CX671770

Overview
NameCX671770
Unique NameCX671770
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_ENTFA (10 kDa chaperonin OS=Enterococcus faecalis GN=groS PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.188e-18
Identity = 44/93 (47.31%), Postives = 66/93 (70.97%), Query Frame = -3 
Query:  464 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 739
            +KPLGDRV++++   EEKT GGI L S A+ KPQ GEV+AVGEG+ +   TK+ + VK G  V++ KY+GTE+++ G  +LI+   D++  +E
Sbjct:    2 LKPLGDRVVIRVAKEEEKTVGGIVLASVAKEKPQTGEVIAVGEGRVLENGTKVPMEVKIGDTVMFEKYSGTEVKYEGVEYLIVSAKDIIATVE 94

HSP 2 Score: 87.0409 bits (214), Expect = 1.568e-16
Identity = 42/93 (45.16%), Postives = 62/93 (66.67%), Query Frame = -3 
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            LKPL DRV I+VA+ EE T GG++L   +KEKP  G VIAVG G + E G + P+ +  G+TVM+ KY+G + K  +G  Y+ + A +++A +
Sbjct:    2 LKPLGDRVVIRVAKEEEKTVGGIVLASVAKEKPQTGEVIAVGEGRVLENGTKVPMEVKIGDTVMFEKYSGTEVK-YEGVEYLIVSAKDIIATV 93
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_DESPS (10 kDa chaperonin OS=Desulfotalea psychrophila GN=groS PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.188e-18
Identity = 46/93 (49.46%), Postives = 66/93 (70.97%), Query Frame = -3 
Query:  464 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 739
            I+PL DR+LVK    EEKT GGI +P +A+ KP  G+VVAVG GK      ++ + VK G  V++SKY GT+++ +G + LI+REDD++GI+E
Sbjct:    3 IRPLNDRLLVKRLAEEEKTAGGIIIPDSAKEKPAEGQVVAVGPGKVSDSGERVALQVKEGDLVLFSKYGGTDVKLDGEDFLIMREDDILGIME 95

HSP 2 Score: 87.8113 bits (216), Expect = 9.193e-17
Identity = 37/93 (39.78%), Postives = 64/93 (68.82%), Query Frame = -3 
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            ++PLNDR+ +K    EE TAGG+++ +++KEKP+ G V+AVGPG + + G R  L +  G+ V++SKY G D K  DG +++ +R  +++ ++
Sbjct:    3 IRPLNDRLLVKRLAEEEKTAGGIIIPDSAKEKPAEGQVVAVGPGKVSDSGERVALQVKEGDLVLFSKYGGTDVK-LDGEDFLIMREDDILGIM 94
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_CLOK5 (10 kDa chaperonin OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=groS PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.188e-18
Identity = 43/92 (46.74%), Postives = 64/92 (69.57%), Query Frame = -3 
Query:  464 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 739
            I+PLGDRV++K    EE T  GI LP +A+ KPQ  E+VAVG G  +   ++ + VK G +V++SKYAG E++ +G  + ILR+DD++ I+E
Sbjct:    3 IRPLGDRVVIKKIEAEETTKSGIVLPGSAKEKPQEAEIVAVGPGGVIDGKEIKMEVKVGDRVLFSKYAGNEVKIDGVEYTILRQDDILAIIE 94

HSP 2 Score: 79.7221 bits (195), Expect = 2.504e-14
Identity = 40/93 (43.01%), Postives = 61/93 (65.59%), Query Frame = -3 
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            ++PL DRV IK  EAEETT  G++L  ++KEKP    ++AVGPG +  +G    + +  G+ V++SKYAGN+ K  DG  Y  LR  +++A++
Sbjct:    3 IRPLGDRVVIKKIEAEETTKSGIVLPGSAKEKPQEAEIVAVGPGGV-IDGKEIKMEVKVGDRVLFSKYAGNEVK-IDGVEYTILRQDDILAII 93
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_CLOK1 (10 kDa chaperonin OS=Clostridium kluyveri (strain NBRC 12016) GN=groS PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.188e-18
Identity = 43/92 (46.74%), Postives = 64/92 (69.57%), Query Frame = -3 
Query:  464 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 739
            I+PLGDRV++K    EE T  GI LP +A+ KPQ  E+VAVG G  +   ++ + VK G +V++SKYAG E++ +G  + ILR+DD++ I+E
Sbjct:    3 IRPLGDRVVIKKIEAEETTKSGIVLPGSAKEKPQEAEIVAVGPGGVIDGKEIKMEVKVGDRVLFSKYAGNEVKIDGVEYTILRQDDILAIIE 94

