CX671770
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_CYAA5 (10 kDa chaperonin OS=Cyanothece sp. (strain ATCC 51142) GN=groS PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.802e-20 Identity = 46/94 (48.94%), Postives = 68/94 (72.34%), Query Frame = -3 Query: 173 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMA 454 + +KPL DR+F+KV+ AEE TAGG+LL + ++EKP IG V+AVGPG +++G+R L + G+ V+YSKYAG D K S G +Y+ L +++A Sbjct: 8 VSTVKPLGDRIFVKVSPAEEKTAGGILLPDNAQEKPQIGEVVAVGPGKRNDDGSRSELDVKVGDKVLYSKYAGTDVKLS-GEDYVLLSEKDILA 100 HSP 2 Score: 97.4413 bits (241), Expect = 1.160e-19 Identity = 46/91 (50.55%), Postives = 67/91 (73.63%), Query Frame = -3 Query: 476 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVV 745 +++KPLGDR+ VK+ EEKT GGI LP AQ KPQ GEVVAVG GK ++ ++ VK G +V+YSKYAGT+++ +G ++++L E D++ Sbjct: 9 STVKPLGDRIFVKVSPAEEKTAGGILLPDNAQEKPQIGEVVAVGPGKRNDDGSRSELDVKVGDKVLYSKYAGTDVKLSGEDYVLLSEKDIL 99
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_CLOPE (10 kDa chaperonin OS=Clostridium perfringens GN=groS PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.802e-20 Identity = 48/93 (51.61%), Postives = 65/93 (69.89%), Query Frame = -3 Query: 464 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 742 SIKPLGDRV++K EE T GI + TA+ +PQ EVVAVG G V + ++ VK G +V+YSKYAGTE++F G + ILR+DD++ I+E Sbjct: 2 SIKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAIVDGKRTEMEVKIGDKVLYSKYAGTEVKFEGEEYTILRQDDILAIVE 94 HSP 2 Score: 81.2629 bits (199), Expect = 8.605e-15 Identity = 41/93 (44.09%), Postives = 61/93 (65.59%), Query Frame = -3 Query: 167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445 +KPL DRV IK EAEETT G+++T +KE+P V+AVGPG + +G R + + G+ V+YSKYAG + K +G Y LR +++A++ Sbjct: 3 IKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAI-VDGKRTEMEVKIGDKVLYSKYAGTEVK-FEGEEYTILRQDDILAIV 93
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_CLOP1 (10 kDa chaperonin OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=groS PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.802e-20 Identity = 48/93 (51.61%), Postives = 65/93 (69.89%), Query Frame = -3 Query: 464 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 742 SIKPLGDRV++K EE T GI + TA+ +PQ EVVAVG G V + ++ VK G +V+YSKYAGTE++F G + ILR+DD++ I+E Sbjct: 2 SIKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAIVDGKRTEMEVKIGDKVLYSKYAGTEVKFEGEEYTILRQDDILAIVE 94 HSP 2 Score: 81.2629 bits (199), Expect = 8.605e-15 Identity = 41/93 (44.09%), Postives = 61/93 (65.59%), Query Frame = -3 Query: 167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445 +KPL DRV IK EAEETT G+++T +KE+P V+AVGPG + +G R + + G+ V+YSKYAG + K +G Y LR +++A++ Sbjct: 3 IKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAI-VDGKRTEMEVKIGDKVLYSKYAGTEVK-FEGEEYTILRQDDILAIV 93
