CX671771

Overview
NameCX671771
Unique NameCX671771
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_CLOPE (10 kDa chaperonin OS=Clostridium perfringens GN=groS PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.649e-20
Identity = 48/93 (51.61%), Postives = 65/93 (69.89%), Query Frame = 1
Query:  262 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 540
            SIKPLGDRV++K    EE T  GI +  TA+ +PQ  EVVAVG G  V   + ++ VK G +V+YSKYAGTE++F G  + ILR+DD++ I+E
Sbjct:    2 SIKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAIVDGKRTEMEVKIGDKVLYSKYAGTEVKFEGEEYTILRQDDILAIVE 94          

HSP 2 Score: 72.7886 bits (177), Expect = 2.542e-12
Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFK 780
            +KPL DRV IK  EAEETT  G+++T  +KE+P    V+AVGPG +  +G R  + +  G+ V+YSKYAG + K
Sbjct:    3 IKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAI-VDGKRTEMEVKIGDKVLYSKYAGTEVK 75          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_CLOP1 (10 kDa chaperonin OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=groS PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.649e-20
Identity = 48/93 (51.61%), Postives = 65/93 (69.89%), Query Frame = 1
Query:  262 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 540
            SIKPLGDRV++K    EE T  GI +  TA+ +PQ  EVVAVG G  V   + ++ VK G +V+YSKYAGTE++F G  + ILR+DD++ I+E
Sbjct:    2 SIKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAIVDGKRTEMEVKIGDKVLYSKYAGTEVKFEGEEYTILRQDDILAIVE 94          

HSP 2 Score: 72.7886 bits (177), Expect = 2.542e-12
Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFK 780
            +KPL DRV IK  EAEETT  G+++T  +KE+P    V+AVGPG +  +G R  + +  G+ V+YSKYAG + K
Sbjct:    3 IKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAI-VDGKRTEMEVKIGDKVLYSKYAGTEVK 75          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_CHLL2 (10 kDa chaperonin OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=groS PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.649e-20
Identity = 48/94 (51.06%), Postives = 65/94 (69.15%), Query Frame = 1
Query:  262 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 540
            ++KPL DRV+VK    EEKT GG+F+P T + KPQ GEVVAVG GK     + LD+ V  G +V+Y KY+GTE+   G ++LI+RE D+  IL+
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLFIPDTGKEKPQYGEVVAVGPGKVADNGQLLDMQVTVGKKVLYGKYSGTEVNVEGEDYLIMRESDIFAILD 95          

HSP 2 Score: 74.7146 bits (182), Expect = 6.689e-13
Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 1
Query:  556 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            +LKPL DRV +K A AEE T GGL + +  KEKP  G V+AVGPG + + G    + +  G  V+Y KY+G +    +G +Y+
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLFIPDTGKEKPQYGEVVAVGPGKVADNGQLLDMQVTVGKKVLYGKYSGTEV-NVEGEDYL 83          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_PELPB (10 kDa chaperonin OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=groS PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.378e-20
Identity = 47/93 (50.54%), Postives = 66/93 (70.97%), Query Frame = 1
Query:  262 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 537
            ++KPL DRV+VK    EEKT GG+++P T + KPQ GEVVAVG GK     + L++ VK G++V+Y KY+GTE+   G ++LI+RE D+  IL
Sbjct:    2 NLKPLSDRVIVKPAAAEEKTKGGLYIPDTGKEKPQYGEVVAVGAGKIADNGQLLEMQVKVGSKVLYGKYSGTEVSVEGEDYLIMRESDIFAIL 94          

HSP 2 Score: 72.7886 bits (177), Expect = 2.542e-12
Identity = 35/83 (42.17%), Postives = 52/83 (62.65%), Query Frame = 1
Query:  556 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            +LKPL+DRV +K A AEE T GGL + +  KEKP  G V+AVG G + + G    + +  G+ V+Y KY+G +    +G +Y+
Sbjct:    2 NLKPLSDRVIVKPAAAEEKTKGGLYIPDTGKEKPQYGEVVAVGAGKIADNGQLLEMQVKVGSKVLYGKYSGTEV-SVEGEDYL 83          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_MYXXD (10 kDa chaperonin OS=Myxococcus xanthus (strain DK 1622) GN=groS PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.378e-20
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 540
            I+PL DR++VK    E KT GG+F+P TA+ KP  G+V+AVG GK     K+  + +K G  +++SKYAGTE++ +G  HLILRE+DV+G++E
Sbjct:    3 IRPLQDRLIVKRVAEENKTKGGLFIPDTAKEKPLEGKVIAVGNGKVQEDGKVRPLDIKAGDTILFSKYAGTEIKLDGEEHLILREEDVLGVIE 95          

