CX671782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_PHYAS (Serine hydroxymethyltransferase OS=Phytoplasma australiense GN=glyA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 5.278e-33 Identity = 71/144 (49.31%), Postives = 97/144 (67.36%), Query Frame = -1 Query: 445 EKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLK--NKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 867 ++IN++VFPG+QGGP H I AV+ K+A + E+K YQ+QV+ N FAQT + GY +VS GT+NHL L+NLK N G ++ +LE V+I NKNT+P D M GIR+GTPA+T++GF E DF K+A D A+K Sbjct: 247 QQINRSVFPGIQGGPLMHVIAAKAVSFKEAQSLEFKNYQQQVIKNAQAFAQTFQKKGYHVVSQGTDNHLFLINLKKTNPLFTGEKIANILEKVNIIVNKNTIPFDQEKPMFTSGIRLGTPAMTTKGFQEADFIKLADLIDQAIK 390
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_ANATD (Serine hydroxymethyltransferase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=glyA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 5.278e-33 Identity = 70/132 (53.03%), Postives = 93/132 (70.45%), Query Frame = -1 Query: 469 INQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 861 I++++FPG+QGGP H I AVALK+A T E+K YQ Q+L N + L+E G+ LVSGGT+NHL+LV+L+NK I G EK+L+ +I NKN VP D S M+ GIR+GTPA+T+RGF E D +VA Sbjct: 249 IDKSIFPGIQGGPLEHVIAAKAVALKEAMTEEFKNYQVQILKNAKALSTRLIERGFRLVSGGTDNHLMLVDLRNKGITGKDAEKILDEHNITCNKNAVPFDTQSPMITSGIRLGTPAVTTRGFKEGDMLEVA 380
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_ACIAC (Serine hydroxymethyltransferase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=glyA PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 6.893e-33 Identity = 69/130 (53.08%), Postives = 90/130 (69.23%), Query Frame = -1 Query: 484 KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEED 870 ++ IN A+FPGLQGGP H I AVA K+A TPE+KAYQ+QV N FA+TL+E G ++SG TE+H++LV+L+ K I G E L HI NKN++P D MV GIR+GTPA+T+RGF EE+ Sbjct: 246 EKAINSAIFPGLQGGPLEHVIAAKAVAFKEALTPEFKAYQQQVAKNAKVFAETLIERGLRIISGRTESHVMLVDLRAKGITGKAAEAALGQAHITINKNSIPNDPEKPMVTSGIRVGTPAITTRGFKEEE 375
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA1_RALSO (Serine hydroxymethyltransferase 1 OS=Ralstonia solanacearum GN=glyA1 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 6.893e-33 Identity = 78/188 (41.49%), Postives = 106/188 (56.38%), Query Frame = -1 Query: 310 KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFP 870 ++ IN A+FPG+QGGP H I G AVA K+A +P +KAYQEQV+ N A+TL+ G +VSG TE+H++LV+L+ K I G EKVL HI NKN +P D V GIR+G+PA+T+RGF E + KVA+ + + ++ IA +R V E KQFP Sbjct: 247 EKAINSAIFPGIQGGPLMHVIAGKAVAFKEAQSPTFKAYQEQVVKNARAMAETLMARGLRIVSGRTESHVMLVDLRAKSITGKEAEKVLGDAHITVNKNAIPNDPEKPFVTSGIRLGSPAMTTRGFKEGEAVKVAHL----------------------IADVLDNPHDEANIAAVRAKVAELTKQFP 412
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_SYMTH (Serine hydroxymethyltransferase OS=Symbiobacterium thermophilum GN=glyA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 9.002e-33 Identity = 77/187 (41.18%), Postives = 108/187 (57.75%), Query Frame = -1 Query: 310 EKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFP 867 ++I++AVFPG+QGGP H I AVA KQ + P+Y+AY QV+ N AQ LLE GY LV+GGT+NHL+LV+L+ K I G E +L+ V I NKN +P D MV GIR+GTPA+T+RG E + ++A D A+ N ++E+ ++R +V E +FP Sbjct: 244 KEIDKAVFPGMQGGPLMHIIAAKAVAFKQLSDPDYRAYCGQVVKNAKALAQALLERGYRLVTGGTDNHLMLVDLRPKGITGRDAEHLLDRVSITVNKNAIPNDPEKPMVTSGIRIGTPAMTTRGMKEAEMVQIADLIDRAI----------------------THRNDEAELDRIRAEVHELTARFP 408
