CX671782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYC_CAEEL (Serine hydroxymethyltransferase OS=Caenorhabditis elegans GN=mel-32 PE=1 SV=2) HSP 1 Score: 204.527 bits (519), Expect = 6.630e-52 Identity = 105/201 (52.24%), Postives = 139/201 (69.15%), Query Frame = -1 Query: 295 GKEVFYD*KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSAN-FQSEIAKLRHDVEEYAKQFPTIGFE 894 G + YD +EKIN AVFPGLQGGPHNHTI G+AVAL+Q + ++ Y EQVL N A+ + + GY L +GGT+NHL+LV+L+ ++G+R E VL+ HIA NKNT PGDVSA+ PGGIR+GTPALTSRGF E+DF KV F V++A K +E G LKDF + T++ F+ ++A L VEE++ +F G E Sbjct: 306 GVDTLYDLEEKINSAVFPGLQGGPHNHTIAGIAVALRQCLSEDFVQYGEQVLKNAKTLAERMKKHGYALATGGTDNHLLLVDLRPIGVEGARAEHVLDLAHIACNKNTCPGDVSALRPGGIRLGTPALTSRGFQEQDFEKVGDFIHEGVQIAKKYNAEA-GKTLKDFKSFTETNEPFKKDVADLAKRVEEFSTKFEIPGNE 505
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYM_RABIT (Serine hydroxymethyltransferase, mitochondrial OS=Oryctolagus cuniculus GN=SHMT2 PE=1 SV=2) HSP 1 Score: 203.756 bits (517), Expect = 1.131e-51 Identity = 105/200 (52.50%), Postives = 137/200 (68.50%), Query Frame = -1 Query: 298 GKEVFYD*KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVA-TTQSANFQSEIAKLRHDVEEYAKQFPTIGF 894 G+E+ Y +++IN AVFP LQGGPHNH I +AVALKQA TP ++ Y QVL N A LLE GY LVSGGT+NHLVLV+L+ K +DG+R E+VLE V I ANKNT PGD SA+ PGG+R+G PALTSR F E+DF +V F D V + +++K +T KL+DF + + +A LR V+++A+ FP GF Sbjct: 304 GQEIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKRKT--AKLQDFKSFLLKDPETSQHLADLRRRVQQFARAFPMPGF 501
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYC_SCHPO (Probable serine hydroxymethyltransferase, cytosolic OS=Schizosaccharomyces pombe GN=shm2 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 3.290e-51 Identity = 104/197 (52.79%), Postives = 137/197 (69.54%), Query Frame = -1 Query: 313 GKEVFYD*KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKS---ETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQF 894 G + Y+ ++KIN +VFPG QGGPHNHTIT LAVAL QA TPE+ YQ+ VLSN A + GY+LVSGGT+ HLVLV+L +K +DG+RVE++LE V+I+ANKNTVPGD SA++P G+R+GTPA T+RGF E+DF +V D V L KI + +K +DF A + SEIAKL+ +V +A +F Sbjct: 272 GNPILYELEDKINFSVFPGHQGGPHNHTITALAVALGQAKTPEFYQYQKDVLSNAKAMANAFITRGYKLVSGGTDTHLVLVDLTDKGVDGARVERILELVNISANKNTVPGDKSALIPRGLRLGTPACTTRGFDEKDFERVVELIDEVVSLTKKINEAALKEGKSKFRDFKAYVGDGSKFSEIAKLKKEVITWAGKF 468
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYC_CANAL (Serine hydroxymethyltransferase, cytosolic OS=Candida albicans GN=SHM2 PE=1 SV=3) HSP 1 Score: 200.29 bits (508), Expect = 1.250e-50 Identity = 99/197 (50.25%), Postives = 136/197 (69.04%), Query Frame = -1 Query: 310 GKEVFYD*KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSE--TQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFP 894 G+E+ YD + IN +VFPG QGGPHNHTI LA ALKQA TPE+K YQEQVL N + GY+LVS GT++H+VLV+LK+K+IDG+RVE V E ++IA NKN++PGD SA+VPGG+R+G PA+T+RG EEDF K+ + D AV A +++S+ KLKDF + ++ +R ++ ++A FP Sbjct: 273 GQEILYDLENPINFSVFPGHQGGPHNHTIAALATALKQANTPEFKEYQEQVLKNAKALESEFTKKGYKLVSDGTDSHMVLVSLKDKQIDGARVETVCEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGLGEEDFKKIVSYIDFAVNYAKEVQSQLPKDANKLKDFKNAVSGDS--EKLKAVRDEIYQWAGSFP 467
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYM_ASHGO (Serine hydroxymethyltransferase, mitochondrial OS=Ashbya gossypii GN=SHM1 PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 1.058e-49 Identity = 101/204 (49.51%), Postives = 143/204 (70.10%), Query Frame = -1 Query: 301 GKEVFYD*KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQS------EIAKLRHDVEEYAKQFPTIG 894 G E+ YD ++IN +VFP QGGPHNHTI+ LAVALKQA TPE+K YQ V+ N F + L + G+ LVSGGT+ HL+L++L IDGSR+E +LE ++IAANKNT+PGD SA+ P G+R+GTPA+T+RGF +F +VA + + AVKLA+ +KS+ + KD A T+ A+F+S ++ KL ++V ++ Q+P G Sbjct: 295 GTEIMYDLDKRINFSVFPAHQGGPHNHTISALAVALKQAATPEFKNYQTAVVENAKVFGEELSKRGFSLVSGGTDTHLLLIDLSPMGIDGSRLETILERLNIAANKNTIPGDKSALYPSGLRVGTPAMTTRGFGPAEFGRVAAYINEAVKLAIGLKSQ-EPVDAKD--AKTRLAHFKSFCAESEQVTKLANEVADWVAQYPVPG 495
