CX671771

Overview
NameCX671771
Unique NameCX671771
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_LISMF (10 kDa chaperonin OS=Listeria monocytogenes serotype 4b (strain F2365) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.065e-18
Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGI 534
            +KPLGDRV++++   EEKT  GI LP +A+ KPQ+G++VAVG G+ +   TK  + V  G  VI++KY+GTE+ + G ++LILRE D++ I
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92          

HSP 2 Score: 83.9593 bits (206), Expect = 1.103e-15
Identity = 39/82 (47.56%), Postives = 61/82 (74.39%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            LKPL DRV I+V EAEE TA G++L +++KEKP  G ++AVG G + + G ++PL +A G+TV+++KY+G +    +GT+Y+
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVT-YEGTDYL 82          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_LISMC (10 kDa chaperonin OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.065e-18
Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGI 534
            +KPLGDRV++++   EEKT  GI LP +A+ KPQ+G++VAVG G+ +   TK  + V  G  VI++KY+GTE+ + G ++LILRE D++ I
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92          

HSP 2 Score: 83.9593 bits (206), Expect = 1.103e-15
Identity = 39/82 (47.56%), Postives = 61/82 (74.39%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            LKPL DRV I+V EAEE TA G++L +++KEKP  G ++AVG G + + G ++PL +A G+TV+++KY+G +    +GT+Y+
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVT-YEGTDYL 82          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_LISIN (10 kDa chaperonin OS=Listeria innocua GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.065e-18
Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGI 534
            +KPLGDRV++++   EEKT  GI LP +A+ KPQ+G++VAVG G+ +   TK  + V  G  VI++KY+GTE+ + G ++LILRE D++ I
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92          

HSP 2 Score: 83.9593 bits (206), Expect = 1.103e-15
Identity = 39/82 (47.56%), Postives = 61/82 (74.39%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            LKPL DRV I+V EAEE TA G++L +++KEKP  G ++AVG G + + G ++PL +A G+TV+++KY+G +    +GT+Y+
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVT-YEGTDYL 82          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_LACRJ (10 kDa chaperonin OS=Lactobacillus reuteri (strain JCM 1112) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.065e-18
Identity = 47/93 (50.54%), Postives = 66/93 (70.97%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 540
            +KPLGDRV++K +T EEKT GGI L S  + KP  G+V+AVGEG+T+    KL  +VK G +V++ KYAG E+E+NG   L++   D+V I+E
Sbjct:    2 LKPLGDRVVLKAETEEEKTVGGIVLASNVKEKPTTGKVIAVGEGRTLENGQKLAPAVKEGDRVLFDKYAGNEVEYNGEKFLVVHAKDLVAIVE 94          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_LACRD (10 kDa chaperonin OS=Lactobacillus reuteri (strain DSM 20016) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.065e-18
Identity = 47/93 (50.54%), Postives = 66/93 (70.97%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 540
            +KPLGDRV++K +T EEKT GGI L S  + KP  G+V+AVGEG+T+    KL  +VK G +V++ KYAG E+E+NG   L++   D+V I+E
Sbjct:    2 LKPLGDRVVLKAETEEEKTVGGIVLASNVKEKPTTGKVIAVGEGRTLENGQKLAPAVKEGDRVLFDKYAGNEVEYNGEKFLVVHAKDLVAIVE 94          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_GEOLS (10 kDa chaperonin OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.065e-18
Identity = 45/93 (48.39%), Postives = 66/93 (70.97%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 540
            ++PL DR++VK    EEKT GG+F+P TA+ KPQ GEV+AVG GK   + K   + VK G  +++ KYAGTE++ +G   L++REDDV+ ++E
Sbjct:    3 LRPLHDRIIVKRLEGEEKTAGGLFIPDTAKEKPQKGEVIAVGNGKKNDEGKCAPLDVKVGDSILFGKYAGTEVKVDGDEFLMMREDDVLAVIE 95          

HSP 2 Score: 78.1814 bits (191), Expect = 6.050e-14
Identity = 37/82 (45.12%), Postives = 55/82 (67.07%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            L+PL+DR+ +K  E EE TAGGL + + +KEKP  G VIAVG G  ++EG   PL +  G+++++ KYAG + K  DG  ++
Sbjct:    3 LRPLHDRIIVKRLEGEEKTAGGLFIPDTAKEKPQKGEVIAVGNGKKNDEGKCAPLDVKVGDSILFGKYAGTEVK-VDGDEFL 83          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_CYAP4 (10 kDa chaperonin OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.065e-18
Identity = 46/94 (48.94%), Postives = 66/94 (70.21%), Query Frame = 1
Query:  259 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 537
            +++KPLGDRV VK+   EEKT GGI LP TA+ KPQ GE+VAVG GK     ++ +  VK G +V+YSKYAGT+++     +++L E D++ I+
Sbjct:    9 STVKPLGDRVFVKVSASEEKTAGGILLPDTAKEKPQVGEIVAVGPGKRNDDGSRQEPEVKIGDKVLYSKYAGTDIKLGTEEYVLLSEKDILAIV 102          