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_STRMK (Serine hydroxymethyltransferase OS=Stenotrophomonas maltophilia (strain K279a) GN=glyA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 9.002e-33 Identity = 68/134 (50.75%), Postives = 91/134 (67.91%), Query Frame = -1 Query: 469 EKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 867 +K+ VFPG+QGGP H I G AVA K+A P +KAYQ+QV+ N A TL+E GY++VSGGT+NHL+LV++ K + G E L HI NKN+VP D S V G+R+GTPA+T+RG+VE+D +A Sbjct: 250 KKLQSIVFPGIQGGPLMHVIAGKAVAFKEALEPGFKAYQQQVVKNAQAMANTLIERGYKIVSGGTQNHLMLVDMIGKDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTSGLRLGTPAVTTRGYVEQDCVDLA 383
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBL (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=glyA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.176e-32 Identity = 64/140 (45.71%), Postives = 97/140 (69.29%), Query Frame = -1 Query: 445 INQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 861 +++A+FPG+QGGP HTI AV ++A +YK Y +QV+ N + L G+ L+SGGT+NHL+L++L NK I G EK+L++V I NKNT+P + +S + GIR+GTPA+T+RGF EE+ K+AYF + +++ Sbjct: 248 VDKAIFPGIQGGPLMHTIAAKAVCFREALREDYKEYMQQVVKNTKVLGEELKNYGFRLISGGTDNHLLLIDLTNKNITGKDAEKLLDSVGITVNKNTIPFETLSPFITSGIRIGTPAVTTRGFKEEEMKKIAYFMNYSIE 387
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA1_RALEJ (Serine hydroxymethyltransferase 1 OS=Ralstonia eutropha (strain JMP134) GN=glyA1 PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.176e-32 Identity = 76/191 (39.79%), Postives = 107/191 (56.02%), Query Frame = -1 Query: 301 KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFPTIG 870 ++ IN ++FPG+QGGP H I G AVA K+A TPE+KAYQEQV+ N + A+TL+ G +VSG TE+H++LV+L+ K I G E++L H+ NKN +P D V GIR+G+PA+T+RGF EE+ + G + D + A IA +R V K+FP G Sbjct: 247 EKAINSSIFPGIQGGPLMHVIAGKAVAFKEALTPEFKAYQEQVVKNAAVLAETLIARGLRIVSGRTESHVMLVDLRAKNITGKEAERILGEAHLTVNKNAIPNDPEKPFVTSGIRVGSPAMTTRGFKEEE-------------------ARIVGNLIADVLDNPHDA---GNIASVREQVSALTKRFPVYG 415
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_DESRM (Serine hydroxymethyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=glyA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.536e-32 Identity = 73/150 (48.67%), Postives = 98/150 (65.33%), Query Frame = -1 Query: 415 INQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQ 861 I++A+FPG QGGP H I A A +A PE+KAYQ+Q+++N A+ LLE G+ LVSGGT+NHL+LV+L+ I G + E +L+ VHI NKN +P D V GIR+GTPA+T+RGF E+D KVA A+ L K +TQ Sbjct: 248 IDKAIFPGSQGGPLMHVIAAKAAAFGEALKPEFKAYQQQIINNAQALAKGLLERGFNLVSGGTDNHLILVDLRGTGITGKQAETLLDEVHITCNKNAIPFDPEKPFVTSGIRLGTPAVTTRGFKEKDMDKVAEII--ALTLQEKDNPDTQ 395
BLAST of CX671782 vs. ExPASy Swiss-Prot
Match: GLYA_POLSQ (Serine hydroxymethyltransferase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=glyA PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.006e-32 Identity = 77/191 (40.31%), Postives = 105/191 (54.97%), Query Frame = -1 Query: 301 KEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFPTIG 870 ++ IN AVFPGLQGGP H I G A A K+A P +K YQ+QV++N A+TL+ G +VSGGT++H++LV+L+ K++ G E VL HI NKN +P D MV GIR+G+PA+T+RGF E + +V F + N IAK+R V E K+FP G Sbjct: 246 EKAINSAVFPGLQGGPLMHVIAGKAAAFKEAAEPGFKDYQKQVVANAKALAETLIARGLRIVSGGTDSHVMLVDLRAKKMTGKEAEHVLGEAHITCNKNGIPNDPEKPMVTSGIRLGSPAMTTRGFKEAEAVQVGNF----------------------IADVLDNPNDPENIAKVRAQVAELTKRFPVYG 414 The following BLAST results are available for this feature:
BLAST of CX671782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671782 ID=CX671782; Name=CX671782; organism=Citrus sinensis; type=EST; length=894bpback to top |