CX671750
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671750 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.788e-29 Identity = 76/187 (40.64%), Postives = 98/187 (52.41%), Query Frame = 1 Query: 274 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAH 813 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG Q + + +L + I WA +I G V + D YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL H Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA-----CQVILMGAVEGYRVAGGPLGEVVDPLYPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 245
BLAST of CX671750 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.788e-29 Identity = 76/187 (40.64%), Postives = 99/187 (52.94%), Query Frame = 1 Query: 274 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAH 813 P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL+K G+ W+ AG Q + + L + I WA ++ G + + G D YPGG FDPLG + PE EL+ KEIKNGRLAM ++ G + Q I TG GPI+NL H Sbjct: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWA-----TQVVLMGLIEGYRVGGGPLGEGLDPLYPGGA-FDPLGL-ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADH 244
BLAST of CX671750 vs. ExPASy Swiss-Prot
Match: CB4A_SOLLC (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 8.866e-29 Identity = 80/215 (37.21%), Postives = 111/215 (51.63%), Query Frame = 1 Query: 196 AGTRSVSVSAAAADPNRPLWFPGS------TPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGEQEYFT---DTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNK-------LTGTDVGYPGGLWFDPL--------GWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQ 768 A + +V AAAA + W P PEWLDGSLPGD+GFDPLGLG DP L+W ++E++H RWAM GIF+ + + + W+ AG TL ++I +GW E +RW D P + + P +K TG + GYPGG +FDPL G EK++ L+ EIK+ RLAMLA++ +F+ Sbjct: 39 ATPKRFTVLAAAAKKS---WIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGI------PWFEAGADPGAIAPFSFGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTAENFANFTG-EQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARLAMLAMLIFYFE 243
BLAST of CX671750 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 8.866e-29 Identity = 75/187 (40.11%), Postives = 98/187 (52.41%), Query Frame = 1 Query: 274 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAH 813 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG Q + + +L + I WA ++ G V + D YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL H Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA-----CQVVLMGAVEGYRVAGGPLGEVVDPLYPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 247
BLAST of CX671750 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 8.866e-29 Identity = 75/187 (40.11%), Postives = 98/187 (52.41%), Query Frame = 1 Query: 274 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAH 813 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG Q + + +L + I WA ++ G V + D YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL H Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA-----CQVVLMGAVEGYRVAGGPLGEVVDPLYPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 246
BLAST of CX671750 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 8.866e-29 Identity = 76/188 (40.43%), Postives = 99/188 (52.66%), Query Frame = 1 Query: 271 PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAH 813 PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ W+ AG Q + + +L + I WA ++ G V I D YPGG FDPLG + PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL H Sbjct: 65 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA-----VQVVLMGAVEGYRIAGGPLGEVVDPLYPGGA-FDPLGL-ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 245
BLAST of CX671750 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 1.158e-28 Identity = 76/188 (40.43%), Postives = 99/188 (52.66%), Query Frame = 1 Query: 271 PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAH 813 PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ W+ AG Q + + +L + I WA ++ G V I D YPGG FDPLG + PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL H Sbjct: 61 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA-----VQVVLMGAVEGYRIAGGPLGEVVDPLYPGGS-FDPLGL-ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 241
BLAST of CX671750 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.158e-28 Identity = 80/215 (37.21%), Postives = 109/215 (50.70%), Query Frame = 1 Query: 196 AGTRSVSVSAAAADPNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAH 813 A + VS S+ +R L+ PP +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG Q + + +L + + WA ++ G V I D YPGG FDPLG P+ EL+ KEIKNGRLAM ++ G + Q I TG GP+++L H Sbjct: 39 AKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWA-----CQVVLMGAVEGYRIAGGPLGEIVDPLYPGGS-FDPLGLAE-RPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADH 246
BLAST of CX671750 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.512e-28 Identity = 74/187 (39.57%), Postives = 98/187 (52.41%), Query Frame = 1 Query: 274 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAH 813 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG Q + + +L + I WA ++ G V + D YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q + TG GP++NL H Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA-----CQVVLMGAVEGYRVAGEPLGEVVDPLYPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADH 246
BLAST of CX671750 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.512e-28 Identity = 77/201 (38.31%), Postives = 104/201 (51.74%), Query Frame = 1 Query: 238 PNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAH 813 P+RP + P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PE+L+K G+ W+ AG Q + + L + I WA ++ G V + G D YPGG FDPLG + P+ EL+ KE+KNGRLAM ++ G + Q I TG GPI+NL H Sbjct: 50 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWA-----VQVVLMGFVEGYRVGGGPLGEGLDKVYPGGA-FDPLGL-ADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDH 243 The following BLAST results are available for this feature:
BLAST of CX671750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671750 ID=CX671750; Name=CX671750; organism=Citrus sinensis; type=EST; length=814bpback to top |