CX671767

Overview
NameCX671767
Unique NameCX671767
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length761
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX671767 vs. ExPASy Swiss-Prot
Match: STSY_RAUMA (Strictosidine synthase (Fragment) OS=Rauvolfia mannii GN=STR1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.460e-11
Identity = 37/110 (33.64%), Postives = 57/110 (51.82%), Query Frame = 1 
Query:  427 IDASDGTLYFTVSSTKYTPADFYKDMAEGNPYGQLLKYDPKSNQTTVLQEGFYFANGVALSKDEDFVVVCESWKFRCRRYWLKGDRNGTLDTFAENLPGGPDNINLAPDG 756
            +D   G +YFT  ST Y      + M   +  G+L+KYDP + +TT+L +  +   G  +S D  FV+V E    +  +YWL+G + GT +   + +P  P NI    DG
Sbjct:  153 VDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IP-NPGNIKRNADG 260
The following BLAST results are available for this feature:
BLAST of CX671767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
STSY_RAUMA7.460e-1133.64Strictosidine synthase (Fragment) OS=Rauvolfia man... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13A09_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13A09-A17-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671767 ID=CX671767; Name=CX671767; organism=Citrus sinensis; type=EST; length=761bp
AGTGATTTGAAGCTCATGGCTCCGAAGAGTTTCCTGCTAGCTTGTTTACT
TGCTTTTACTCTACAATTCTTCTTCTCGCCTCCAGTATCATCTTCAGCTT
CTCTTCTTTCCACCTCCAAGGAAAGCTCCTCTATGAAGGATTTGATTAAA
CTTGGAGAAGGATGTGTGAGCCACCCAGAGGATGTTTCTGTTGTGGTTAG
AAAGGGTGCGCTGTATACAGCTACTAATGATGGTTGGGTCAAGTATTTCA
TCCTCCATAATGAAACCTTGGTTAATTGGAAGCACATAGACAGTCAATCT
CTTCTTGGACTCACAACAACAAAGGAAGGTGACGTCGTTATATGCGACAG
TAAAAAAGGTTTGTTTAAGGTTACCGAAGAAGGCGTAAAGGTTCTTGATC
CAGATGTAAGATTTGCAAATGATGTGATCGATGCATCAGATGGCACGTTG
TATTTTACTGTCTCAAGCACCAAATATACCCCCGCAGATTTCTACAAAGA
CATGGCTGAGGGAAATCCTTACGGCCAGTTGCTCAAATATGATCCTAAAT
CGAACCAAACAACAGTTTTGCAAGAGGGATTTTACTTTGCTAATGGCGTT
GCACTCTCAAAAGATGAAGACTTTGTGGTCGTTTGTGAATCATGGAAATT
CCGATGCAGAAGATATTGGCTGAAGGGCGATCGCAATGGAACATTAGATA
CTTTTGCTGAAAACCTTCCAGGTGGACCTGATAACATCAATCTTGCCCCC
GATGGCTCTTT
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