CX671770

Overview
NameCX671770
Unique NameCX671770
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_CLOBA (10 kDa chaperonin OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=groS PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.515e-19
Identity = 46/92 (50.00%), Postives = 67/92 (72.83%), Query Frame = -3
Query:  464 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 739
            IKPLG+RV++K    EEKT  GI L  +A+  PQ  EVVAVG G  V  TK+++ VK G +V+YSKY+GTE++ +G  ++IL++DD++ I+E
Sbjct:    3 IKPLGNRVVIKRLEAEEKTKSGIVLTGSAKEVPQEAEVVAVGPGSIVDGTKIEMEVKVGDKVLYSKYSGTEVKLDGEEYMILKQDDILAIVE 94          

HSP 2 Score: 75.0998 bits (183), Expect = 6.167e-13
Identity = 38/93 (40.86%), Postives = 61/93 (65.59%), Query Frame = -3
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            +KPL +RV IK  EAEE T  G++LT ++KE P    V+AVGPG +  +G +  + +  G+ V+YSKY+G + K  DG  Y+ L+  +++A++
Sbjct:    3 IKPLGNRVVIKRLEAEEKTKSGIVLTGSAKEVPQEAEVVAVGPGSI-VDGTKIEMEVKVGDKVLYSKYSGTEVK-LDGEEYMILKQDDILAIV 93          
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_CHLP8 (10 kDa chaperonin OS=Chlorobaculum parvum (strain NCIB 8327) GN=groS PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.515e-19
Identity = 47/93 (50.54%), Postives = 65/93 (69.89%), Query Frame = -3
Query:  467 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 742
            ++KPL DRV+VK    EEKT GG+++P T + KPQ GEVVAVGEGK     +L  + VK G +V+Y KY+GTE++    ++LI+RE D+  IL
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPQYGEVVAVGEGKVADNGQLVQMQVKVGDKVLYGKYSGTEVQVEAEDYLIMRESDIFAIL 94          

HSP 2 Score: 79.337 bits (194), Expect = 3.270e-14
Identity = 38/94 (40.43%), Postives = 59/94 (62.77%), Query Frame = -3
Query:  167 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 448
            +LKPL DRV +K A AEE T GGL + +  KEKP  G V+AVG G + + G    + +  G+ V+Y KY+G + +  +  +Y+ +R S++ A+L
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPQYGEVVAVGEGKVADNGQLVQMQVKVGDKVLYGKYSGTEVQ-VEAEDYLIMRESDIFAIL 94          
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_NOSP7 (10 kDa chaperonin OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=groS PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.979e-19
Identity = 47/97 (48.45%), Postives = 70/97 (72.16%), Query Frame = -3
Query:  167 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVL 454
            +  +KPL+DRVF+KV  +EE TAGGL L + +KEKP +G V+A+GPG  +E+G+R+ L I  G+ V+YSKYAG D K G++   Y+ L   +++AV+
Sbjct:    8 VSTVKPLSDRVFVKVNASEEKTAGGLYLPDTAKEKPQVGEVVALGPGKRNEDGSRQELEIKVGDKVLYSKYAGTDIKLGTE--EYVLLSEKDILAVV 102          

HSP 2 Score: 93.2041 bits (230), Expect = 2.188e-18
Identity = 42/94 (44.68%), Postives = 67/94 (71.28%), Query Frame = -3
Query:  467 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 745
            +++KPL DRV VK+   EEKT GG++LP TA+ KPQ GEVVA+G GK     ++ ++ +K G +V+YSKYAGT+++     +++L E D++ ++
Sbjct:    9 STVKPLSDRVFVKVNASEEKTAGGLYLPDTAKEKPQVGEVVALGPGKRNEDGSRQELEIKVGDKVLYSKYAGTDIKLGTEEYVLLSEKDILAVV 102          
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_MICLC (10 kDa chaperonin OS=Micrococcus luteus (strain ATCC 4698 / IFO 3333 / NCTC 2665) GN=groS PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.979e-19
Identity = 45/94 (47.87%), Postives = 66/94 (70.21%), Query Frame = -3
Query:  164 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 445
            +KPL DR+ ++  EAE+TTA GL++ + +KEKP  G V+AVGPG + E GNR P+ +A G+ V+YSKY G + K   G  Y+ L A +V+AV++
Sbjct:    5 IKPLEDRIVVRPLEAEQTTASGLVIPDTAKEKPQEGQVVAVGPGRVAENGNRVPVDVAEGDVVLYSKYGGTEVK-VGGEEYLVLSARDVLAVVT 97          