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_CHLL2 (10 kDa chaperonin OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=groS PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.802e-20 Identity = 48/94 (51.06%), Postives = 65/94 (69.15%), Query Frame = -3 Query: 464 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 742 ++KPL DRV+VK EEKT GG+F+P T + KPQ GEVVAVG GK + LD+ V G +V+Y KY+GTE+ G ++LI+RE D+ IL+ Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLFIPDTGKEKPQYGEVVAVGPGKVADNGQLLDMQVTVGKKVLYGKYSGTEVNVEGEDYLIMRESDIFAILD 95 HSP 2 Score: 84.7297 bits (208), Expect = 7.783e-16 Identity = 40/94 (42.55%), Postives = 59/94 (62.77%), Query Frame = -3 Query: 167 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 448 +LKPL DRV +K A AEE T GGL + + KEKP G V+AVGPG + + G + + G V+Y KY+G + +G +Y+ +R S++ A+L Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLFIPDTGKEKPQYGEVVAVGPGKVADNGQLLDMQVTVGKKVLYGKYSGTEV-NVEGEDYLIMRESDIFAIL 94
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_SYNP6 (10 kDa chaperonin OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=groS PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.884e-20 Identity = 46/98 (46.94%), Postives = 72/98 (73.47%), Query Frame = -3 Query: 164 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVLS 454 + + PL DRVF+KVAEAEE TAGG++L + +KEKP +G ++AVGPG +++G+R+ + G+ V+YSKYAG D K G+D +Y+ L +++AV++ Sbjct: 8 VSTVTPLGDRVFVKVAEAEEKTAGGIILPDNAKEKPQVGEIVAVGPGKRNDDGSRQAPEVKIGDKVLYSKYAGTDIKLGND--DYVLLSEKDILAVVA 103 HSP 2 Score: 88.5817 bits (218), Expect = 5.390e-17 Identity = 43/94 (45.74%), Postives = 64/94 (68.09%), Query Frame = -3 Query: 467 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 745 +++ PLGDRV VK+ EEKT GGI LP A+ KPQ GE+VAVG GK ++ VK G +V+YSKYAGT+++ ++++L E D++ ++ Sbjct: 9 STVTPLGDRVFVKVAEAEEKTAGGIILPDNAKEKPQVGEIVAVGPGKRNDDGSRQAPEVKIGDKVLYSKYAGTDIKLGNDDYVLLSEKDILAVV 102
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_SYNE7 (10 kDa chaperonin OS=Synechococcus elongatus (strain PCC 7942) GN=groS PE=3 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 8.884e-20 Identity = 46/98 (46.94%), Postives = 72/98 (73.47%), Query Frame = -3 Query: 164 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVLS 454 + + PL DRVF+KVAEAEE TAGG++L + +KEKP +G ++AVGPG +++G+R+ + G+ V+YSKYAG D K G+D +Y+ L +++AV++ Sbjct: 8 VSTVTPLGDRVFVKVAEAEEKTAGGIILPDNAKEKPQVGEIVAVGPGKRNDDGSRQAPEVKIGDKVLYSKYAGTDIKLGND--DYVLLSEKDILAVVA 103 HSP 2 Score: 88.5817 bits (218), Expect = 5.390e-17 Identity = 43/94 (45.74%), Postives = 64/94 (68.09%), Query Frame = -3 Query: 467 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 745 +++ PLGDRV VK+ EEKT GGI LP A+ KPQ GE+VAVG GK ++ VK G +V+YSKYAGT+++ ++++L E D++ ++ Sbjct: 9 STVTPLGDRVFVKVAEAEEKTAGGIILPDNAKEKPQVGEIVAVGPGKRNDDGSRQAPEVKIGDKVLYSKYAGTDIKLGNDDYVLLSEKDILAVV 102
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_PELPB (10 kDa chaperonin OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=groS PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.884e-20 Identity = 47/93 (50.54%), Postives = 66/93 (70.97%), Query Frame = -3 Query: 467 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 742 ++KPL DRV+VK EEKT GG+++P T + KPQ GEVVAVG GK + L++ VK G++V+Y KY+GTE+ G ++LI+RE D+ IL Sbjct: 2 NLKPLSDRVIVKPAAAEEKTKGGLYIPDTGKEKPQYGEVVAVGAGKIADNGQLLEMQVKVGSKVLYGKYSGTEVSVEGEDYLIMRESDIFAIL 94 HSP 2 Score: 82.8037 bits (203), Expect = 2.957e-15 Identity = 39/94 (41.49%), Postives = 60/94 (63.83%), Query Frame = -3 Query: 167 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 448 +LKPL+DRV +K A AEE T GGL + + KEKP G V+AVG G + + G + + G+ V+Y KY+G + +G +Y+ +R S++ A+L Sbjct: 2 NLKPLSDRVIVKPAAAEEKTKGGLYIPDTGKEKPQYGEVVAVGAGKIADNGQLLEMQVKVGSKVLYGKYSGTEV-SVEGEDYLIMRESDIFAIL 94
