +DYDQ+E A RPK+I+AGASAY+R+ D+ R RK+C++ Sbjct: 3 LQNFDPAIARLIDRERNRQETHLELIASENYVSEEVLQAQGSLLTNKYAEGYPGRRYYGGCKVVDEIENLAIERARKLFGCE----YVNVQPHSGSQANQAVFLAVLEPGDRILGMSLAHGGHLTHG-----ASVNFSGKFFQAFTYGLEKDSETLDYDQMEDLAREHRPKMIIAGASAYSRVIDFPRFRKICDE 188
BLAST of CX671783 vs. ExPASy Swiss-Prot
Match: GLYA_SYNFM (Serine hydroxymethyltransferase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=glyA PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.295e-42 Identity = 93/195 (47.69%), Postives = 127/195 (65.13%), Query Frame = 3 Query: 198 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNK 782 LE +DPEIAD+I E+ RQ LELI SENF S +V +A GSV+TNKY+EGYPG RYYGG E++DMAE L Q+RA + F D E NVQ SGS +N ++ A+L+P D ++ +DL GGHL+HG +S + + Y + + T ID+DQ+ + A RPKLI+AGASAY R+ D+ R ++ + Sbjct: 4 LERIDPEIADVICEEEKRQRGKLELIASENFVSEAVREAQGSVLTNKYAEGYPGKRYYGGCEFVDMAERLAQERAKKLF--DAEY--ANVQPHSGSQANMAIFFAVLQPGDTVLGMDLRQGGHLTHG-----SPVSFSGKLYNVVSYGVRKDTEQIDFDQVARLAREHRPKLIIAGASAYPRIIDFARFGQIAKE 189
BLAST of CX671783 vs. ExPASy Swiss-Prot
Match: GLYA_CHLL2 (Serine hydroxymethyltransferase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=glyA PE=3 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 2.295e-42 Identity = 94/199 (47.24%), Postives = 130/199 (65.33%), Query Frame = 3 Query: 198 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYERIRKVCNKQKAI 794 L + D E+ + I E RQ + LELI SENFTS +VMQA GS+MTNKY+EGYPG RYYGG E++D+AE+L + RA + F VNVQ SGS +N V ++LKP DRIM LDL HGGHL+HG ++ F+ Y ++ TG ID +++E+ A RPKLI+ GASAY++ +D++ R++ +K A+ Sbjct: 6 LRMQDKEVFEAIAGETLRQTETLELIASENFTSRAVMQACGSLMTNKYAEGYPGKRYYGGCEFVDIAENLARDRAKKLFGCQ----YVNVQPHSGSSANMAVLFSVLKPGDRIMGLDLSHGGHLTHG-----SPVNFSGQLFDAHSYGVDRETGCIDMNRVEELALEVRPKLIICGASAYSQGFDFKAFREIADKVGAL 195 The following BLAST results are available for this feature:
BLAST of CX671783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671783 ID=CX671783; Name=CX671783; organism=Citrus sinensis; type=EST; length=795bpback to top |