HSP 2 Score: 79.7221 bits (195), Expect = 2.504e-14
Identity = 40/93 (43.01%), Postives = 61/93 (65.59%), Query Frame = -3 
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            ++PL DRV IK  EAEETT  G++L  ++KEKP    ++AVGPG +  +G    + +  G+ V++SKYAGN+ K  DG  Y  LR  +++A++
Sbjct:    3 IRPLGDRVVIKKIEAEETTKSGIVLPGSAKEKPQEAEIVAVGPGGV-IDGKEIKMEVKVGDRVLFSKYAGNEVK-IDGVEYTILRQDDILAII 93
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_ARTS2 (10 kDa chaperonin OS=Arthrobacter sp. (strain FB24) GN=groS PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.188e-18
Identity = 44/93 (47.31%), Postives = 68/93 (73.12%), Query Frame = -3 
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            +KPL DR+ ++  EAE+TTA GL++ ++++EKP  G V+AVGPG   E+GNR P+ +A G+ V+YSKY G + K + GT Y+ L A +V+A++
Sbjct:    5 IKPLEDRIVVRPLEAEQTTASGLVIPDSAQEKPQEGEVVAVGPGRF-EDGNRVPVDVAVGDVVIYSKYGGTEVK-TGGTEYLVLSARDVLAIV 95

HSP 2 Score: 84.3445 bits (207), Expect = 1.016e-15
Identity = 42/92 (45.65%), Postives = 59/92 (64.13%), Query Frame = -3 
Query:  467 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 742
            SIKPL DR++V+    E+ T  G+ +P +AQ KPQ GEVVAVG G+     ++ + V  G  VIYSKY GTE++  G  +L+L   DV+ I+
Sbjct:    4 SIKPLEDRIVVRPLEAEQTTASGLVIPDSAQEKPQEGEVVAVGPGRFEDGNRVPVDVAVGDVVIYSKYGGTEVKTGGTEYLVLSARDVLAIV 95
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_ANOFW (10 kDa chaperonin OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=groS PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.188e-18
Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = -3 
Query:  467 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 739
            +KPLGDR+++++   EEKT  GI LP TA+ KPQ G+VVAVG G+ +    ++   V  G ++I+SKYAGTE++++G  +LILRE D++ ++
Sbjct:    2 LKPLGDRIVIELIQTEEKTASGIVLPDTAKEKPQEGKVVAVGSGRVLDNGERVAPEVSVGDRIIFSKYAGTEVKYDGKEYLILRESDILAVI 93

HSP 2 Score: 83.9593 bits (206), Expect = 1.328e-15
Identity = 40/93 (43.01%), Postives = 63/93 (67.74%), Query Frame = -3 
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            LKPL DR+ I++ + EE TA G++L + +KEKP  G V+AVG G + + G R    ++ G+ +++SKYAG + K  DG  Y+ LR S+++AV+
Sbjct:    2 LKPLGDRIVIELIQTEEKTASGIVLPDTAKEKPQEGKVVAVGSGRVLDNGERVAPEVSVGDRIIFSKYAGTEVK-YDGKEYLILRESDILAVI 93
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_PROAC (10 kDa chaperonin OS=Propionibacterium acnes GN=groS PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.858e-18
Identity = 42/93 (45.16%), Postives = 65/93 (69.89%), Query Frame = -3 
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            +KPL DRV ++  EAE+TTA GL++ + +KEKP  G VI+ GPG +D++G R P+ +  G+ V++SKY G + K  DG  Y+ L A +++AV+
Sbjct:    5 IKPLEDRVLVQPLEAEQTTASGLVIPDTAKEKPQEGKVISAGPGRVDDKGTRVPMDVKEGDVVIFSKYGGTEVK-YDGQEYLLLNARDILAVV 96

