CX671770

Overview
NameCX671770
Unique NameCX671770
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_MYCBP (10 kDa chaperonin OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=groS PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.409e-19
Identity = 46/96 (47.92%), Postives = 69/96 (71.88%), Query Frame = -3 
Query:  164 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 448
            ++KPL D++ ++  EAE TTA GL++ + +KEKP  G V+AVGPG  DE+G ++ PL +A G+TV+YSKY G + K  +G  Y+ L A +V+AV+S
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99

HSP 2 Score: 84.3445 bits (207), Expect = 1.016e-15
Identity = 42/94 (44.68%), Postives = 61/94 (64.89%), Query Frame = -3 
Query:  467 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK--TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 742
            +IKPL D++LV+    E  T  G+ +P TA+ KPQ G VVAVG G+    G+ ++ + V  G  VIYSKY GTE+++NG  +LIL   DV+ ++
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVV 98
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_MYCBO (10 kDa chaperonin OS=Mycobacterium bovis GN=groS PE=1 SV=4)

HSP 1 Score: 95.5153 bits (236), Expect = 4.409e-19
Identity = 46/96 (47.92%), Postives = 69/96 (71.88%), Query Frame = -3 
Query:  164 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 448
            ++KPL D++ ++  EAE TTA GL++ + +KEKP  G V+AVGPG  DE+G ++ PL +A G+TV+YSKY G + K  +G  Y+ L A +V+AV+S
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99

HSP 2 Score: 84.3445 bits (207), Expect = 1.016e-15
Identity = 42/94 (44.68%), Postives = 61/94 (64.89%), Query Frame = -3 
Query:  467 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK--TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 742
            +IKPL D++LV+    E  T  G+ +P TA+ KPQ G VVAVG G+    G+ ++ + V  G  VIYSKY GTE+++NG  +LIL   DV+ ++
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVV 98
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_LACPL (10 kDa chaperonin OS=Lactobacillus plantarum GN=groS PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.409e-19
Identity = 46/91 (50.55%), Postives = 69/91 (75.82%), Query Frame = -3 
Query:  470 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGI 739
            +KPLGDRV+++ +  EE+T GGI + + A+ KPQ+G+VVAV +G+ +   TK+D SVK G QV++ KYAGTE+++ GA +L+L E D+V I
Sbjct:    2 LKPLGDRVILQQQEEEEQTIGGIVIANNAKEKPQSGKVVAVNDGRVLDNGTKVDPSVKVGDQVLFDKYAGTEVKYQGAKYLVLHEKDIVAI 92

HSP 2 Score: 72.4034 bits (176), Expect = 3.997e-12
Identity = 35/92 (38.04%), Postives = 55/92 (59.78%), Query Frame = -3 
Query:  170 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAV 445
            LKPL DRV ++  E EE T GG+++   +KEKP  G V+AV  G + + G +   S+  G+ V++ KYAG + K   G  Y+ L   +++A+
Sbjct:    2 LKPLGDRVILQQQEEEEQTIGGIVIANNAKEKPQSGKVVAVNDGRVLDNGTKVDPSVKVGDQVLFDKYAGTEVK-YQGAKYLVLHEKDIVAI 92
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_CLOB8 (10 kDa chaperonin OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=groS PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.409e-19
Identity = 46/93 (49.46%), Postives = 66/93 (70.97%), Query Frame = -3 
Query:  464 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 742
            +IKPLG+RV++K    EEKT  GI L  TA+ +PQ  EVVAVG G  V   ++ + VK G +V+YSKYAGTE++ +G  + IL++DD++ I+E
Sbjct:    2 NIKPLGERVVIKKLEAEEKTKSGIVLTGTAKERPQEAEVVAVGPGAVVDGNRVAMEVKVGDKVLYSKYAGTEVKVDGEEYTILKQDDILAIVE 94

HSP 2 Score: 81.2629 bits (199), Expect = 8.605e-15
Identity = 41/94 (43.62%), Postives = 62/94 (65.96%), Query Frame = -3 
Query:  167 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 448
            ++KPL +RV IK  EAEE T  G++LT  +KE+P    V+AVGPG +  +GNR  + +  G+ V+YSKYAG + K  DG  Y  L+  +++A++
Sbjct:    2 NIKPLGERVVIKKLEAEEKTKSGIVLTGTAKERPQEAEVVAVGPGAV-VDGNRVAMEVKVGDKVLYSKYAGTEVK-VDGEEYTILKQDDILAIV 93
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_CHLPB (10 kDa chaperonin OS=Chlorobium phaeobacteroides (strain BS1) GN=groS PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.409e-19
Identity = 46/94 (48.94%), Postives = 65/94 (69.15%), Query Frame = -3 
Query:  464 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 742
            ++KPL DRV+VK    EEKT GG+++P T + KPQ GEVVAVG GK     + L++ V  G +V+Y KY+GTE+   G ++LI+RE D+  IL+
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPQYGEVVAVGAGKVADSGQLLEMQVAVGNKVLYGKYSGTEVAVEGEDYLIMRESDIFAILD 95

