CX671757

Overview
NameCX671757
Unique NameCX671757
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length764
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671757 vs. ExPASy Swiss-Prot
Match: EFTU_NOVAD (Elongation factor Tu OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=tuf PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.595e-21
Identity = 77/233 (33.05%), Postives = 110/233 (47.21%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEG--DNMIERSTNLDWYKGPTLLDALD-NINEPKRP 762
            + K H NI  IGHVD GK+T T  +                K  AE     F     +DK   ERERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D A+L++++  G          QTREH LLA  +GV  ++   NK+D       +   + +  EV   L    +  + +P V    ++  EG  DN+ + S N        L+ A+D  I +P RP
Sbjct:    8 RNKPHCNIGTIGHVDHGKTTLTAAIT---------------KVLAEQGGAEFTDYANIDKAPEERERGITISTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVNAADGPMP-------QTREHILLARQVGVPALVVYMNKVDQVD---DEEILELVELEVRELLSSYDFPGDDIPIVKGSALAALEGRDDNIGKDSIN-------ALMAAVDAYIPQPPRP 208          
BLAST of CX671757 vs. ExPASy Swiss-Prot
Match: EFTU_MYCS2 (Elongation factor Tu OS=Mycobacterium smegmatis GN=tuf PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.595e-21
Identity = 80/232 (34.48%), Postives = 121/232 (52.16%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKG-PTLLDALD-NINEPKR 759
            + K H+NI  IGHVD GK+T T         I K + ++F     ++N+ R+F     +D    ER+RGITI+I+  +++T + +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK DA      +   + +  EV   L    ++ E+ P V +S     EGD          W K    L++A+D +I +P R
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFP----DLNESRAFDQ---IDNAPEERQRGITINISHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDAVD---DEELIELVEMEVRELLAAQDFD-EEAPVVRVSALKALEGDP--------KWVKSVEELMEAVDASIPDPVR 206          
BLAST of CX671757 vs. ExPASy Swiss-Prot
Match: EFTU_MAGSM (Elongation factor Tu OS=Magnetococcus sp. (strain MC-1) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.595e-21
Identity = 72/228 (31.58%), Postives = 106/228 (46.49%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRP 762
            + K H+NI  IGHVD GK+T T  +                K  A   +  F+    +D    ERERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D  +L++ +  G          QTREH LLA  +GV  ++   NK+D       +   + +  EV   L    +  + +P +  S  +     E    +D      L+DA+D  I EP+RP
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTAAIT---------------KVMAAAGRAEFRAYDQIDGAPEERERGITISTAHVEYETEARHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADGPMP-------QTREHILLARQVGVPALVVFLNKVDQVD---DEELLELVEMEVRELLSSYDFPGDDIPVIKGSALKALEGEESEMGVDAIN--RLMDAVDAYIPEPERP 208          
BLAST of CX671757 vs. ExPASy Swiss-Prot
Match: EFTU_FLAFE (Elongation factor Tu OS=Flavobacterium ferrugineum GN=tuf PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.595e-21
Identity = 75/229 (32.75%), Postives = 113/229 (49.34%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRP 762
            +EK H+NI  IGHVD GK+T T  +   L           +K  A+  K        +D    E+ERGITI+ A  ++ET   +   +D PGH D++KNMITG +Q D A+L++ ++ G          QT+EH LLA  +GV +M+   NK+D       +   + +  EV   L K G++ +  P +     +G      +    W K    L+DA+D+ I  P RP
Sbjct:    8 REKPHVNIGTIGHVDHGKTTLTAAITDILS----------KKGLAQAKKYD-----EIDGAPEEKERGITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAASDGPMP-------QTKEHILLAAQVGVPKMVVFLNKVDLVD---DEELLELVEIEVREELTKRGFDGDNTPII-----KGSATGALAGEEKWVKEIENLMDAVDSYIPLPPRP 206          