HSP 2 Score: 85.5001 bits (210), Expect = 4.563e-16
Identity = 41/95 (43.16%), Postives = 65/95 (68.42%), Query Frame = -3 
Query:  464 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 745
            T+IKPL DRVLV+    E+ T  G+ +P TA+ KPQ G+V++ G G+   K T++ + VK G  VI+SKY GTE++++G  +L+L   D++ ++E
Sbjct:    3 TTIKPLEDRVLVQPLEAEQTTASGLVIPDTAKEKPQEGKVISAGPGRVDDKGTRVPMDVKEGDVVIFSKYGGTEVKYDGQEYLLLNARDILAVVE 97
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_CYAPA (10 kDa chaperonin, cyanelle OS=Cyanophora paradoxa GN=groS-A PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.858e-18
Identity = 42/100 (42.00%), Postives = 69/100 (69.00%), Query Frame = -3 
Query:  164 TDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 463
            T  +K ++PL +RV +KV+++EE TAGG+LL +  KEKP IG +IA GPG  +++G+ +PL +   + V+YSKYAG D K  +   Y+ L   +++A+++
Sbjct:    5 TLNVKTVRPLGERVLVKVSQSEEKTAGGILLPDTVKEKPQIGEIIAEGPGRRNDDGSFQPLEVTVNSKVLYSKYAGTDIK-LENEEYVLLSEKDILAIIA 103

HSP 2 Score: 83.9593 bits (206), Expect = 1.328e-15
Identity = 39/93 (41.94%), Postives = 61/93 (65.59%), Query Frame = -3 
Query:  467 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLD-ISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 742
            +++PLG+RVLVK+   EEKT GGI LP T + KPQ GE++A G G+         + V   ++V+YSKYAGT+++     +++L E D++ I+
Sbjct:   10 TVRPLGERVLVKVSQSEEKTAGGILLPDTVKEKPQIGEIIAEGPGRRNDDGSFQPLEVTVNSKVLYSKYAGTDIKLENEEYVLLSEKDILAII 102
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_CLOCE (10 kDa chaperonin OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=groS PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.858e-18
Identity = 44/92 (47.83%), Postives = 65/92 (70.65%), Query Frame = -3 
Query:  464 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 739
            IKPLGDRV++K+   EE T  GI LP +A+ KPQ  E+VAVG G  V   ++ + VK G +V+ SKY+GTE++F+G  + IL++ D++ I+E
Sbjct:    3 IKPLGDRVVIKMLESEETTKSGIVLPGSAKEKPQVAEIVAVGPGTVVDGKEVKMEVKVGDRVLTSKYSGTEVKFDGQEYTILKQGDILAIVE 94

HSP 2 Score: 77.0258 bits (188), Expect = 1.623e-13
Identity = 37/93 (39.78%), Postives = 61/93 (65.59%), Query Frame = -3 
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            +KPL DRV IK+ E+EETT  G++L  ++KEKP +  ++AVGPG +  +G    + +  G+ V+ SKY+G + K  DG  Y  L+  +++A++
Sbjct:    3 IKPLGDRVVIKMLESEETTKSGIVLPGSAKEKPQVAEIVAVGPGTV-VDGKEVKMEVKVGDRVLTSKYSGTEVK-FDGQEYTILKQGDILAIV 93
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH101_RHOBA (10 kDa chaperonin 1 OS=Rhodopirellula baltica GN=groS1 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.858e-18
Identity = 45/92 (48.91%), Postives = 68/92 (73.91%), Query Frame = -3 
Query:  173 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMA 448
            +L+PL+DRV ++ +EAEETTAGG++L +++KEKP  G V+AVGPG L + GNR  LS++ G+ V+Y KY G++ +  DG     LR S+++A
Sbjct:    8 NLRPLDDRVVVQPSEAEETTAGGIVLPDSAKEKPQRGTVVAVGPGKLLDSGNRGELSVSVGDVVIYGKYGGSEIE-VDGHEMKILRESDILA 98