HSP 2 Score: 79.7221 bits (195), Expect = 2.504e-14
Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = -3
Query:  467 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 742
            SIKPL DR++V+    E+ T  G+ +P TA+ KPQ G+VVAVG G+      ++ + V  G  V+YSKY GTE++  G  +L+L   DV+ ++
Sbjct:    4 SIKPLEDRIVVRPLEAEQTTASGLVIPDTAKEKPQEGQVVAVGPGRVAENGNRVPVDVAEGDVVLYSKYGGTEVKVGGEEYLVLSARDVLAVV 96          
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_CALS8 (10 kDa chaperonin OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=groS PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.979e-19
Identity = 46/92 (50.00%), Postives = 64/92 (69.57%), Query Frame = -3
Query:  464 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 739
            I+P+GDR+L+K K  EE T  GI LP T + KPQ  EV+ VG G  V   K+++ VK G +VI SKYAGTE++ +G  + I+R+DDV+ I+E
Sbjct:    3 IRPIGDRILIKFKEREEVTKSGIVLPDTVKEKPQIAEVIEVGPGGIVDGEKVEMVVKKGDKVIVSKYAGTEIKIDGEEYTIIRQDDVLAIIE 94          

HSP 2 Score: 73.9442 bits (180), Expect = 1.374e-12
Identity = 37/93 (39.78%), Postives = 57/93 (61.29%), Query Frame = -3
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            ++P+ DR+ IK  E EE T  G++L +  KEKP I  VI VGPG +  +G +  + +  G+ V+ SKYAG + K  DG  Y  +R  +V+A++
Sbjct:    3 IRPIGDRILIKFKEREEVTKSGIVLPDTVKEKPQIAEVIEVGPGGI-VDGEKVEMVVKKGDKVIVSKYAGTEIK-IDGEEYTIIRQDDVLAII 93          
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_ANATD (10 kDa chaperonin OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=groS PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.979e-19
Identity = 46/92 (50.00%), Postives = 64/92 (69.57%), Query Frame = -3
Query:  464 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 739
            I+P+GDR+L+K K  EE T  GI LP T + KPQ  EV+ VG G  V   K+++ VK G +VI SKYAGTE++ +G  + I+R+DDV+ I+E
Sbjct:    3 IRPIGDRILIKFKEREEVTKSGIVLPDTVKEKPQIAEVIEVGPGGIVDGEKVEMVVKKGDKVIVSKYAGTEIKIDGEEYTIIRQDDVLAIIE 94          

HSP 2 Score: 73.9442 bits (180), Expect = 1.374e-12
Identity = 37/93 (39.78%), Postives = 57/93 (61.29%), Query Frame = -3
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            ++P+ DR+ IK  E EE T  G++L +  KEKP I  VI VGPG +  +G +  + +  G+ V+ SKYAG + K  DG  Y  +R  +V+A++
Sbjct:    3 IRPIGDRILIKFKEREEVTKSGIVLPDTVKEKPQIAEVIEVGPGGI-VDGEKVEMVVKKGDKVIVSKYAGTEIK-IDGEEYTIIRQDDVLAII 93          
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_SYNY3 (10 kDa chaperonin OS=Synechocystis sp. (strain PCC 6803) GN=groS PE=1 SV=3)

HSP 1 Score: 96.2857 bits (238), Expect = 2.585e-19
Identity = 45/94 (47.87%), Postives = 65/94 (69.15%), Query Frame = -3
Query:  173 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMA 454
            +  +KPL DRVF+KV+ AEE TAGG+LL + +KEKP IG V+ VGPG  +++G   P+ +  G+ V+YSKYAG D K   G +Y+ L   +++A
Sbjct:    8 VSTVKPLGDRVFVKVSPAEEKTAGGILLPDNAKEKPQIGEVVQVGPGKRNDDGTYSPVEVKVGDKVLYSKYAGTDIK-LGGDDYVLLTEKDILA 100          

