CX671771

Overview
NameCX671771
Unique NameCX671771
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_SYNS9 (10 kDa chaperonin OS=Synechococcus sp. (strain CC9902) GN=groS PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.391e-18
Identity = 44/81 (54.32%), Postives = 61/81 (75.31%), Query Frame = 1
Query:  550 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFK-GSD 789
            +  +KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V+ VGPG  +E+G+R+   +  G+ V+YSKYAG D K GSD
Sbjct:    8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKPNEDGSRQAPEVGIGDKVLYSKYAGTDIKLGSD 88          

HSP 2 Score: 88.5817 bits (218), Expect = 4.476e-17
Identity = 45/94 (47.87%), Postives = 63/94 (67.02%), Query Frame = 1
Query:  259 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 537
            +++KPLGDRV VK+   EEKT GGI LP TA+ KPQ GEVV VG GK     ++    V  G +V+YSKYAGT+++     +++L E D++ I+
Sbjct:    9 STVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKPNEDGSRQAPEVGIGDKVLYSKYAGTDIKLGSDEYVLLSEKDILAIV 102          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_LISW6 (10 kDa chaperonin OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=groS PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.391e-18
Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGI 534
            +KPLGDRV++++   EEKT  GI LP +A+ KPQ+G++VAVG G+ +   TK  + V  G  VI++KY+GTE+ + G ++LILRE D++ I
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLENGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92          

HSP 2 Score: 85.1149 bits (209), Expect = 4.949e-16
Identity = 40/82 (48.78%), Postives = 61/82 (74.39%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            LKPL DRV I+V EAEE TA G++L +++KEKP  G ++AVG G + E G ++PL +A G+TV+++KY+G +    +GT+Y+
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLENGTKEPLEVAEGDTVIFAKYSGTEVT-YEGTDYL 82          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_LACHE (10 kDa chaperonin OS=Lactobacillus helveticus GN=groS PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.391e-18
Identity = 46/91 (50.55%), Postives = 63/91 (69.23%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGI 534
            ++P+GDRV+VK+K  EEKT GGI L S A+ KP  GEVVAVGEG       K+ +SVK G  V+Y +Y+GT +E+ G  +L+L E D++ I
Sbjct:    2 LQPIGDRVIVKVKDEEEKTVGGIVLASNAKKKPTEGEVVAVGEGAYASNGEKIPMSVKKGDVVLYDRYSGTNVEYEGEKYLVLHEKDILAI 92          

HSP 2 Score: 70.8626 bits (172), Expect = 9.659e-12
Identity = 32/82 (39.02%), Postives = 53/82 (64.63%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            L+P+ DRV +KV + EE T GG++L   +K+KP+ G V+AVG G     G + P+S+  G+ V+Y +Y+G + +  +G  Y+
Sbjct:    2 LQPIGDRVIVKVKDEEEKTVGGIVLASNAKKKPTEGEVVAVGEGAYASNGEKIPMSVKKGDVVLYDRYSGTNVE-YEGEKYL 82          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_LACH4 (10 kDa chaperonin OS=Lactobacillus helveticus (strain DPC 4571) GN=groS PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.391e-18
Identity = 46/91 (50.55%), Postives = 63/91 (69.23%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGI 534
            ++P+GDRV+VK+K  EEKT GGI L S A+ KP  GEVVAVGEG       K+ +SVK G  V+Y +Y+GT +E+ G  +L+L E D++ I
Sbjct:    2 LQPIGDRVIVKVKDEEEKTVGGIVLASNAKKKPTEGEVVAVGEGAYASNGEKIPMSVKKGDVVLYDRYSGTNVEYEGEKYLVLHEKDILAI 92          

HSP 2 Score: 70.8626 bits (172), Expect = 9.659e-12
Identity = 32/82 (39.02%), Postives = 53/82 (64.63%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            L+P+ DRV +KV + EE T GG++L   +K+KP+ G V+AVG G     G + P+S+  G+ V+Y +Y+G + +  +G  Y+
Sbjct:    2 LQPIGDRVIVKVKDEEEKTVGGIVLASNAKKKPTEGEVVAVGEGAYASNGEKIPMSVKKGDVVLYDRYSGTNVE-YEGEKYL 82          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_GEOTN (10 kDa chaperonin OS=Geobacillus thermodenitrificans (strain NG80-2) GN=groS PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.391e-18
Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 537
            +KPLGDR+++++   EEKT  GI LP TA+ KPQ G VVAVG G+ +    ++   V+ G ++I+SKYAGTE++++G  +LILRE D++ ++
Sbjct:    2 LKPLGDRIVIEVVETEEKTASGIVLPDTAKEKPQEGRVVAVGTGRVLDNGQRVAPEVEVGDRIIFSKYAGTEVKYDGKEYLILRESDILAVI 93          