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_MYXXD (10 kDa chaperonin OS=Myxococcus xanthus (strain DK 1622) GN=groS PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.884e-20 Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = -3 Query: 464 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 739 I+PL DR++VK E KT GG+F+P TA+ KP G+V+AVG GK K+ + +K G +++SKYAGTE++ +G HLILRE+DV+G++E Sbjct: 3 IRPLQDRLIVKRVAEENKTKGGLFIPDTAKEKPLEGKVIAVGNGKVQEDGKVRPLDIKAGDTILFSKYAGTEIKLDGEEHLILREEDVLGVIE 95 HSP 2 Score: 83.9593 bits (206), Expect = 1.328e-15 Identity = 40/93 (43.01%), Postives = 60/93 (64.52%), Query Frame = -3 Query: 167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445 ++PL DR+ +K E T GGL + + +KEKP G VIAVG G + E+G +PL I G+T+++SKYAG + K DG ++ LR +V+ V+ Sbjct: 3 IRPLQDRLIVKRVAEENKTKGGLFIPDTAKEKPLEGKVIAVGNGKVQEDGKVRPLDIKAGDTILFSKYAGTEIK-LDGEEHLILREEDVLGVI 94
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_CLOPS (10 kDa chaperonin OS=Clostridium perfringens (strain SM101 / Type A) GN=groS PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.884e-20 Identity = 47/93 (50.54%), Postives = 65/93 (69.89%), Query Frame = -3 Query: 464 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 742 SIKPLGDRV++K EE T GI + TA+ +PQ EVVAVG G + + ++ VK G +V+YSKYAGTE++F G + ILR+DD++ I+E Sbjct: 2 SIKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAIIDGKRTEMEVKIGDKVLYSKYAGTEVKFEGEEYTILRQDDILAIVE 94 HSP 2 Score: 80.8777 bits (198), Expect = 1.124e-14 Identity = 41/93 (44.09%), Postives = 61/93 (65.59%), Query Frame = -3 Query: 167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445 +KPL DRV IK EAEETT G+++T +KE+P V+AVGPG + +G R + + G+ V+YSKYAG + K +G Y LR +++A++ Sbjct: 3 IKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAI-IDGKRTEMEVKIGDKVLYSKYAGTEVK-FEGEEYTILRQDDILAIV 93
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_BEUC1 (10 kDa chaperonin OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=groS PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.884e-20 Identity = 45/93 (48.39%), Postives = 67/93 (72.04%), Query Frame = -3 Query: 167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445 +KPL DR+ +K EAE+TTA GL++ + +KEKP G V+A+GPG +D+ GNR P+ +A G+ V+YSKY G + K + G Y+ L A +V+AV+ Sbjct: 5 IKPLEDRIVVKTLEAEQTTASGLVIPDTAKEKPQEGEVLAIGPGRVDDNGNRVPVDVAVGDVVIYSKYGGTEVKYA-GQEYLILSARDVLAVV 96 HSP 2 Score: 82.8037 bits (203), Expect = 2.957e-15 Identity = 41/94 (43.62%), Postives = 61/94 (64.89%), Query Frame = -3 Query: 464 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 742 SIKPL DR++VK E+ T G+ +P TA+ KPQ GEV+A+G G+ ++ + V G VIYSKY GTE+++ G +LIL DV+ +++ Sbjct: 4 SIKPLEDRIVVKTLEAEQTTASGLVIPDTAKEKPQEGEVLAIGPGRVDDNGNRVPVDVAVGDVVIYSKYGGTEVKYAGQEYLILSARDVLAVVQ 97 The following BLAST results are available for this feature:
BLAST of CX671770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671770 ID=CX671770; Name=CX671770; organism=Citrus sinensis; type=EST; length=906bpback to top |