HSP 2 Score: 75.485 bits (184), Expect = 3.921e-13
Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            ++PL DR+ +K    E  T GGL + + +KEKP  G VIAVG G + E+G  +PL I  G+T+++SKYAG + K  DG  ++
Sbjct:    3 IRPLQDRLIVKRVAEENKTKGGLFIPDTAKEKPLEGKVIAVGNGKVQEDGKVRPLDIKAGDTILFSKYAGTEIK-LDGEEHL 83          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_CLOPS (10 kDa chaperonin OS=Clostridium perfringens (strain SM101 / Type A) GN=groS PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.378e-20
Identity = 47/93 (50.54%), Postives = 65/93 (69.89%), Query Frame = 1
Query:  262 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 540
            SIKPLGDRV++K    EE T  GI +  TA+ +PQ  EVVAVG G  +   + ++ VK G +V+YSKYAGTE++F G  + ILR+DD++ I+E
Sbjct:    2 SIKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAIIDGKRTEMEVKIGDKVLYSKYAGTEVKFEGEEYTILRQDDILAIVE 94          

HSP 2 Score: 72.4034 bits (176), Expect = 3.320e-12
Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFK 780
            +KPL DRV IK  EAEETT  G+++T  +KE+P    V+AVGPG +  +G R  + +  G+ V+YSKYAG + K
Sbjct:    3 IKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAI-IDGKRTEMEVKIGDKVLYSKYAGTEVK 75          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_BACHD (10 kDa chaperonin OS=Bacillus halodurans GN=groS PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 7.378e-20
Identity = 49/92 (53.26%), Postives = 66/92 (71.74%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 537
            +KPLGDRV+++    EEKT  GI LP TA+ KPQ G VVAVG G+ T    K+ + VK G  VI+SKYAGTE++++G  +LILRE D++ I+
Sbjct:    2 LKPLGDRVVIEQVETEEKTASGIVLPDTAKEKPQEGRVVAVGTGRVTENGEKIALEVKEGDSVIFSKYAGTEVKYDGKEYLILRESDILAII 93          

HSP 2 Score: 77.7962 bits (190), Expect = 7.901e-14
Identity = 39/82 (47.56%), Postives = 54/82 (65.85%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            LKPL DRV I+  E EE TA G++L + +KEKP  G V+AVG G + E G +  L +  G++V++SKYAG + K  DG  Y+
Sbjct:    2 LKPLGDRVVIEQVETEEKTASGIVLPDTAKEKPQEGRVVAVGTGRVTENGEKIALEVKEGDSVIFSKYAGTEVK-YDGKEYL 82          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_GEOSL (10 kDa chaperonin OS=Geobacter sulfurreducens GN=groS PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.636e-20
Identity = 46/94 (48.94%), Postives = 67/94 (71.28%), Query Frame = 1
Query:  262 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 540
            +++PL DR+LVK    E KT GGIF+P TA+ KPQ GE+VAVG GK     K + + +K G +V++ KYAGT+++  G   LI+REDD++G++E
Sbjct:    2 NLRPLQDRILVKRIEEETKTAGGIFIPDTAKEKPQRGEIVAVGNGKKTEDGKVIPVDLKVGDKVLFGKYAGTDIKIEGQEFLIMREDDILGVIE 95          

HSP 2 Score: 71.633 bits (174), Expect = 5.663e-12
Identity = 32/75 (42.67%), Postives = 48/75 (64.00%), Query Frame = 1
Query:  556 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFK 780
            +L+PL DR+ +K  E E  TAGG+ + + +KEKP  G ++AVG G   E+G   P+ +  G+ V++ KYAG D K
Sbjct:    2 NLRPLQDRILVKRIEEETKTAGGIFIPDTAKEKPQRGEIVAVGNGKKTEDGKVIPVDLKVGDKVLFGKYAGTDIK 76          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_GEOSF (10 kDa chaperonin OS=Geobacter sp. (strain FRC-32) GN=groS PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.636e-20
Identity = 46/93 (49.46%), Postives = 68/93 (73.12%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 540
            ++P+ DR++VK    E KT GGI++P TA+ KPQ GEVVAVG GK     K L + VK G +V++ KY+GTE++  G ++LI+REDD++G++E
Sbjct:    3 LRPMQDRIIVKRVEEETKTAGGIYIPETAKEKPQEGEVVAVGNGKRTEDGKILPLDVKVGDKVLFGKYSGTEVKVEGQDYLIMREDDILGVIE 95          