HSP 2 Score: 85.1149 bits (209), Expect = 5.959e-16
Identity = 41/94 (43.62%), Postives = 60/94 (63.83%), Query Frame = -3 
Query:  167 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 448
            +LKPL DRV +K A AEE T GGL + +  KEKP  G V+AVG G + + G    + +A GN V+Y KY+G +    +G +Y+ +R S++ A+L
Sbjct:    2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPQYGEVVAVGAGKVADSGQLLEMQVAVGNKVLYGKYSGTEV-AVEGEDYLIMRESDIFAIL 94
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_LISW6 (10 kDa chaperonin OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=groS PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.758e-19
Identity = 44/92 (47.83%), Postives = 69/92 (75.00%), Query Frame = -3 
Query:  170 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAV 445
            LKPL DRV I+V EAEE TA G++L +++KEKP  G ++AVG G + E G ++PL +A G+TV+++KY+G +    +GT+Y+ LR S+++A+
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLENGTKEPLEVAEGDTVIFAKYSGTEVT-YEGTDYLILRESDILAI 92

HSP 2 Score: 93.5893 bits (231), Expect = 1.675e-18
Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = -3 
Query:  470 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGI 739
            +KPLGDRV++++   EEKT  GI LP +A+ KPQ+G++VAVG G+ +   TK  + V  G  VI++KY+GTE+ + G ++LILRE D++ I
Sbjct:    2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLENGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_BACCN (10 kDa chaperonin OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=groS PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.758e-19
Identity = 43/92 (46.74%), Postives = 68/92 (73.91%), Query Frame = -3 
Query:  467 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 739
            +KPLGDRV++++   EEKT  GI LP TA+ KPQ G+V+AVG G+ +    ++ + V  G ++I+SKYAGTE+++ G ++LILRE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDRIIFSKYAGTEVKYEGTDYLILRESDILAVI 93

HSP 2 Score: 93.2041 bits (230), Expect = 2.188e-18
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = -3 
Query:  167 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 445
            LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG + K  +GT+Y+ LR S+++AV+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDRIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_ANASP (10 kDa chaperonin OS=Anabaena sp. (strain PCC 7120) GN=groS PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.758e-19
Identity = 44/94 (46.81%), Postives = 68/94 (72.34%), Query Frame = -3 
Query:  467 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 745
            +++KPLGDRV VK+   EEKT GG++LP TA+ KPQ GEVVA+G GK     ++ ++ VK G +V+YSKYAGT+++     +++L E D++ ++
Sbjct:    9 STVKPLGDRVFVKVSASEEKTAGGLYLPDTAKEKPQVGEVVALGAGKRNDDGSRQELEVKVGDKVLYSKYAGTDVKLGTEEYVLLSEKDILAVV 102

HSP 2 Score: 92.4337 bits (228), Expect = 3.732e-18
Identity = 44/97 (45.36%), Postives = 69/97 (71.13%), Query Frame = -3 
Query:  167 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVL 454
            +  +KPL DRVF+KV+ +EE TAGGL L + +KEKP +G V+A+G G  +++G+R+ L +  G+ V+YSKYAG D K G++   Y+ L   +++AV+
Sbjct:    8 VSTVKPLGDRVFVKVSASEEKTAGGLYLPDTAKEKPQVGEVVALGAGKRNDDGSRQELEVKVGDKVLYSKYAGTDVKLGTE--EYVLLSEKDILAVV 102
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_MYCUA (10 kDa chaperonin OS=Mycobacterium ulcerans (strain Agy99) GN=groS PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.521e-19
Identity = 46/96 (47.92%), Postives = 68/96 (70.83%), Query Frame = -3 
Query:  164 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 448
            ++KPL D++ ++  EAE TTA GL++ + +KEKP  G V+AVGPG  DE+G ++ PL +A G+TV+YSKY G + K   G  Y+ L A +V+AV+S
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YGGEEYLILSARDVLAVVS 99