HSP 2 Score: 93.2041 bits (230), Expect = 2.188e-18
Identity = 46/91 (50.55%), Postives = 63/91 (69.23%), Query Frame = -3
Query:  476 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVV 745
            +++KPLGDRV VK+   EEKT GGI LP  A+ KPQ GEVV VG GK     T   + VK G +V+YSKYAGT+++  G ++++L E D++
Sbjct:    9 STVKPLGDRVFVKVSPAEEKTAGGILLPDNAKEKPQIGEVVQVGPGKRNDDGTYSPVEVKVGDKVLYSKYAGTDIKLGGDDYVLLTEKDIL 99          
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_OCEIH (10 kDa chaperonin OS=Oceanobacillus iheyensis GN=groS PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.585e-19
Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = -3
Query:  467 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 739
            IKPLGDRV++++   EE T  GI LP +A+ KPQ G+VVAVG G+     K+ + V  G ++I+SK+AGTE+++ G  +LILRE+D++ I+
Sbjct:    2 IKPLGDRVVIELVEQEETTASGIVLPDSAKEKPQEGKVVAVGSGRVENGEKIALEVSEGDRIIFSKFAGTEVKYEGTEYLILRENDILAII 92          

HSP 2 Score: 84.7297 bits (208), Expect = 7.783e-16
Identity = 40/93 (43.01%), Postives = 67/93 (72.04%), Query Frame = -3
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            +KPL DRV I++ E EETTA G++L +++KEKP  G V+AVG G + E G +  L ++ G+ +++SK+AG + K  +GT Y+ LR ++++A++
Sbjct:    2 IKPLGDRVVIELVEQEETTASGIVLPDSAKEKPQEGKVVAVGSGRV-ENGEKIALEVSEGDRIIFSKFAGTEVK-YEGTEYLILRENDILAII 92          
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_CYAP8 (10 kDa chaperonin OS=Cyanothece sp. (strain PCC 8801) GN=groS PE=3 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.585e-19
Identity = 44/96 (45.83%), Postives = 67/96 (69.79%), Query Frame = -3
Query:  167 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 454
            +  +KPL DRVF+KV+ +EE TAGG+LL + +KEKP IG ++ VGPG  +++G+R    +  G+ V+YSKYAG D K   G +Y+ L   +++AV+
Sbjct:    8 VSTVKPLGDRVFVKVSASEEKTAGGILLPDTAKEKPQIGEIVTVGPGKRNDDGSRSEPEVKVGDKVLYSKYAGTDIK-LGGEDYVLLSEKDILAVV 102          

HSP 2 Score: 96.2857 bits (238), Expect = 2.585e-19
Identity = 45/95 (47.37%), Postives = 68/95 (71.58%), Query Frame = -3
Query:  464 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 745
            +++KPLGDRV VK+   EEKT GGI LP TA+ KPQ GE+V VG GK     ++ +  VK G +V+YSKYAGT+++  G ++++L E D++ +++
Sbjct:    9 STVKPLGDRVFVKVSASEEKTAGGILLPDTAKEKPQIGEIVTVGPGKRNDDGSRSEPEVKVGDKVLYSKYAGTDIKLGGEDYVLLSEKDILAVVD 103          
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_CHLPD (10 kDa chaperonin OS=Chlorobium phaeobacteroides (strain DSM 266) GN=groS PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.585e-19
Identity = 46/94 (48.94%), Postives = 65/94 (69.15%), Query Frame = -3
Query:  464 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 742
            ++KPL DRV+VK    EEKT GG+ +P T + KPQ GEVVAVG GK     + L++ +K G +V+Y KY+GTE+   G ++LI+RE D+  IL+
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLIIPDTGKEKPQYGEVVAVGTGKVADSGQLLEMQIKVGQKVLYGKYSGTEVSVEGEDYLIMRESDIFAILD 95          