HSP 2 Score: 82.4185 bits (202), Expect = 3.862e-15
Identity = 44/93 (47.31%), Postives = 60/93 (64.52%), Query Frame = -3 
Query:  476 KYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVV 751
            K  +++PL DRV+V+    EE T GGI LP +A+ KPQ G VVAVG GK +    + ++SV  G  VIY KY G+E+E +G    ILRE D++
Sbjct:    5 KKINLRPLDDRVVVQPSEAEETTAGGIVLPDSAKEKPQRGTVVAVGPGKLLDSGNRGELSVSVGDVVIYGKYGGSEIEVDGHEMKILRESDIL 97
The following BLAST results are available for this feature:
BLAST of CX671770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH10_ENTFA2.188e-1847.3110 kDa chaperonin OS=Enterococcus faecalis GN=groS... [more]
CH10_DESPS2.188e-1849.4610 kDa chaperonin OS=Desulfotalea psychrophila GN=... [more]
CH10_CLOK52.188e-1846.7410 kDa chaperonin OS=Clostridium kluyveri (strain ... [more]
CH10_CLOK12.188e-1846.7410 kDa chaperonin OS=Clostridium kluyveri (strain ... [more]
CH10_ARTS22.188e-1847.3110 kDa chaperonin OS=Arthrobacter sp. (strain FB24... [more]
CH10_ANOFW2.188e-1846.7410 kDa chaperonin OS=Anoxybacillus flavithermus (s... [more]
CH10_PROAC2.858e-1845.1610 kDa chaperonin OS=Propionibacterium acnes GN=gr... [more]
CH10_CYAPA2.858e-1842.0010 kDa chaperonin, cyanelle OS=Cyanophora paradoxa... [more]
CH10_CLOCE2.858e-1847.8310 kDa chaperonin OS=Clostridium cellulolyticum (s... [more]
CH101_RHOBA2.858e-1848.9110 kDa chaperonin 1 OS=Rhodopirellula baltica GN=g... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13A11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13A11-A21-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671770 ID=CX671770; Name=CX671770; organism=Citrus sinensis; type=EST; length=906bp
TTTTTTTTAAGCAAAAAACAAGCAGCAATTCGATTGATCAAGCTGCAATT
CTTTATGTTCAAATAAGATTACATTCAAAATCCGTATGCCTTGAGGCAAC
TCAACCATAAAATTCAATTCACTAATACATATAAAGCCTCGCTCAAGTAA
ACACAGACAACTAAGAGAGCACAGCCATCACTTCAGAAGCTCTTAAAGCA
ATGTAGTTGGTACCATCACTGCCCTTGAAGTCATTCCCTGCATACTTGGA
ATACATCACCGTGTTCCCTGGAGCAATGGATAGAGGTTTCCTATTACCTT
CCTCATCTAGAGGACCGGGTCCAACAGCAATGACCATTCCAATGGAAGGT
TTCTCCTTGCTTGCCTCCGTCAACAACAAACCTCCAGCAGTTGTCTCCTC
AGCCTCAGCAACCTTGATGAAAACTCTGTCATTAAGGGGCTTAAGATCCT
TGATTTCATCTGTTTCAAGAATGCCAACTACGTCATCCTCCCTCAATATG
AGATGATTTGCGCCATTGAACTCCAACTCAGTCCCTGCATACTTCGAATA
GATGACCTGGGTCCCAGGCTTCACAGATATGTCCAGTTTAGTCTTCCCAA
CTGTCTTCCCCTCGCCAACAGCTACCACCTCACCTGCTTGAGGCTTTGTT
TGAGCTGTAGATGGCAGAAAAATACCACCATCAGTTTTCTCCTCTACAGT
CTTGATTTTCACCAGCACTCTATCACCCAAAGGTTTAATTGAAGTGTACT
TGGGAGCCACGACTGCAGCGGCTTTAACGACCAAGCGACGGAAAGAGCGT
TGGCTGGGAGCACCTCCGACGGAAGCGAACTTGACGGAAGACGGTCTGAG
ACCATCGAATGAAGTCAAGCTCCTTGCTGGAACCTTAATTGATGACGCTG
TTAGCT
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