CX671778

Overview
NameCX671778
Unique NameCX671778
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671778 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.109e-11
Identity = 35/112 (31.25%), Postives = 60/112 (53.57%), Query Frame = -2
Query:  290 LDLSCNKLIGHIPPQIGNLTRIQTLNLSHNNLTGSIPSTFSNLKHVESLDLSNNKLNGKIPHQLVELKTLEVFSVAYNNLSGEIPEWKAQFATFNESSYEGNTFLCGLPLPI 625
            L ++ N+L G  PPQ+G +T +  + +  N  TG +P    NL+ ++ L +S+N + G+IP  L  LK L  F +  N+LSG+IP++   +        +G +    +P  I
Sbjct:  140 LAVTGNRLSGPFPPQLGQITTLTDVIMESNLFTGQLPPNLGNLRSLKRLLISSNNITGRIPESLSNLKNLTNFRIDGNSLSGKIPDFIGNWTRLVRLDLQGTSMEGPIPASI 251          
BLAST of CX671778 vs. ExPASy Swiss-Prot
Match: TMM_ARATH (Protein TOO MANY MOUTHS OS=Arabidopsis thaliana GN=TMM PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.109e-11
Identity = 39/96 (40.62%), Postives = 57/96 (59.38%), Query Frame = -2
Query:  371 YQGKVLSLLSGLDLSCNKLIGHIPPQIGNLTRIQTLNLSHNNLTGSIPSTFSNLKHVESLDLSNNKLNGKIPHQLVELKTLEVFSVAYNNLSGEIP 658
            + G++ S L  L L  N  +G IP ++GNLT ++ L+L  N+L GSIP +F+    + SLDLS N+L G IP  +  L  L V  +  N L+G +P
Sbjct:  153 FLGRLGSSLQTLVLRENGFLGPIPDELGNLTNLKVLDLHKNHLNGSIPLSFNRFSGLRSLDLSGNRLTGSIPGFV--LPALSVLDLNQNLLTGPVP 246          
BLAST of CX671778 vs. ExPASy Swiss-Prot
Match: Y4374_ARATH (Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.304e-11
Identity = 38/92 (41.30%), Postives = 52/92 (56.52%), Query Frame = -2
Query:  368 LSLLSGLDLSCNKLIGHIPPQIGNLTRIQTLNLSHNNLTGSIPSTFSNLKHVESLDLSNNKLNGKIPHQLVELKTLEVFSVAYNNLSGEIPE 643
            LS L  L L  N + G  P     L  +  L L  NNL+G +P  FS  K++ S++LSNN  NG IP  L  LK ++  ++A N LSG+IP+
Sbjct:   92 LSALRVLSLRSNLISGEFPKDFVELKDLAFLYLQDNNLSGPLPLDFSVWKNLTSVNLSNNGFNGTIPSSLSRLKRIQSLNLANNTLSGDIPD 183          
BLAST of CX671778 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.304e-11
Identity = 49/133 (36.84%), Postives = 70/133 (52.63%), Query Frame = -2
Query:  263 KVLSLLSGLDLSCNKLIGHIPPQIGNLTRIQTLNLSHNNLTGSIPSTFSNLKHVESLDLSNNKLNGKIPHQLVELKTLEVFSVAYNNLSGE--IPEWKAQFATFN--ESSYEGNTFLCGLPLPICRSPATMPE 649
            K L  +  L L   K+IG IP  IG+L +++TL+LS N L+G IPS+F N+K  + + L+ NKL G +P+  VE    +   V++NN + E  IP       T N  ES   GN    G    + R P   P+
Sbjct:  278 KNLESIKTLILRKCKIIGPIPKYIGDLKKLKTLDLSFNLLSGEIPSSFENMKKADFIYLTGNKLTGGVPNYFVERN--KNVDVSFNNFTDESSIPSHDCNRVTSNLVESFALGNKSHKGSTCFLQRMPCVHPK 408          
BLAST of CX671778 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.304e-11
Identity = 33/68 (48.53%), Postives = 48/68 (70.59%), Query Frame = -2
Query:  422 LDLSCNKLIGHIPPQIGNLTRIQTLNLSHNNLTGSIPSTFSNLKHVESLDLSNNKLNGKIPHQLVELK 625