HSP 2 Score: 82.4185 bits (202), Expect = 3.862e-15
Identity = 40/94 (42.55%), Postives = 59/94 (62.77%), Query Frame = -3
Query:  167 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 448
            +LKPL DRV +K A AEE T GGL++ +  KEKP  G V+AVG G + + G    + I  G  V+Y KY+G +    +G +Y+ +R S++ A+L
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLIIPDTGKEKPQYGEVVAVGTGKVADSGQLLEMQIKVGQKVLYGKYSGTEV-SVEGEDYLIMRESDIFAIL 94          
The following BLAST results are available for this feature:
BLAST of CX671770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH10_CLOBA1.515e-1950.0010 kDa chaperonin OS=Clostridium botulinum (strain... [more]
CH10_CHLP81.515e-1950.5410 kDa chaperonin OS=Chlorobaculum parvum (strain ... [more]
CH10_NOSP71.979e-1948.4510 kDa chaperonin OS=Nostoc punctiforme (strain AT... [more]
CH10_MICLC1.979e-1947.8710 kDa chaperonin OS=Micrococcus luteus (strain AT... [more]
CH10_CALS81.979e-1950.0010 kDa chaperonin OS=Caldicellulosiruptor saccharo... [more]
CH10_ANATD1.979e-1950.0010 kDa chaperonin OS=Anaerocellum thermophilum (st... [more]
CH10_SYNY32.585e-1947.8710 kDa chaperonin OS=Synechocystis sp. (strain PCC... [more]
CH10_OCEIH2.585e-1948.3510 kDa chaperonin OS=Oceanobacillus iheyensis GN=g... [more]
CH10_CYAP82.585e-1945.8310 kDa chaperonin OS=Cyanothece sp. (strain PCC 88... [more]
CH10_CHLPD2.585e-1948.9410 kDa chaperonin OS=Chlorobium phaeobacteroides (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13A11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13A11-A21-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671770 ID=CX671770; Name=CX671770; organism=Citrus sinensis; type=EST; length=906bp
TTTTTTTTAAGCAAAAAACAAGCAGCAATTCGATTGATCAAGCTGCAATT
CTTTATGTTCAAATAAGATTACATTCAAAATCCGTATGCCTTGAGGCAAC
TCAACCATAAAATTCAATTCACTAATACATATAAAGCCTCGCTCAAGTAA
ACACAGACAACTAAGAGAGCACAGCCATCACTTCAGAAGCTCTTAAAGCA
ATGTAGTTGGTACCATCACTGCCCTTGAAGTCATTCCCTGCATACTTGGA
ATACATCACCGTGTTCCCTGGAGCAATGGATAGAGGTTTCCTATTACCTT
CCTCATCTAGAGGACCGGGTCCAACAGCAATGACCATTCCAATGGAAGGT
TTCTCCTTGCTTGCCTCCGTCAACAACAAACCTCCAGCAGTTGTCTCCTC
AGCCTCAGCAACCTTGATGAAAACTCTGTCATTAAGGGGCTTAAGATCCT
TGATTTCATCTGTTTCAAGAATGCCAACTACGTCATCCTCCCTCAATATG
AGATGATTTGCGCCATTGAACTCCAACTCAGTCCCTGCATACTTCGAATA
GATGACCTGGGTCCCAGGCTTCACAGATATGTCCAGTTTAGTCTTCCCAA
CTGTCTTCCCCTCGCCAACAGCTACCACCTCACCTGCTTGAGGCTTTGTT
TGAGCTGTAGATGGCAGAAAAATACCACCATCAGTTTTCTCCTCTACAGT
CTTGATTTTCACCAGCACTCTATCACCCAAAGGTTTAATTGAAGTGTACT
TGGGAGCCACGACTGCAGCGGCTTTAACGACCAAGCGACGGAAAGAGCGT
TGGCTGGGAGCACCTCCGACGGAAGCGAACTTGACGGAAGACGGTCTGAG
ACCATCGAATGAAGTCAAGCTCCTTGCTGGAACCTTAATTGATGACGCTG
TTAGCT
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