HSP 2 Score: 72.0182 bits (175), Expect = 4.336e-12
Identity = 34/82 (41.46%), Postives = 52/82 (63.41%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            L+P+ DR+ +K  E E  TAGG+ + E +KEKP  G V+AVG G   E+G   PL +  G+ V++ KY+G + K  +G +Y+
Sbjct:    3 LRPMQDRIIVKRVEEETKTAGGIYIPETAKEKPQEGEVVAVGNGKRTEDGKILPLDVKVGDKVLFGKYSGTEVK-VEGQDYL 83          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_CYAA5 (10 kDa chaperonin OS=Cyanothece sp. (strain ATCC 51142) GN=groS PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.636e-20
Identity = 46/91 (50.55%), Postives = 67/91 (73.63%), Query Frame = 1
Query:  259 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVV 528
            +++KPLGDR+ VK+   EEKT GGI LP  AQ KPQ GEVVAVG GK     ++ ++ VK G +V+YSKYAGT+++ +G ++++L E D++
Sbjct:    9 STVKPLGDRIFVKVSPAEEKTAGGILLPDNAQEKPQIGEVVAVGPGKRNDDGSRSELDVKVGDKVLYSKYAGTDVKLSGEDYVLLSEKDIL 99          

HSP 2 Score: 93.2041 bits (230), Expect = 1.817e-18
Identity = 44/85 (51.76%), Postives = 63/85 (74.12%), Query Frame = 1
Query:  550 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            +  +KPL DR+F+KV+ AEE TAGG+LL + ++EKP IG V+AVGPG  +++G+R  L +  G+ V+YSKYAG D K S G +Y+
Sbjct:    8 VSTVKPLGDRIFVKVSPAEEKTAGGILLPDNAQEKPQIGEVVAVGPGKRNDDGSRSELDVKVGDKVLYSKYAGTDVKLS-GEDYV 91          
The following BLAST results are available for this feature:
BLAST of CX671771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 492
Match NameE-valueIdentityDescription
CH10_CLOPE5.649e-2051.6110 kDa chaperonin OS=Clostridium perfringens GN=gr... [more]
CH10_CLOP15.649e-2051.6110 kDa chaperonin OS=Clostridium perfringens (stra... [more]
CH10_CHLL25.649e-2051.0610 kDa chaperonin OS=Chlorobium limicola (strain D... [more]
CH10_PELPB7.378e-2050.5410 kDa chaperonin OS=Pelodictyon phaeoclathratifor... [more]
CH10_MYXXD7.378e-2049.4610 kDa chaperonin OS=Myxococcus xanthus (strain DK... [more]
CH10_CLOPS7.378e-2050.5410 kDa chaperonin OS=Clostridium perfringens (stra... [more]
CH10_BACHD7.378e-2053.2610 kDa chaperonin OS=Bacillus halodurans GN=groS P... [more]
CH10_GEOSL9.636e-2048.9410 kDa chaperonin OS=Geobacter sulfurreducens GN=g... [more]
CH10_GEOSF9.636e-2049.4610 kDa chaperonin OS=Geobacter sp. (strain FRC-32)... [more]
CH10_CYAA59.636e-2050.5510 kDa chaperonin OS=Cyanothece sp. (strain ATCC 5... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13A11_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13A11-A21-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671771 ID=CX671771; Name=CX671771; organism=Citrus sinensis; type=EST; length=806bp
AGAAACCTTATCAAACTACTCGCTCGCTTCTCGCTTATCATTTCCAATCA
GAATCTCTCTCGCTCTCTCTGCATCTGCAAGCAGATGGCGACAGCTCAGC
TAACAGCGTCATCAATTAAGGTTCCAGCAAGGAGCTTGACTTCATTCGAT
GGTCTCAGACCGTCTTCCGTCAAGTTCGCTTCCGTCGGAGGTGCTCCCAG
CCAACGCTCTTTCCGTCGCTTGGTCGTTAAAGCCGCTGCAGTCGTGGCTC
CCAAGTACACTTCAATTAAACCTTTGGGTGATAGAGTGCTGGTGAAAATC
AAGACTGTAGAGGAGAAAACTGATGGTGGTATTTTTCTGCCATCTACAGC
TCAAACAAAGCCTCAAGCAGGTGAGGTGGTAGCTGTTGGCGAGGGGAAGA
CAGTTGGGAAGACTAAACTGGACATATCTGTGAAGCCTGGGACCCAGGTC
ATCTATTCGAAGTATGCAGGGACTGAGTTGGAGTTCAATGGCGCAAATCA
TCTCATATTGAGGGAGGATGACGTAGTTGGCATTCTTGAAACAGATGAAA
TCAAGGATCTTAAGCCCCTTAATGACAGAGTTTTCATCAAGGTTGCTGAG
GCTGAGGAGACAACTGCTGGAGGTTTGTTGTTGACGGAGGCAAGCAAGGA
GAAACCTTCCATTGGAATGGTCATTGCTGTTGGACCCGGTCCTCTAGATG
AGGAAGGTAATAGGAAACCTCTATCCATTGCTCCAGGGAACACGGTGATG
TATTCCAAGTATGCAGGGGATGACTTCAAGGGCAGTGATGGTACCAACTA
CATTGC
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