CX671782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_ALKMQ (Serine hydroxymethyltransferase OS=Alkaliphilus metalliredigens (strain QYMF) GN=glyA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.782e-31 Identity = 70/150 (46.67%), Postives = 97/150 (64.67%), Query Frame = -1 Query: 415 INQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQ 861 I++A+FPGLQGGP H I AVA K+A P +KAYQEQV+ N + L + G++LVS GT+ HL+L++L+NK I G E++ + V I NKNT+P D S V GIR+GTPA+T+RG EE+ K+A + + K+ SE Q Sbjct: 248 IDKAIFPGLQGGPLMHVIAAKAVAFKEALEPGFKAYQEQVIKNAKALGEELKKQGFDLVSDGTDTHLLLIDLRNKNITGKDAERLFDEVGITVNKNTIPFDPQSPFVTSGIRIGTPAVTTRGMKEEEMKKIAGVMNIIIDHPEKV-SEAQ 396
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_ACIC1 (Serine hydroxymethyltransferase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=glyA PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.782e-31 Identity = 75/191 (39.27%), Postives = 107/191 (56.02%), Query Frame = -1 Query: 292 INQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFPTIGFEK 861 +++AVFPGLQGGPHNHT +AVAL +A PE++ Y +++N + A+ LL G++LVSGGT+NHL+LV+L +K + G V + L+ I N NTVP D P GIR+GTPA+TSRG + ++A + D K E A Q ++ +V E K FPT G ++ Sbjct: 253 LDKAVFPGLQGGPHNHTTAAIAVALLEAMQPEFRDYARNIVANAAVLAEELLARGFDLVSGGTDNHLILVDLTSKGVAGKPVARALDRAGIELNYNTVPFDPRKPFDPSGIRLGTPAVTSRGMGPAEMRQIAAWIDEVTTAVAKGDEEA-------LAAVEQ---------RVAGEVRELTKNFPTPGLDR 427
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_XYLFA (Serine hydroxymethyltransferase OS=Xylella fastidiosa GN=glyA PE=3 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 4.940e-31 Identity = 72/163 (44.17%), Postives = 98/163 (60.12%), Query Frame = -1 Query: 406 EKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF--------DAAVKLAVKIKSETQGTK 867 +K+ VFPG+QGGP H I AVA K+A P +K YQ+QV+ N A+TL+ GY++VSGGTENHL+LV++ + + G E L HI NKN VP D S V G+R+GTPA+T+RG+ E+D +A++ DA V AV+ K Q K Sbjct: 250 KKLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPAFKVYQQQVVKNAKAMAETLMLRGYKIVSGGTENHLMLVDMIGRDVSGKDAEGALGQAHITVNKNAVPDDPRSPFVTSGLRLGTPAVTTRGYQEQDCVDLAHWIADVLDAPADATVIAAVREKVAAQCRK 412
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_RHOFD (Serine hydroxymethyltransferase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=glyA PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.940e-31 Identity = 65/130 (50.00%), Postives = 90/130 (69.23%), Query Frame = -1 Query: 484 KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEED 870 ++ IN A+FPGLQGGP H I AVA K+A PE+K YQ+QVL+N A+TL+ G +VSG TE+H++LV+L++K I G E VL + H+ NKN +P D MV G+R+GTPA+T+RGF +E+ Sbjct: 246 EKAINSAIFPGLQGGPLMHVIAAKAVAFKEALQPEFKVYQQQVLTNARVVAETLVSRGLRIVSGRTESHVMLVDLRSKSITGKEAEAVLGSAHMTINKNAIPNDPEKPMVTSGVRIGTPAMTTRGFKDEE 375
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_POLSJ (Serine hydroxymethyltransferase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=glyA PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.940e-31 Identity = 66/130 (50.77%), Postives = 90/130 (69.23%), Query Frame = -1 Query: 484 KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEED 870 ++ IN A+FPGLQGGP H I AVA K+A +PE+K YQ+QVL+N A+TL + G +VSG TE+HL+LV+L+ K I G E VL + H+ NKN +P D MV G+R+GTPA+T+RGF +E+ Sbjct: 246 EKAINSAIFPGLQGGPLMHVIAAKAVAFKEALSPEFKTYQQQVLTNARIVAETLTQRGLRIVSGRTESHLMLVDLRAKGITGKEAEAVLGSAHMTINKNAIPNDPEKPMVTSGVRIGTPAMTTRGFKDEE 375