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYC_CANGA (Serine hydroxymethyltransferase, cytosolic OS=Candida glabrata GN=SHM2 PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.382e-49 Identity = 97/197 (49.24%), Postives = 133/197 (67.51%), Query Frame = -1 Query: 310 GKEVFYD*KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSE--TQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFP 894 GKE+ YD + IN +VFPG QGGPHNHTI LA ALKQA TPE+K YQ QVL N +GY LVS GT++H+VLV+L+ K +DG+RVE V E ++IA NKN++PGD SA+VPGG+R+G PA+T+RG EEDF ++ + D AVK A + +S + KLKDF A ++A L+ ++ ++ ++P Sbjct: 272 GKEIPYDLENPINFSVFPGHQGGPHNHTIAALATALKQAATPEFKEYQTQVLKNAKALENEFQTLGYRLVSNGTDSHMVLVSLREKGVDGARVEYVCEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGMGEEDFHRIVRYIDQAVKFAEQTQSSLPKEANKLKDFKAKVD--EIADQLAPLKKEIYDWTAEYP 466
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYD_SCHPO (Probable serine hydroxymethyltransferase, cytosolic OS=Schizosaccharomyces pombe GN=SPAC24C9.12c PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.806e-49 Identity = 96/197 (48.73%), Postives = 131/197 (66.50%), Query Frame = -1 Query: 310 GKEVFYD*KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSE--TQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFP 894 G ++YD ++KIN +VFPG QGGPHNHTIT LAVALKQ P YK YQ QV+ N + + GY+L + GT++H+VLV++K+K +DG+R E+VLE ++I NKNTVP D SA P GIR+GTPA+T+RGF E+DF +V + D A+ A ++ E KLKDF A E+ +L+ +V E+A FP Sbjct: 266 GNPIYYDLEDKINFSVFPGHQGGPHNHTITALAVALKQCQEPAYKEYQAQVVKNAKVCEEEFKKRGYKLAADGTDSHMVLVDVKSKGVDGARAERVLELINIVTNKNTVPSDKSAFSPSGIRVGTPAMTTRGFKEQDFVRVVDYIDRALTFAANLQKELPKDANKLKDFKAKLGEGEQYPELVQLQKEVAEWASSFP 462
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYC_ASHGO (Serine hydroxymethyltransferase, cytosolic OS=Ashbya gossypii GN=SHM2 PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 3.080e-49 Identity = 96/197 (48.73%), Postives = 137/197 (69.54%), Query Frame = -1 Query: 310 GKEVFYD*KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSE--TQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFP 894 G+EV YD + IN +VFPG QGGPHNHTI+ LA ALKQATTPE++ YQE VL N ++ Y LVS GT++H+VLV+L+ K +DG+RVE V E ++IA NKN++PGD SA+VPGG+R+G PA+T+RG EEDFA++ + + AV++A I+ + +LKDF A + EIA+L ++ + +++P Sbjct: 272 GEEVMYDLEGPINFSVFPGHQGGPHNHTISALATALKQATTPEFREYQELVLKNAKVLETEFKKLNYRLVSDGTDSHMVLVSLREKGVDGARVEHVCEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGMGEEDFARIVGYINRAVEIARSIQQSLPKEANRLKDFKAKVEGGT--DEIAQLAQEIYSWTEEYP 466
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYC_YEAST (Serine hydroxymethyltransferase, cytosolic OS=Saccharomyces cerevisiae GN=SHM2 PE=1 SV=2) HSP 1 Score: 189.119 bits (479), Expect = 2.883e-47 Identity = 92/197 (46.70%), Postives = 131/197 (66.50%), Query Frame = -1 Query: 310 GKEVFYD*KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSE--TQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFP 894 GKEV YD + IN +VFPG QGGPHNHTI LA ALKQA TPE+K YQ QVL N +GY LVS GT++H+VLV+L+ K +DG+RVE + E ++IA NKN++PGD SA+VPGG+R+G PA+T+RG EEDF ++ + + AV+ A +++ +LKDF A + + + ++ ++A ++P Sbjct: 272 GKEVLYDLENPINFSVFPGHQGGPHNHTIAALATALKQAATPEFKEYQTQVLKNAKALESEFKNLGYRLVSNGTDSHMVLVSLREKGVDGARVEYICEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGMGEEDFHRIVQYINKAVEFAQQVQQSLPKDACRLKDFKAKVDEGS--DVLNTWKKEIYDWAGEYP 466
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYC1_DICDI (Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum GN=shmt1 PE=1 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.646e-42 Identity = 92/199 (46.23%), Postives = 127/199 (63.82%), Query Frame = -1 Query: 301 GKEVF-YD*KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFPTIG 894 GKE+ YD + KIN AVFP LQGGPH + I G+AVALK+A + E+K Y QV N + L+ GY+LV+ GT+NHL+L +L+ K + G++ EK + +I NKN V GD +A+ PGGIR+G+ ALTSRG E DF K+A F D V ++++I+ G KL DFV N E+ LR +VEE++ +F G Sbjct: 262 GKEIEEYDIESKINFAVFPSLQGGPHENVIAGVAVALKEADSQEFKEYALQVKKNAAAIGNALMNKGYKLVTNGTDNHLILWDLRPKELTGNKFEKAADIANITVNKNAVHGDTNAISPGGIRIGSSALTSRGLKEADFEKIADFLDRIVSISLEIQGRV-GKKLVDFVV---EINKSKELLDLRKEVEEFSSKFTLPG 456 The following BLAST results are available for this feature:
BLAST of CX671782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671782 ID=CX671782; Name=CX671782; organism=Citrus sinensis; type=EST; length=894bpback to top |