BLAST of CX671757 vs. ExPASy Swiss-Prot
Match: EFTU_DEIGD (Elongation factor Tu OS=Deinococcus geothermalis (strain DSM 11300) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.595e-21
Identity = 69/225 (30.67%), Postives = 109/225 (48.44%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGP------TLLDALD 738
            + K H+N+  IGHVD GK+T T  + +    +D  V    EK A +           +DK   E+ RGITI+ A  ++ T   + + +D PGH D++KNMITG +Q D A+L++ S  G          QTREH LLA  +GV  ++   NK+D       +   + +  EV   L K  +  + +P +  S  +    ++++      + P       LLDA+D
Sbjct:    8 RTKPHVNVGTIGHVDHGKTTLTAAITFTAAAMDPTV----EKLAYDQ----------IDKAPEEKARGITINTAHVEYNTPARHYSHVDCPGHADYVKNMITGAAQMDGAILVVSSADGPMP-------QTREHILLARQVGVPYIVVFMNKVDMVD---DEELLELVEMEVRELLSKYEFPGDDLPVIKGSALQALEALQQNPKTARGENPWVDKIWELLDAID 208          
BLAST of CX671757 vs. ExPASy Swiss-Prot
Match: EFTU_CYACA (Elongation factor Tu, chloroplastic OS=Cyanidium caldarium GN=tufA PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.595e-21
Identity = 65/190 (34.21%), Postives = 97/190 (51.05%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRV-IERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 648
            + K HINI  IGHVD GK+T T  +   L  ID  V +++F++               +D    E+ RGITI+ +  +++T   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NK D       +   + +  EV   L K  +  E+VPFV
Sbjct:    8 RSKPHINIGTIGHVDHGKTTLTAAISAVLASIDNTVKLKKFDE---------------IDAAPEEKARGITINTSHVEYQTPLRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPSIVVFLNKADMID---DEELLELVELEVRELLSKYDFPGEEVPFV 172          
BLAST of CX671757 vs. ExPASy Swiss-Prot
Match: EFTU_CLOTE (Elongation factor Tu OS=Clostridium tetani GN=tufA PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.595e-21
Identity = 68/190 (35.79%), Postives = 99/190 (52.11%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV 648
            + K H+NI  IGHVD GK+T T  +   LG       + F K        +FKY  + DK   E+ERGITI  +  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV+ ++   NK D    +   A   E+V+ EV   + + G+  +  P V
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAITTILGH------KGFAK--------AFKYDEI-DKAPEEKERGITISTSHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVEHIVVFLNKAD----QVDDAELIELVEMEVRELMNEYGFPGDDAPVV 171          
BLAST of CX671757 vs. ExPASy Swiss-Prot
Match: EFTU3_STRCO (Elongation factor Tu-3 OS=Streptomyces coelicolor GN=tuf3 PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.595e-21
Identity = 81/223 (36.32%), Postives = 110/223 (49.33%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFET-TRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGDNMIERSTNLDWYKGPTLLDALD 738
            + K H+NI  +GHVD GK+T T         I K + ER      +    SF     +D+   E  RGITI+IA  ++ET TR+Y  V D PGH D++KNM+TG +Q D A+L++ +  G          QT EH LLA  +GV  ++   NK DA   + +    D +  EV   L   GY  + VP V +SG    EGD     S          LLDA+D
Sbjct:    8 RTKPHLNIGTMGHVDHGKTTLTA-------AITKVLAERGAGSTTQYV--SFDR---IDRAPEEAARGITINIAHVEYETDTRHYAHV-DMPGHADYVKNMVTGAAQLDGAILVVSALDGIMP-------QTAEHVLLARQVGVDHIVVALNKADAGDEELT----DLVELEVRELLTAHGYGGDAVPVVRVSGLKALEGDPRWTASVE-------ALLDAVD 199          
BLAST of CX671757 vs. ExPASy Swiss-Prot
Match: EFTU_RICM5 (Elongation factor Tu OS=Rickettsia massiliae (strain Mtu5) GN=tuf PE=3 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 4.695e-21
Identity = 73/233 (31.33%), Postives = 110/233 (47.21%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKR 759
