CX671771

Overview
NameCX671771
Unique NameCX671771
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_OCEIH (10 kDa chaperonin OS=Oceanobacillus iheyensis GN=groS PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.147e-19
Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 537
            IKPLGDRV++++   EE T  GI LP +A+ KPQ G+VVAVG G+     K+ + V  G ++I+SK+AGTE+++ G  +LILRE+D++ I+
Sbjct:    2 IKPLGDRVVIELVEQEETTASGIVLPDSAKEKPQEGKVVAVGSGRVENGEKIALEVSEGDRIIFSKFAGTEVKYEGTEYLILRENDILAII 92          

HSP 2 Score: 75.0998 bits (183), Expect = 5.122e-13
Identity = 37/82 (45.12%), Postives = 58/82 (70.73%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            +KPL DRV I++ E EETTA G++L +++KEKP  G V+AVG G + E G +  L ++ G+ +++SK+AG + K  +GT Y+
Sbjct:    2 IKPLGDRVVIELVEQEETTASGIVLPDSAKEKPQEGKVVAVGSGRV-ENGEKIALEVSEGDRIIFSKFAGTEVK-YEGTEYL 81          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_CYAP8 (10 kDa chaperonin OS=Cyanothece sp. (strain PCC 8801) GN=groS PE=3 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.147e-19
Identity = 45/95 (47.37%), Postives = 68/95 (71.58%), Query Frame = 1
Query:  259 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 540
            +++KPLGDRV VK+   EEKT GGI LP TA+ KPQ GE+V VG GK     ++ +  VK G +V+YSKYAGT+++  G ++++L E D++ +++
Sbjct:    9 STVKPLGDRVFVKVSASEEKTAGGILLPDTAKEKPQIGEIVTVGPGKRNDDGSRSEPEVKVGDKVLYSKYAGTDIKLGGEDYVLLSEKDILAVVD 103          

HSP 2 Score: 89.3521 bits (220), Expect = 2.624e-17
Identity = 41/85 (48.24%), Postives = 60/85 (70.59%), Query Frame = 1
Query:  550 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            +  +KPL DRVF+KV+ +EE TAGG+LL + +KEKP IG ++ VGPG  +++G+R    +  G+ V+YSKYAG D K   G +Y+
Sbjct:    8 VSTVKPLGDRVFVKVSASEEKTAGGILLPDTAKEKPQIGEIVTVGPGKRNDDGSRSEPEVKVGDKVLYSKYAGTDIK-LGGEDYV 91          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_CHLPD (10 kDa chaperonin OS=Chlorobium phaeobacteroides (strain DSM 266) GN=groS PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.147e-19
Identity = 46/94 (48.94%), Postives = 65/94 (69.15%), Query Frame = 1
Query:  262 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 540
            ++KPL DRV+VK    EEKT GG+ +P T + KPQ GEVVAVG GK     + L++ +K G +V+Y KY+GTE+   G ++LI+RE D+  IL+
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLIIPDTGKEKPQYGEVVAVGTGKVADSGQLLEMQIKVGQKVLYGKYSGTEVSVEGEDYLIMRESDIFAILD 95          

HSP 2 Score: 72.4034 bits (176), Expect = 3.320e-12
Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 1
Query:  556 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            +LKPL DRV +K A AEE T GGL++ +  KEKP  G V+AVG G + + G    + I  G  V+Y KY+G +    +G +Y+
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLIIPDTGKEKPQYGEVVAVGTGKVADSGQLLEMQIKVGQKVLYGKYSGTEV-SVEGEDYL 83          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_BACTR (10 kDa chaperonin OS=Bacillus thermoglucosidasius GN=groS PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.147e-19
Identity = 46/92 (50.00%), Postives = 69/92 (75.00%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 537
            IKPLGDRV+++I   EEKT  GI LP TA+ KPQ G+VVAVG+G+ +    ++   V+ G ++I+SKYAGTE++++G  +LILRE D++ ++
Sbjct:    2 IKPLGDRVVIEIVETEEKTASGIVLPDTAKEKPQEGKVVAVGKGRVLDNGQRVAPEVEVGDRIIFSKYAGTEVKYDGKEYLILRESDILAVI 93          