HSP 2 Score: 82.0333 bits (201), Expect = 5.045e-15
Identity = 41/94 (43.62%), Postives = 60/94 (63.83%), Query Frame = -3 
Query:  467 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK--TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 742
            +IKPL D++LV+    E  T  G+ +P TA+ KPQ G VVAVG G+    G+ ++ + V  G  VIYSKY GTE+++ G  +LIL   DV+ ++
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYGGEEYLILSARDVLAVV 98
[Close]
BLAST of CX671770 vs. ExPASy Swiss-Prot
Match: CH10_MYCMM (10 kDa chaperonin OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=groS PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.521e-19
Identity = 46/96 (47.92%), Postives = 68/96 (70.83%), Query Frame = -3 
Query:  164 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 448
            ++KPL D++ ++  EAE TTA GL++ + +KEKP  G V+AVGPG  DE+G ++ PL +A G+TV+YSKY G + K   G  Y+ L A +V+AV+S
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YGGEEYLILSARDVLAVVS 99

HSP 2 Score: 82.0333 bits (201), Expect = 5.045e-15
Identity = 41/94 (43.62%), Postives = 60/94 (63.83%), Query Frame = -3 
Query:  467 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK--TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 742
            +IKPL D++LV+    E  T  G+ +P TA+ KPQ G VVAVG G+    G+ ++ + V  G  VIYSKY GTE+++ G  +LIL   DV+ ++
Sbjct:    5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYGGEEYLILSARDVLAVV 98
The following BLAST results are available for this feature:
BLAST of CX671770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH10_MYCBP4.409e-1947.9210 kDa chaperonin OS=Mycobacterium bovis (strain B... [more]
CH10_MYCBO4.409e-1947.9210 kDa chaperonin OS=Mycobacterium bovis GN=groS P... [more]
CH10_LACPL4.409e-1950.5510 kDa chaperonin OS=Lactobacillus plantarum GN=gr... [more]
CH10_CLOB84.409e-1949.4610 kDa chaperonin OS=Clostridium beijerinckii (str... [more]
CH10_CHLPB4.409e-1948.9410 kDa chaperonin OS=Chlorobium phaeobacteroides (... [more]
CH10_LISW65.758e-1947.8310 kDa chaperonin OS=Listeria welshimeri serovar 6... [more]
CH10_BACCN5.758e-1946.7410 kDa chaperonin OS=Bacillus cereus subsp. cytoto... [more]
CH10_ANASP5.758e-1946.8110 kDa chaperonin OS=Anabaena sp. (strain PCC 7120... [more]
CH10_MYCUA7.521e-1947.9210 kDa chaperonin OS=Mycobacterium ulcerans (strai... [more]
CH10_MYCMM7.521e-1947.9210 kDa chaperonin OS=Mycobacterium marinum (strain... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13A11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13A11-A21-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671770 ID=CX671770; Name=CX671770; organism=Citrus sinensis; type=EST; length=906bp
TTTTTTTTAAGCAAAAAACAAGCAGCAATTCGATTGATCAAGCTGCAATT
CTTTATGTTCAAATAAGATTACATTCAAAATCCGTATGCCTTGAGGCAAC
TCAACCATAAAATTCAATTCACTAATACATATAAAGCCTCGCTCAAGTAA
ACACAGACAACTAAGAGAGCACAGCCATCACTTCAGAAGCTCTTAAAGCA
ATGTAGTTGGTACCATCACTGCCCTTGAAGTCATTCCCTGCATACTTGGA
ATACATCACCGTGTTCCCTGGAGCAATGGATAGAGGTTTCCTATTACCTT
CCTCATCTAGAGGACCGGGTCCAACAGCAATGACCATTCCAATGGAAGGT
TTCTCCTTGCTTGCCTCCGTCAACAACAAACCTCCAGCAGTTGTCTCCTC
AGCCTCAGCAACCTTGATGAAAACTCTGTCATTAAGGGGCTTAAGATCCT
TGATTTCATCTGTTTCAAGAATGCCAACTACGTCATCCTCCCTCAATATG
AGATGATTTGCGCCATTGAACTCCAACTCAGTCCCTGCATACTTCGAATA
GATGACCTGGGTCCCAGGCTTCACAGATATGTCCAGTTTAGTCTTCCCAA
CTGTCTTCCCCTCGCCAACAGCTACCACCTCACCTGCTTGAGGCTTTGTT
TGAGCTGTAGATGGCAGAAAAATACCACCATCAGTTTTCTCCTCTACAGT
CTTGATTTTCACCAGCACTCTATCACCCAAAGGTTTAATTGAAGTGTACT
TGGGAGCCACGACTGCAGCGGCTTTAACGACCAAGCGACGGAAAGAGCGT
TGGCTGGGAGCACCTCCGACGGAAGCGAACTTGACGGAAGACGGTCTGAG
ACCATCGAATGAAGTCAAGCTCCTTGCTGGAACCTTAATTGATGACGCTG
TTAGCT
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