            LDLS + L G IPP I NLT++Q L+LS NNLTG +P   + +K++  ++LS NKL+G +P  L++ K
Sbjct:  415 LDLSSSGLNGVIPPSIQNLTQLQELDLSQNNLTGKVPEFLAKMKYLLVINLSGNKLSGLVPQALLDRK 482          
BLAST of CX671778 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.304e-11
Identity = 36/102 (35.29%), Postives = 58/102 (56.86%), Query Frame = -2
Query:  329 LSGLDLSCNKLIGHIPPQIGNLTRIQTLNLSHNNLTGSIPSTFSNLKHVESLDLSNNKLNGKIPHQLVELKTLEVFSVAYNNLSGEIPEWKAQFATFNESSY 634
            +S L L    L G++ P++G L+R+  L+   N +TGSIP    N+K +E L L+ N LNG +P +L  L  L+   +  N +SG +P+    FA  N++ +
Sbjct:   85 VSELQLFSMNLSGNLSPELGRLSRLTILSFMWNKITGSIPKEIGNIKSLELLLLNGNLLNGNLPEELGFLPNLDRIQIDENRISGPLPK---SFANLNKTKH 183          
BLAST of CX671778 vs. ExPASy Swiss-Prot
Match: RPKL_ARATH (Receptor protein kinase-like protein At4g34220 OS=Arabidopsis thaliana GN=At4g34220 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.304e-11
Identity = 33/85 (38.82%), Postives = 54/85 (63.53%), Query Frame = -2
Query:  371 LDLSCNKLIGHIPPQIGNLTRIQTLNLSHNNLTGSIPSTFSNLKHVESLDLSNNKLNGKIPHQLVELKTLEVFSVAYNNLSGEIP 625
            LDLS N   G +P  + N T +Q+++L  NNL+G +P + +++ +++ L+LS N   G+IP  +  LK L V S++ N  SG+IP
Sbjct:  108 LDLSSNFFNGSLPDSVFNATELQSISLGSNNLSGDLPKSVNSVTNLQLLNLSANAFTGEIPLNISLLKNLTVVSLSKNTFSGDIP 192          
BLAST of CX671778 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.304e-11
Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = -2
Query:  368 LSCNKLIGHIPPQIGNLTRIQTLNLSHNNLTGSIPSTFSNLKHVESLDLSNNKLNGKIPHQLVELKTLEVFSVAYNNLSGEIPE 619
            L+CN L    PP +       +LNLS ++LTG I     NL H++ LDLSNN L G IP  L ++K+L V +++ NN +G IP+
Sbjct:  403 LNCNNLDNSTPPIV------TSLNLSSSHLTGIIAQGIQNLTHLQELDLSNNNLTGGIPEFLADIKSLLVINLSGNNFNGSIPQ 480          
BLAST of CX671778 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.304e-11
Identity = 36/86 (41.86%), Postives = 53/86 (61.63%), Query Frame = -2
Query:  308 RIQTLNLSHNNLTGSIPSTFSNLKHVESLDLSNNKLNGKIPHQLVELKTLEVFSVAYNNLSGEIPEWKAQFATFNESSYEGNTFLC 565
            R+ +LNLS + LTG I +   NL H+E LDLSNN L G +P  L ++K+L + +++ NNLSG +P+   +     E   +GN  LC
Sbjct:  412 RVLSLNLSSSGLTGIIAAAIQNLTHLEKLDLSNNTLTGVVPEFLAQMKSLVIINLSGNNLSGPLPQGLRREGL--ELLVQGNPRLC 495          
BLAST of CX671778 vs. ExPASy Swiss-Prot
Match: Y3288_ARATH (Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana GN=At3g02880 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.927e-11
Identity = 54/184 (29.35%), Postives = 75/184 (40.76%), Query Frame = -2
Query:  149 LSLLSGLDLSCNKLIGHIPPQIGNLTRIQTLNLSHNNLTGSIPSTFSNLKHVESLDLSNNKLNGKIPHQLVELKTLEVFSVAYNNLSGEIPEWKAQFATFNESS------------------YEGNTFLCGLPLPICRSPATMPEASIGNEQDDNLIDMDSFFITFTTSYVI-VIFGIVIVLYV 643