HSP 2 Score: 73.9442 bits (180), Expect = 1.141e-12
Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            +KPL DRV I++ E EE TA G++L + +KEKP  G V+AVG G + + G R    +  G+ +++SKYAG + K  DG  Y+
Sbjct:    2 IKPLGDRVVIEIVETEEKTASGIVLPDTAKEKPQEGKVVAVGKGRVLDNGQRVAPEVEVGDRIIFSKYAGTEVK-YDGKEYL 82          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_GEOUR (10 kDa chaperonin OS=Geobacter uraniireducens (strain Rf4) GN=groS PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.804e-19
Identity = 46/93 (49.46%), Postives = 66/93 (70.97%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 540
            ++P+ DR++VK    E KT GGIF+P TA+ KP  GEVVAVG GK     K L + VK G +V++ KY+GTE++  G + LI+REDD++G++E
Sbjct:    3 LRPMQDRIIVKRVEEETKTAGGIFIPETAKEKPMEGEVVAVGNGKRTEDGKVLPLDVKVGDKVLFGKYSGTEIKVEGQDFLIMREDDILGVIE 95          

HSP 2 Score: 71.2478 bits (173), Expect = 7.395e-12
Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFK 780
            L+P+ DR+ +K  E E  TAGG+ + E +KEKP  G V+AVG G   E+G   PL +  G+ V++ KY+G + K
Sbjct:    3 LRPMQDRIIVKRVEEETKTAGGIFIPETAKEKPMEGEVVAVGNGKRTEDGKVLPLDVKVGDKVLFGKYSGTEIK 76          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_GEOMG (10 kDa chaperonin OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=groS PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.804e-19
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 540
            ++PL DR+LVK    E+ T GGIF+P TA+ KPQ GE+VAVG GK     K + I +K G +V++ KYAGT+++  G + LI+REDD++G++E
Sbjct:    3 LRPLQDRILVKRIEEEQVTAGGIFIPDTAKEKPQRGEIVAVGNGKKTEDGKVIPIDLKVGDKVLFGKYAGTDIKVEGEDFLIMREDDILGVIE 95          

HSP 2 Score: 73.1738 bits (178), Expect = 1.946e-12
Identity = 32/74 (43.24%), Postives = 48/74 (64.86%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFK 780
            L+PL DR+ +K  E E+ TAGG+ + + +KEKP  G ++AVG G   E+G   P+ +  G+ V++ KYAG D K
Sbjct:    3 LRPLQDRILVKRIEEEQVTAGGIFIPDTAKEKPQRGEIVAVGNGKKTEDGKVIPIDLKVGDKVLFGKYAGTDIK 76          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_DESAA (10 kDa chaperonin OS=Desulfatibacillum alkenivorans (strain AK-01) GN=groS PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.804e-19
Identity = 46/93 (49.46%), Postives = 66/93 (70.97%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 540
            ++PL DR+LVK    E KT GGI +P TA+ KP  GE+VAVG G+     TK+ + VK G +V++ KY+GTE++  G  +LI+REDDV+GI++
Sbjct:    3 LQPLADRILVKRLAEETKTKGGIIIPDTAKEKPAEGEIVAVGPGRNAEDGTKIALEVKVGDRVLFGKYSGTEVKIEGEEYLIMREDDVLGIVQ 95          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_CLOAB (10 kDa chaperonin OS=Clostridium acetobutylicum GN=groS PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.804e-19
Identity = 47/92 (51.09%), Postives = 65/92 (70.65%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 540
            I+PLGDRV++K    EE T  GI LPS+A+ KPQ  EVVAVG G  V   ++ + VK G +V +SKY+GTE++ +    LILR+DD++GI+E
Sbjct:    3 IRPLGDRVVIKRLEAEETTKSGIVLPSSAKEKPQMAEVVAVGPGGVVDGKEIQMQVKTGDKVFFSKYSGTEIKVDNEELLILRQDDILGIVE 94          

HSP 2 Score: 68.1662 bits (165), Expect = 6.261e-11
Identity = 33/74 (44.59%), Postives = 49/74 (66.22%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFK 780
            ++PL DRV IK  EAEETT  G++L  ++KEKP +  V+AVGPG +  +G    + +  G+ V +SKY+G + K
Sbjct:    3 IRPLGDRVVIKRLEAEETTKSGIVLPSSAKEKPQMAEVVAVGPGGV-VDGKEIQMQVKTGDKVFFSKYSGTEIK 75          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_LACPL (10 kDa chaperonin OS=Lactobacillus plantarum GN=groS PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.662e-19
Identity = 46/91 (50.55%), Postives = 69/91 (75.82%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGI 534
            +KPLGDRV+++ +  EE+T GGI + + A+ KPQ+G+VVAV +G+ +   TK+D SVK G QV++ KYAGTE+++ GA +L+L E D+V I
Sbjct:    2 LKPLGDRVILQQQEEEEQTIGGIVIANNAKEKPQSGKVVAVNDGRVLDNGTKVDPSVKVGDQVLFDKYAGTEVKYQGAKYLVLHEKDIVAI 92          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_CLOB8 (10 kDa chaperonin OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=groS PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.662e-19
Identity = 46/93 (49.46%), Postives = 66/93 (70.97%), Query Frame = 1
Query:  262 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 540
            +IKPLG+RV++K    EEKT  GI L  TA+ +PQ  EVVAVG G  V   ++ + VK G +V+YSKYAGTE++ +G  + IL++DD++ I+E
Sbjct:    2 NIKPLGERVVIKKLEAEEKTKSGIVLTGTAKERPQEAEVVAVGPGAVVDGNRVAMEVKVGDKVLYSKYAGTEVKVDGEEYTILKQDDILAIVE 94          