HSP 2 Score: 74.7146 bits (182), Expect = 6.689e-13
Identity = 37/82 (45.12%), Postives = 53/82 (64.63%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            LKPL DR+ I+V E EE TA G++L + +KEKP  G V+AVG G + + G R    +  G+ +++SKYAG + K  DG  Y+
Sbjct:    2 LKPLGDRIVIEVVETEEKTASGIVLPDTAKEKPQEGRVVAVGTGRVLDNGQRVAPEVEVGDRIIFSKYAGTEVK-YDGKEYL 82          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_GEOSW (10 kDa chaperonin OS=Geobacillus sp. (strain WCH70) GN=groS PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.391e-18
Identity = 44/92 (47.83%), Postives = 68/92 (73.91%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 537
            +KPLGDRV++++   EEKT  GI LP TA+ KPQ G VVAVG+G+ +   + +   V+ G ++I+SKYAGTE++++G  +LILRE D++ ++
Sbjct:    2 LKPLGDRVVIEVIETEEKTASGIVLPDTAKEKPQEGRVVAVGKGRVLDSGECVAPEVEVGDRIIFSKYAGTEVKYDGKEYLILRESDILAVI 93          

HSP 2 Score: 71.633 bits (174), Expect = 5.663e-12
Identity = 37/82 (45.12%), Postives = 52/82 (63.41%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            LKPL DRV I+V E EE TA G++L + +KEKP  G V+AVG G + + G      +  G+ +++SKYAG + K  DG  Y+
Sbjct:    2 LKPLGDRVVIEVIETEEKTASGIVLPDTAKEKPQEGRVVAVGKGRVLDSGECVAPEVEVGDRIIFSKYAGTEVK-YDGKEYL 82          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_GEOKA (10 kDa chaperonin OS=Geobacillus kaustophilus GN=groS PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.391e-18
Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 537
            +KPLGDR+++++   EEKT  GI LP TA+ KPQ G VVAVG G+ +    ++   V+ G ++I+SKYAGTE++++G  +LILRE D++ ++
Sbjct:    1 MKPLGDRIVIEVVETEEKTASGIVLPDTAKEKPQEGRVVAVGAGRVLDNGQRIAPEVEVGDRIIFSKYAGTEVKYDGKEYLILRESDILAVI 92          

HSP 2 Score: 73.559 bits (179), Expect = 1.490e-12
Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            +KPL DR+ I+V E EE TA G++L + +KEKP  G V+AVG G + + G R    +  G+ +++SKYAG + K  DG  Y+
Sbjct:    1 MKPLGDRIVIEVVETEEKTASGIVLPDTAKEKPQEGRVVAVGAGRVLDNGQRIAPEVEVGDRIIFSKYAGTEVK-YDGKEYL 81          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_BACSU (10 kDa chaperonin OS=Bacillus subtilis GN=groS PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.391e-18
Identity = 42/92 (45.65%), Postives = 67/92 (72.83%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 537
            +KPLGDRV++++   EEKT  GI LP +A+ KPQ G++VA G G+ +    ++ + VK G ++I+SKYAGTE+++ G  +LILRE D++ ++
Sbjct:    2 LKPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKIVAAGSGRVLESGERVALEVKEGDRIIFSKYAGTEVKYEGTEYLILRESDILAVI 93          

HSP 2 Score: 77.7962 bits (190), Expect = 7.901e-14
Identity = 37/82 (45.12%), Postives = 56/82 (68.29%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            LKPL DRV I++ E+EE TA G++L +++KEKP  G ++A G G + E G R  L +  G+ +++SKYAG + K  +GT Y+
Sbjct:    2 LKPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKIVAAGSGRVLESGERVALEVKEGDRIIFSKYAGTEVK-YEGTEYL 82          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_BACA2 (10 kDa chaperonin OS=Bacillus amyloliquefaciens (strain FZB42) GN=groS PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.391e-18
Identity = 42/92 (45.65%), Postives = 67/92 (72.83%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 537
            +KPLGDRV++++   EEKT  GI LP +A+ KPQ G++VA G G+ +    ++ + VK G ++I+SKYAGTE+++ G  +LILRE D++ ++
Sbjct:    2 LKPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKIVAAGSGRVLESGERVALEVKEGDRIIFSKYAGTEVKYEGTEYLILRESDILAVI 93          

