CX671750
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671750 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.512e-28 Identity = 77/201 (38.31%), Postives = 104/201 (51.74%), Query Frame = 1 Query: 238 PNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAH 813 P+RP + P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PE+L+K G+ W+ AG Q + + L + I WA ++ G V + G D YPGG FDPLG + P+ EL+ KE+KNGRLAM ++ G + Q I TG GPI+NL H Sbjct: 50 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWA-----VQVVLMGFVEGYRVGGGPLGEGLDKVYPGGA-FDPLGL-ADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDH 243
BLAST of CX671750 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.512e-28 Identity = 75/188 (39.89%), Postives = 100/188 (53.19%), Query Frame = 1 Query: 271 PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAH 813 PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL++ G+ W+ AG Q + + +L + I WA ++ G V I D YPGG FDPLG + PE EL+ KE+KNGRLAM ++ G + Q I TG GP++NL H Sbjct: 62 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA-----CQVVLMGAVEGYRIAGGPLGEVVDPLYPGGS-FDPLGL-ADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 242
BLAST of CX671750 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.975e-28 Identity = 77/201 (38.31%), Postives = 102/201 (50.75%), Query Frame = 1 Query: 238 PNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAH 813 P+RP + P +L G PGD+G+D + +DPET N + E++HCRWAMLGA G PELL K G+ W+ AG Q + + L + I WA ++ G + + G D PGG FDPLG + PE EL+ KEIKNGRLAM ++ G + Q I TG GPI+NL H Sbjct: 53 PDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWA-----CQVVLMGLIEGYRVGGGTLGEGLDPLLPGGA-FDPLGL-ADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDH 246
BLAST of CX671750 vs. ExPASy Swiss-Prot
Match: CB4B_SOLLC (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.580e-28 Identity = 78/208 (37.50%), Postives = 108/208 (51.92%), Query Frame = 1 Query: 217 VSAAAADPNRPLWFPGS------TPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGEQEYFT---DTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNK-------LTGTDVGYPGGLWFDPL--------GWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQ 768 V+AAA P + W P PEWLDGSLPGDFGFDPLGLG DP L+W ++E++H RWAM GIF+ + + + W+ AG +L +++ +GW E +RW D + D P +K TG + GYPGG +FDPL G EK++ L+ EIK+ RLAMLA++ +F+ Sbjct: 44 VAAAAVAPKKS-WIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKTAENFANFTG-EQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKLAEIKHSRLAMLAMLIFYFE 243
BLAST of CX671750 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.580e-28 Identity = 82/217 (37.79%), Postives = 114/217 (52.53%), Query Frame = 1 Query: 199 GTRSVSVSAAAA--DPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAH 813 G +SV+ S + P+R ++ F G PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ W+ AG Q + + + L + I WA +I G + + TD YPGG FDPLG + P+ +++ KEIKNGRLAM ++ G + Q I TG GPI+NL H Sbjct: 50 GRKSVAASIDSPWYGPDRVMYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWA-----CQVILMGAIEGYRVAGGPLGEVTDPIYPGGN-FDPLGL-ADDPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADH 258
BLAST of CX671750 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.580e-28 Identity = 75/188 (39.89%), Postives = 100/188 (53.19%), Query Frame = 1 Query: 271 PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAH 813 PP +L G PGD+G+D GL +DPET N + E++H WAMLGA G PELL++ G+ W+ AG Q + + +L + I WA ++ G V I TD YPGG FDPLG + PE EL+ KE+KNGRLAM ++ G + Q I TG GP++NL H Sbjct: 6 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA-----CQVVLMGAVEGYRIAGGPLGEVTDPIYPGGS-FDPLGL-ADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 186
BLAST of CX671750 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.369e-28 Identity = 78/193 (40.41%), Postives = 102/193 (52.85%), Query Frame = 1 Query: 256 FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAH 813 F G TP +L+G GD+G+D GL SDPET N + E++H RWAMLGA G PELL K G+ W+ AG Q + + +L + I WA ++ G V + TD YPGG FDPLG + P+ EL+ KEIKNGRLAM ++ G + Q I TG GP++NL H Sbjct: 64 FSGETP-SYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWA-----CQVVLMGAVEGYRVAGGPLGEVTDPIYPGGS-FDPLGL-ADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDH 248
BLAST of CX671750 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.369e-28 Identity = 74/187 (39.57%), Postives = 97/187 (51.87%), Query Frame = 1 Query: 274 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAH 813 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG Q + + +L + I WA ++ G V + D YPGG FDPLG PE EL+ K IKNGRLAM ++ G + Q I TG GP++NL H Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA-----CQVVLMGAVEGYRVAGGPLGEVVDPLYPGGS-FDPLGLAE-DPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 247
BLAST of CX671750 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.369e-28 Identity = 74/187 (39.57%), Postives = 98/187 (52.41%), Query Frame = 1 Query: 274 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAH 813 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PEL + G+ W+ AG Q + + +L + I WA ++ G V + D YPGG FDPLG + PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL H Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA-----CQVVLMGAVEGYRVAGGPLGEVIDPLYPGGS-FDPLGL-ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH 246
BLAST of CX671750 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.369e-28 Identity = 80/201 (39.80%), Postives = 104/201 (51.74%), Query Frame = 1 Query: 238 PNRPLWF-PGSTP-PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAH 813 P+RP + P S P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL K G+ W+ AG Q + + L + I WA ++ G V + G D YPGG FDPLG + P+ EL+ KE+KNGRLAM ++ G + Q I TG GPI NL H Sbjct: 52 PDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWA-----TQVVLMGFVEGYRVGGGPLGEGLDPLYPGGA-FDPLGL-ADDPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDH 245 The following BLAST results are available for this feature:
BLAST of CX671750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671750 ID=CX671750; Name=CX671750; organism=Citrus sinensis; type=EST; length=814bpback to top |