HSP 2 Score: 73.9442 bits (180), Expect = 1.141e-12
Identity = 39/82 (47.56%), Postives = 54/82 (65.85%), Query Frame = 1
Query:  556 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNY 801
            ++KPL +RV IK  EAEE T  G++LT  +KE+P    V+AVGPG +  +GNR  + +  G+ V+YSKYAG + K  DG  Y
Sbjct:    2 NIKPLGERVVIKKLEAEEKTKSGIVLTGTAKERPQEAEVVAVGPGAV-VDGNRVAMEVKVGDKVLYSKYAGTEVK-VDGEEY 81          
The following BLAST results are available for this feature:
BLAST of CX671771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 492
Match NameE-valueIdentityDescription
CH10_OCEIH2.147e-1948.3510 kDa chaperonin OS=Oceanobacillus iheyensis GN=g... [more]
CH10_CYAP82.147e-1947.3710 kDa chaperonin OS=Cyanothece sp. (strain PCC 88... [more]
CH10_CHLPD2.147e-1948.9410 kDa chaperonin OS=Chlorobium phaeobacteroides (... [more]
CH10_BACTR2.147e-1950.0010 kDa chaperonin OS=Bacillus thermoglucosidasius ... [more]
CH10_GEOUR2.804e-1949.4610 kDa chaperonin OS=Geobacter uraniireducens (str... [more]
CH10_GEOMG2.804e-1949.4610 kDa chaperonin OS=Geobacter metallireducens (st... [more]
CH10_DESAA2.804e-1949.4610 kDa chaperonin OS=Desulfatibacillum alkenivoran... [more]
CH10_CLOAB2.804e-1951.0910 kDa chaperonin OS=Clostridium acetobutylicum GN... [more]
CH10_LACPL3.662e-1950.5510 kDa chaperonin OS=Lactobacillus plantarum GN=gr... [more]
CH10_CLOB83.662e-1949.4610 kDa chaperonin OS=Clostridium beijerinckii (str... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13A11_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13A11-A21-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671771 ID=CX671771; Name=CX671771; organism=Citrus sinensis; type=EST; length=806bp
AGAAACCTTATCAAACTACTCGCTCGCTTCTCGCTTATCATTTCCAATCA
GAATCTCTCTCGCTCTCTCTGCATCTGCAAGCAGATGGCGACAGCTCAGC
TAACAGCGTCATCAATTAAGGTTCCAGCAAGGAGCTTGACTTCATTCGAT
GGTCTCAGACCGTCTTCCGTCAAGTTCGCTTCCGTCGGAGGTGCTCCCAG
CCAACGCTCTTTCCGTCGCTTGGTCGTTAAAGCCGCTGCAGTCGTGGCTC
CCAAGTACACTTCAATTAAACCTTTGGGTGATAGAGTGCTGGTGAAAATC
AAGACTGTAGAGGAGAAAACTGATGGTGGTATTTTTCTGCCATCTACAGC
TCAAACAAAGCCTCAAGCAGGTGAGGTGGTAGCTGTTGGCGAGGGGAAGA
CAGTTGGGAAGACTAAACTGGACATATCTGTGAAGCCTGGGACCCAGGTC
ATCTATTCGAAGTATGCAGGGACTGAGTTGGAGTTCAATGGCGCAAATCA
TCTCATATTGAGGGAGGATGACGTAGTTGGCATTCTTGAAACAGATGAAA
TCAAGGATCTTAAGCCCCTTAATGACAGAGTTTTCATCAAGGTTGCTGAG
GCTGAGGAGACAACTGCTGGAGGTTTGTTGTTGACGGAGGCAAGCAAGGA
GAAACCTTCCATTGGAATGGTCATTGCTGTTGGACCCGGTCCTCTAGATG
AGGAAGGTAATAGGAAACCTCTATCCATTGCTCCAGGGAACACGGTGATG
TATTCCAAGTATGCAGGGGATGACTTCAAGGGCAGTGATGGTACCAACTA
CATTGC
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