            L+ L  L L  N L G IP    NL  ++ L L  N  +G IPS    L  +  ++L  NK +G+IP  +     L    +  N LSG IPE       FN SS                  +EGNT LCG PL  C + +     + G        D D          VI  + G++++L +
Sbjct:   89 LTQLKTLSLRFNSLSGPIPSDFSNLVLLRYLYLQGNAFSGEIPSLLFTLPSIIRINLGENKFSGRIPDNVNSATRLVTLYLERNQLSGPIPEITLPLQQFNVSSNQLNGSIPSSLSSWPRTAFEGNT-LCGKPLDTCEAESPNGGDAGGPNTPPEKKDSDKLSAGAIVGIVIGCVVGLLLLLLI 271          
The following BLAST results are available for this feature:
BLAST of CX671778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
Y5344_ARATH3.109e-1131.25Probable LRR receptor-like serine/threonine-protei... [more]
TMM_ARATH3.109e-1140.63Protein TOO MANY MOUTHS OS=Arabidopsis thaliana GN... [more]
Y4374_ARATH5.304e-1141.30Probable inactive receptor kinase At4g23740 OS=Ara... [more]
Y1765_ARATH5.304e-1136.84Probable LRR receptor-like serine/threonine-protei... [more]
Y1755_ARATH5.304e-1148.53Probable LRR receptor-like serine/threonine-protei... [more]
Y1684_ARATH5.304e-1135.29Probable LRR receptor-like serine/threonine-protei... [more]
RPKL_ARATH5.304e-1138.82Receptor protein kinase-like protein At4g34220 OS=... [more]
RLK6_ARATH5.304e-1142.86Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
PAM74_ARATH5.304e-1141.86Probable LRR receptor-like serine/threonine-protei... [more]
Y3288_ARATH6.927e-1129.35Probable inactive receptor kinase At3g02880 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13B03_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13B03-C5-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671778 ID=CX671778; Name=CX671778; organism=Citrus sinensis; type=EST; length=860bp
TTTTTTAGAACTTAAAGAATCGTAATTAAACTGCTAATTAATTTCAATGA
CAATATCTTGTTGCAATAAGATTGTTTACAACAAAATAGTAACATTAAGT
TATCCACATTTCAACAAAGTAAAACCATCTACGTCGCCAATAAGAATTTA
CATATAAAACAATAACAATTCCGAATATCACAATTACGTACGATGTTGTA
AATGTGATAAAGAAACTGTCCATATCAATTAAATTATCATCTTGTTCATT
GCCAATTGAAGCCTCCGGCATAGTTGCTGGTGATCTGCAAATGGGCAATG
GCAGTCCACAAAGAAAAGTATTTCCCTCATAGCTACTCTCGTTGAAGGTT
GCAAATTGTGCTTTCCATTCTGGAATTTCGCCTGATAAGTTATTGTATGC
CACACTGAAAACCTCCAATGTCTTTAACTCCACTAGTTGATGAGGGATTT
TCCCATTCAATTTGTTGTTGGAAAGATCCAAACTTTCGACATGCTTCAAG
TTTGAAAATGTTGATGGGATCGATCCTGTCAAGTTATTGTGCGAGAGATT
CAATGTTTGAATCCTTGTCAAATTTCCAATTTGAGGAGGAATATGACCAA
TTAGCTTGTTGCAAGAAAGATCAAGTCCTGATAGGAGGCTAAGCACTTTT
CCTTGGTAAATGTACGCAATGTTCTTTGTTGTGAACTCAAAAATTTCATG
GTTTTGCTTTTCTAAAAATCCCTGATGGCCTTCGATGGAAAAAAATATTT
CAAATTGCTCATCAGGACTAGAACTATTGCTGTAACTTTCATGAAGTGTG
GTGTTATCAAAGCAAGGAGGAATAGGACCGTGAAGATTATTATTAGAAAG
ATCTAACAAT
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