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYC_ENCCU (Serine hydroxymethyltransferase, cytosolic OS=Encephalitozoon cuniculi GN=SHMT-1 PE=3 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 6.452e-31 Identity = 74/189 (39.15%), Postives = 112/189 (59.26%), Query Frame = -1 Query: 310 KINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLK--DFVATTQSANF--QSEIAKLRHDVEEYAKQFP 864 +IN AVFP LQGGPHNHTI G+A AL A TPE+ Y +V+ N + L +G ++++GGT+NH++LV+L++ +DG+ VE + +A+ I+ N+N + G+ S + P GIR+GT A+T+RGF E+ +V VKL + T G K+ D T A ++ LR V A+ +P Sbjct: 272 RINFAVFPMLQGGPHNHTIAGIASALLHAGTPEFAEYTRRVVENSRELCSRLQSLGLDILTGGTDNHMLLVDLRSTGVDGAAVEHMCDALGISLNRNAIVGNSSPLSPSGIRVGTYAVTARGFGPEEMREVGDIIGGVVKLC---REMTGGRKMSKADLHRVTSDARVMGSEQVLVLRRRVCALAEAYP 457
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_XYLFM (Serine hydroxymethyltransferase OS=Xylella fastidiosa (strain M12) GN=glyA PE=3 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 6.452e-31 Identity = 72/163 (44.17%), Postives = 98/163 (60.12%), Query Frame = -1 Query: 406 EKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF--------DAAVKLAVKIKSETQGTK 867 +K+ VFPG+QGGP H I AVA K+A P +K YQ+QV+ N A+TL+ GY++VSGGTENHL+LV++ + + G E L HI NKN VP D S V G+R+GTPA+T+RG+ E+D +A++ DA V AV+ K Q K Sbjct: 250 KKLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPAFKVYQQQVVKNAKAMAETLMLRGYKIVSGGTENHLMLVDMIGRDVSGRDAEGALGQAHITVNKNAVPDDPRSPFVTSGLRLGTPAVTTRGYQEQDCVDLAHWIADVLDAPADATVIAAVREKVAAQCKK 412
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_VARPS (Serine hydroxymethyltransferase OS=Variovorax paradoxus (strain S110) GN=glyA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.426e-31 Identity = 66/130 (50.77%), Postives = 89/130 (68.46%), Query Frame = -1 Query: 484 KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEED 870 ++ IN A+FPGLQGGP H I AVA K+A +PE+KAYQ+QV+ N A TL E G +VSG TE+H++LV+L+ K I G E VL + H+ NKN +P D MV G+R+GTPA+T+RGF +E+ Sbjct: 246 EKAINSAIFPGLQGGPLMHVIAAKAVAFKEAMSPEFKAYQQQVVKNAQIVADTLTERGLRIVSGRTESHVMLVDLRAKGITGKEAEAVLGSAHMTINKNAIPNDPEKPMVTSGVRIGTPAMTTRGFRDEE 375
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_SERP5 (Serine hydroxymethyltransferase OS=Serratia proteamaculans (strain 568) GN=glyA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.426e-31 Identity = 67/134 (50.00%), Postives = 88/134 (65.67%), Query Frame = -1 Query: 469 EKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 867 +K+N AVFPG QGGP H I G AVALK+A PE+K YQ+QV N + +LE GY++VSGGT NHL L++L +K + G + L +I NKN+VP D S V G+R+GTPA+T RGF E D ++A Sbjct: 250 KKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKIYQQQVAKNAKAMVEVVLERGYKVVSGGTHNHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGVRIGTPAVTRRGFKEADVRELA 383
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_SALRD (Serine hydroxymethyltransferase OS=Salinibacter ruber (strain DSM 13855) GN=glyA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.426e-31 Identity = 68/142 (47.89%), Postives = 89/142 (62.68%), Query Frame = -1 Query: 445 EKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVP-GDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 867 E ++ AVFPG QGGP H I AV K+A P + Y +QV+ N L E GY+LVS GT+NHLVL++L+NK + G E+ LEA I ANKN VP D S V G+R+GTPA+T+RGF ++FA VA D ++ Sbjct: 261 ELLDSAVFPGTQGGPLMHVIAAKAVGFKEALKPSFAEYTQQVVDNAQAMGAELRERGYDLVSDGTDNHLVLIDLRNKGLTGKEAEQALEAAGITANKNMVPFDDKSPFVTSGLRLGTPAMTTRGFGPDEFAHVAEMIDRVLQ 402 The following BLAST results are available for this feature:
BLAST of CX671782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671782 ID=CX671782; Name=CX671782; organism=Citrus sinensis; type=EST; length=894bpback to top |