HSP 2 Score: 90.1225 bits (222), Expect = 1.538e-17
Identity = 39/77 (50.65%), Postives = 58/77 (75.32%), Query Frame = 1
Query:  550 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFK 780
            +  +KPL DRVF+KV+ +EE TAGG+LL + +KEKP +G ++AVGPG  +++G+R+   +  G+ V+YSKYAG D K
Sbjct:    8 VSTVKPLGDRVFVKVSASEEKTAGGILLPDTAKEKPQVGEIVAVGPGKRNDDGSRQEPEVKIGDKVLYSKYAGTDIK 84          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_BACP3 (10 kDa chaperonin OS=Bacillus PS3 GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.065e-18
Identity = 44/92 (47.83%), Postives = 66/92 (71.74%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 537
            +KPLGDR+++++   EEKT  GI LP TA+ KPQ G VVAVG G+ +    ++    K G +VI+SKYAGTE++++G  +LILRE D++ ++
Sbjct:    2 LKPLGDRIVIEVVETEEKTASGIVLPDTAKEKPQEGRVVAVGAGRVLDNGQRIGRKSKVGDRVIFSKYAGTEVKYDGKEYLILRESDILAVI 93          

HSP 2 Score: 72.7886 bits (177), Expect = 2.542e-12
Identity = 38/82 (46.34%), Postives = 52/82 (63.41%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            LKPL DR+ I+V E EE TA G++L + +KEKP  G V+AVG G + + G R       G+ V++SKYAG + K  DG  Y+
Sbjct:    2 LKPLGDRIVIEVVETEEKTASGIVLPDTAKEKPQEGRVVAVGAGRVLDNGQRIGRKSKVGDRVIFSKYAGTEVK-YDGKEYL 82          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_BACHK (10 kDa chaperonin OS=Bacillus thuringiensis subsp. konkukian GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.065e-18
Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 537
            +KPLGDRV++++   EEKT  GI LP TA+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LILRE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93          

HSP 2 Score: 82.0333 bits (201), Expect = 4.190e-15
Identity = 41/82 (50.00%), Postives = 58/82 (70.73%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG + K  +GT+Y+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYL 82          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_BACCZ (10 kDa chaperonin OS=Bacillus cereus (strain ZK / E33L) GN=groS PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.065e-18
Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 537
            +KPLGDRV++++   EEKT  GI LP TA+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LILRE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93          

HSP 2 Score: 82.0333 bits (201), Expect = 4.190e-15
Identity = 41/82 (50.00%), Postives = 58/82 (70.73%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG + K  +GT+Y+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYL 82          
The following BLAST results are available for this feature:
BLAST of CX671771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 492
Match NameE-valueIdentityDescription
CH10_LISMF1.065e-1848.3510 kDa chaperonin OS=Listeria monocytogenes seroty... [more]
CH10_LISMC1.065e-1848.3510 kDa chaperonin OS=Listeria monocytogenes seroty... [more]
CH10_LISIN1.065e-1848.3510 kDa chaperonin OS=Listeria innocua GN=groS PE=3... [more]
CH10_LACRJ1.065e-1850.5410 kDa chaperonin OS=Lactobacillus reuteri (strain... [more]
CH10_LACRD1.065e-1850.5410 kDa chaperonin OS=Lactobacillus reuteri (strain... [more]
CH10_GEOLS1.065e-1848.3910 kDa chaperonin OS=Geobacter lovleyi (strain ATC... [more]
CH10_CYAP41.065e-1848.9410 kDa chaperonin OS=Cyanothece sp. (strain PCC 74... [more]
CH10_BACP31.065e-1847.8310 kDa chaperonin OS=Bacillus PS3 GN=groS PE=3 SV=... [more]
CH10_BACHK1.065e-1846.7410 kDa chaperonin OS=Bacillus thuringiensis subsp.... [more]
CH10_BACCZ1.065e-1846.7410 kDa chaperonin OS=Bacillus cereus (strain ZK / ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13A11_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13A11-A21-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671771 ID=CX671771; Name=CX671771; organism=Citrus sinensis; type=EST; length=806bp
AGAAACCTTATCAAACTACTCGCTCGCTTCTCGCTTATCATTTCCAATCA
GAATCTCTCTCGCTCTCTCTGCATCTGCAAGCAGATGGCGACAGCTCAGC
TAACAGCGTCATCAATTAAGGTTCCAGCAAGGAGCTTGACTTCATTCGAT
GGTCTCAGACCGTCTTCCGTCAAGTTCGCTTCCGTCGGAGGTGCTCCCAG
CCAACGCTCTTTCCGTCGCTTGGTCGTTAAAGCCGCTGCAGTCGTGGCTC
CCAAGTACACTTCAATTAAACCTTTGGGTGATAGAGTGCTGGTGAAAATC
AAGACTGTAGAGGAGAAAACTGATGGTGGTATTTTTCTGCCATCTACAGC
TCAAACAAAGCCTCAAGCAGGTGAGGTGGTAGCTGTTGGCGAGGGGAAGA
CAGTTGGGAAGACTAAACTGGACATATCTGTGAAGCCTGGGACCCAGGTC
ATCTATTCGAAGTATGCAGGGACTGAGTTGGAGTTCAATGGCGCAAATCA
TCTCATATTGAGGGAGGATGACGTAGTTGGCATTCTTGAAACAGATGAAA
TCAAGGATCTTAAGCCCCTTAATGACAGAGTTTTCATCAAGGTTGCTGAG
GCTGAGGAGACAACTGCTGGAGGTTTGTTGTTGACGGAGGCAAGCAAGGA
GAAACCTTCCATTGGAATGGTCATTGCTGTTGGACCCGGTCCTCTAGATG
AGGAAGGTAATAGGAAACCTCTATCCATTGCTCCAGGGAACACGGTGATG
TATTCCAAGTATGCAGGGGATGACTTCAAGGGCAGTGATGGTACCAACTA
CATTGC
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