            + K H+NI  IGHVD GK++ T  +   + K GG      ++                  +D    E+ERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  M+   NK+D           + +  EV   L K G+  +++P +    +   EG    E + N        L+DA+D+ I +P R
Sbjct:    8 RTKPHVNIGTIGHVDHGKTSLTAAITIVLAKTGGAQATAYDQ------------------IDAAPEEKERGITISTAHVEYETKNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPAMVVFLNKVDMVD---DPDLLELVEMEVRELLSKYGFPGDEIPIIKGSALQALEGKPEGEEAIN-------ELMDAVDSYIPQPVR 205          
BLAST of CX671757 vs. ExPASy Swiss-Prot
Match: EFTU_RICHE (Elongation factor Tu OS=Rickettsia helvetica GN=tuf PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.695e-21
Identity = 73/233 (31.33%), Postives = 111/233 (47.64%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKR 759
            + K H+NI  IGHVD GK++ T  +   + K GG      ++                  +D    E+ERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  M+   NK+D           + +  EV   L K G+  +++P +    +   EG    E++ N        L+DA+D+ I +P R
Sbjct:    8 RTKPHVNIGTIGHVDHGKTSLTAAITIVLAKTGGAKATAYDQ------------------IDAAPEEKERGITISTAHVEYETKNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPAMVVFLNKVDMVD---DPDLLELVEMEVRELLSKYGFPGDEIPVIKGSALQALEGKPEGEKAIN-------ELMDAVDSYIPQPVR 205          
The following BLAST results are available for this feature:
BLAST of CX671757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_NOVAD3.595e-2133.05Elongation factor Tu OS=Novosphingobium aromaticiv... [more]
EFTU_MYCS23.595e-2134.48Elongation factor Tu OS=Mycobacterium smegmatis GN... [more]
EFTU_MAGSM3.595e-2131.58Elongation factor Tu OS=Magnetococcus sp. (strain ... [more]
EFTU_FLAFE3.595e-2132.75Elongation factor Tu OS=Flavobacterium ferrugineum... [more]
EFTU_DEIGD3.595e-2130.67Elongation factor Tu OS=Deinococcus geothermalis (... [more]
EFTU_CYACA3.595e-2134.21Elongation factor Tu, chloroplastic OS=Cyanidium c... [more]
EFTU_CLOTE3.595e-2135.79Elongation factor Tu OS=Clostridium tetani GN=tufA... [more]
EFTU3_STRCO3.595e-2136.32Elongation factor Tu-3 OS=Streptomyces coelicolor ... [more]
EFTU_RICM54.695e-2131.33Elongation factor Tu OS=Rickettsia massiliae (stra... [more]
EFTU_RICHE4.695e-2131.33Elongation factor Tu OS=Rickettsia helvetica GN=tu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13A03_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13A03-A5-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671757 ID=CX671757; Name=CX671757; organism=Citrus sinensis; type=EST; length=764bp
CAATTTCCGAAGGGCGGCGAGAGAGAACCATTTTCGCGAATATCATTTTA
ATAAGGTTTTTTCTAGATTTGCATAATGGGTAAGGAGAAGACTCACATCA
ACATTGTGGTCATCGGCCATGTCGACTCTGGAAAGTCGACCACCACCGGA
CACTTGATCTACAAGCTTGGTGGTATTGACAAGCGTGTGATCGAGAGGTT
CGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCATTCAAATACGCCTGGG
TGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTATTACCATTGATATT
GCCTTGTGGAAGTTCGAGACCACCAGGTACTACTGCACCGTCATTGATGC
TCCTGGACATCGTGACTTTATCAAGAACATGATTACCGGTACCTCACAGG
CTGACTGTGCCGTCCTTATCATTGACTCTACCACCGGTGGTTTTGAAGCT
GGTATCTCCAAGGATGGTCAGACTCGTGAGCATGCTTTGCTTGCTTTCAC
CCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAAGATGGATGCCACCA
CCCCCAAGTACTCAAAGGCTAGGTACGATGAAATTGTGAAGGAGGTCTCT
TCCTACCTGAAGAAGGTTGGATACAACCCCGAGAAAGTCCCATTCGTGCC
CATCTCTGGTTTCGAGGGTGACAACATGATTGAGAGGTCTACCAACCTTG
ACTGGTACAAGGGTCCAACCCTGCTGGATGCTCTTGACAATATCAATGAG
CCGAAGAGGCCCTC
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