HSP 2 Score: 77.7962 bits (190), Expect = 7.901e-14
Identity = 37/82 (45.12%), Postives = 56/82 (68.29%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            LKPL DRV I++ E+EE TA G++L +++KEKP  G ++A G G + E G R  L +  G+ +++SKYAG + K  +GT Y+
Sbjct:    2 LKPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKIVAAGSGRVLESGERVALEVKEGDRIIFSKYAGTEVK-YEGTEYL 82          
BLAST of CX671771 vs. ExPASy Swiss-Prot
Match: CH10_TETHA (10 kDa chaperonin OS=Tetragenococcus halophilus GN=groS PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.817e-18
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 1
Query:  265 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 540
            +KPLGDRVL+++   EEKT GGI L STAQ KPQ G+VVAVG G+T+   +L  + V  G  V++ KYAG+E++++G +++I    D+V I+E
Sbjct:    2 LKPLGDRVLIEVSEEEEKTVGGIVLASTAQEKPQTGKVVAVGPGRTLDNGELATVPVNVGDTVLFEKYAGSEVKYDGQDYMIFSAKDLVAIVE 94          

HSP 2 Score: 77.7962 bits (190), Expect = 7.901e-14
Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 1
Query:  559 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGDDFKGSDGTNYI 804
            LKPL DRV I+V+E EE T GG++L   ++EKP  G V+AVGPG   + G    + +  G+TV++ KYAG + K  DG +Y+
Sbjct:    2 LKPLGDRVLIEVSEEEEKTVGGIVLASTAQEKPQTGKVVAVGPGRTLDNGELATVPVNVGDTVLFEKYAGSEVK-YDGQDYM 82          
The following BLAST results are available for this feature:
BLAST of CX671771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 492
Match NameE-valueIdentityDescription
CH10_SYNS91.391e-1854.3210 kDa chaperonin OS=Synechococcus sp. (strain CC9... [more]
CH10_LISW61.391e-1848.3510 kDa chaperonin OS=Listeria welshimeri serovar 6... [more]
CH10_LACHE1.391e-1850.5510 kDa chaperonin OS=Lactobacillus helveticus GN=g... [more]
CH10_LACH41.391e-1850.5510 kDa chaperonin OS=Lactobacillus helveticus (str... [more]
CH10_GEOTN1.391e-1846.7410 kDa chaperonin OS=Geobacillus thermodenitrifica... [more]
CH10_GEOSW1.391e-1847.8310 kDa chaperonin OS=Geobacillus sp. (strain WCH70... [more]
CH10_GEOKA1.391e-1846.7410 kDa chaperonin OS=Geobacillus kaustophilus GN=g... [more]
CH10_BACSU1.391e-1845.6510 kDa chaperonin OS=Bacillus subtilis GN=groS PE=... [more]
CH10_BACA21.391e-1845.6510 kDa chaperonin OS=Bacillus amyloliquefaciens (s... [more]
CH10_TETHA1.817e-1849.4610 kDa chaperonin OS=Tetragenococcus halophilus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13A11_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13A11-A21-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671771 ID=CX671771; Name=CX671771; organism=Citrus sinensis; type=EST; length=806bp
AGAAACCTTATCAAACTACTCGCTCGCTTCTCGCTTATCATTTCCAATCA
GAATCTCTCTCGCTCTCTCTGCATCTGCAAGCAGATGGCGACAGCTCAGC
TAACAGCGTCATCAATTAAGGTTCCAGCAAGGAGCTTGACTTCATTCGAT
GGTCTCAGACCGTCTTCCGTCAAGTTCGCTTCCGTCGGAGGTGCTCCCAG
CCAACGCTCTTTCCGTCGCTTGGTCGTTAAAGCCGCTGCAGTCGTGGCTC
CCAAGTACACTTCAATTAAACCTTTGGGTGATAGAGTGCTGGTGAAAATC
AAGACTGTAGAGGAGAAAACTGATGGTGGTATTTTTCTGCCATCTACAGC
TCAAACAAAGCCTCAAGCAGGTGAGGTGGTAGCTGTTGGCGAGGGGAAGA
CAGTTGGGAAGACTAAACTGGACATATCTGTGAAGCCTGGGACCCAGGTC
ATCTATTCGAAGTATGCAGGGACTGAGTTGGAGTTCAATGGCGCAAATCA
TCTCATATTGAGGGAGGATGACGTAGTTGGCATTCTTGAAACAGATGAAA
TCAAGGATCTTAAGCCCCTTAATGACAGAGTTTTCATCAAGGTTGCTGAG
GCTGAGGAGACAACTGCTGGAGGTTTGTTGTTGACGGAGGCAAGCAAGGA
GAAACCTTCCATTGGAATGGTCATTGCTGTTGGACCCGGTCCTCTAGATG
AGGAAGGTAATAGGAAACCTCTATCCATTGCTCCAGGGAACACGGTGATG
TATTCCAAGTATGCAGGGGATGACTTCAAGGGCAGTGATGGTACCAACTA
CATTGC
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