CX671749

Overview
NameCX671749
Unique NameCX671749
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671749 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.202e-30
Identity = 78/191 (40.84%), Postives = 102/191 (53.40%), Query Frame = -3
Query:  225 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 776
            P +L G  PGD+G+D   L +DPET   N + E++HCRWAMLGA G   PELL + G+      W+ AG Q +      +    +L   + I   WA       ++  G V    +         D  YPGG  FDPLG  +  PE   EL+ KEIKNGRLAM ++ G + Q I TG GP++NL  HLADP
Sbjct:   68 PSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA-----CQVVLMGAVEGYRVAGGPLGEVVDPLYPGGS-FDPLGL-ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 251          
BLAST of CX671749 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.182e-30
Identity = 80/201 (39.80%), Postives = 106/201 (52.74%), Query Frame = -3
Query:  195 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 776
            P +L G  PGD+G+D  GL +DPET   N + E++H RWAMLGA G   PELL + G+      W+ AG Q +      +    +L   + I   WA       +I  G V    +         D  YPGG  FDPLG     PE+  EL+ KE+KNGRLAM ++ G + Q I TG GP++NL  HLADP +   +A  T
Sbjct:   65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWA-----TQVILMGAVEGYRVAGGPLGEIVDPLYPGGS-FDPLGLAE-DPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFAT 258          
BLAST of CX671749 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.182e-30
Identity = 79/191 (41.36%), Postives = 103/191 (53.93%), Query Frame = -3
Query:  225 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 776
            P +L G  PGD+G+D  GL +DPET   N + E++H RWAMLGA G   PELL++ G+      W+ AG Q +      +    +L   + I   WA       +I  G V    I         D  YPGG  FDPLG  +  PE   EL+ KE+KNGRLAM ++ G + Q I TG GP++NL  HLADP
Sbjct:   70 PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA-----TQVILMGAVEGYRIAGGPLGEVVDPLYPGGS-FDPLGL-ADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 253          
BLAST of CX671749 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.133e-30
Identity = 78/191 (40.84%), Postives = 100/191 (52.36%), Query Frame = -3
Query:  225 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 776
            P +L G  P D+G+D  GL +DPET   N + E++HCRWAMLGA G   PEL  + GI      W+ AG Q +      +    +L   + I   WA       ++  G V    +         D  YPGG  FDPLG     PE   EL+ KEIKNGRLAM ++ G + Q I TG GP++NL  HLADP
Sbjct:   68 PSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWA-----CQVVLMGAVEGYRVAGGPLGEVIDPLYPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 251          
BLAST of CX671749 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.316e-30
Identity = 78/191 (40.84%), Postives = 103/191 (53.93%), Query Frame = -3
Query:  225 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 776
            P +L G  PGD+G+D  GL +DPET   N + E++H RWAMLGA G   PELL++ G+      W+ AG Q +      +    +L   + I   WA       +I  G V    I         D  YPGG  FDPLG  +  PE   EL+ KE+KNGRLAM ++ G + Q I TG GP++NL  HL+DP
Sbjct:   69 PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA-----TQVILMGAVEGYRIAGGPLGEVVDPLYPGGS-FDPLGL-ADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDP 252          
BLAST of CX671749 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.711e-29
Identity = 76/191 (39.79%), Postives = 98/191 (51.31%), Query Frame = -3
Query:  225 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 776
            P +L G  PGD+G+D  GL +DPET   N + E++HCRWAMLGA G   PEL  + G+      W  AG Q +      +    +L   + I   WA       ++  G V    +         D  YPGG  FDPLG     PE   EL+ KE KNGRLAM ++ G + Q I TG GP++NL  HL DP
Sbjct:   68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA-----CQVLLMGAVEGYRVAGGPLGVVVDPLYPGGS-FDPLGLAE-DPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDP 251          
BLAST of CX671749 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.711e-29
Identity = 78/201 (38.81%), Postives = 103/201 (51.24%), Query Frame = -3
Query:  195 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 776
            P +L G  PGD+G+D  GL +DP T   N + E++HCRW MLGA G   PEL  + G+      W+ AG Q +      +    +L   + I   WA       ++  G V    +         D  YPGG  FDPLG  +  PE   EL  KEIKNGRLAM ++ G + Q I TG GP++NL  HLADP +   +A  T
Sbjct:   67 PSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWA-----CQVVLMGAVEGYRVAGGPLGEVIDPLYPGGS-FDPLGL-ADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFAT 260          
BLAST of CX671749 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.540e-29
Identity = 78/191 (40.84%), Postives = 101/191 (52.88%), Query Frame = -3
Query:  225 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 776
            P +L G  PGD+G+D  GL +DPET   N + E++H RWAMLGA G   PELL++ G+      W+ AG Q +      +    +L   + I   WA       +I  G V    I         D  YPGG  FDPLG     PE   EL+ KE+KNGRLAM ++ G +   I TG GP++NL  HLADP
Sbjct:   29 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA-----TQVILMGAVEGYRIAGGPLGEVVDPLYPGGS-FDPLGLAE-VPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADP 212          
BLAST of CX671749 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.038e-29
Identity = 84/228 (36.84%), Postives = 112/228 (49.12%), Query Frame = -3
Query:  195 TAGTRSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 857
            TA T+ V       D  + L       P +L G  PGD+G+D  GL +DPET   N + E++H RWAMLGA G   PELL + G+      W+  G Q +      +    +L   + I   WA       ++  G V    +         D  YPGG  FDPLG    + E   EL+ KEIKNGRLAM ++ G + Q I TG GP++NL  HLADP +   +A  T
Sbjct:   38 TAATKKVGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWA-----CQVVLMGAVEGYRVAGGPLGEVVDPLYPGGS-FDPLGLADDA-EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFAT 258          
BLAST of CX671749 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.886e-29
Identity = 78/203 (38.42%), Postives = 104/203 (51.23%), Query Frame = -3
Query:  195 TPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 782
            +PP +L G  PGD+G+D  GL +DPET   N + E++HCRWA+    G   PELL + G+      W+ AG Q +           +L   + I   WA       ++  G V    +         D  Y GG  FDPLG G   PE+  EL+ KEIKNGRLAM ++ G + Q I TG GPI+NL  HL DP +   +A  T
Sbjct:   63 SPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGEGVWFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWA-----CQVVLMGAVEGYHVAGGRLGEVVDPLYLGGS-FDPLGLGD-DPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLTDPVNNNAWAYAT 258          
The following BLAST results are available for this feature:
BLAST of CX671749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
CB25_PETSP3.202e-3040.84Chlorophyll a-b binding protein 91R, chloroplastic... [more]
CB23_APIGR4.182e-3039.80Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB22_PEA4.182e-3041.36Chlorophyll a-b binding protein AB80, chloroplasti... [more]
CB23_PETSP7.133e-3040.84Chlorophyll a-b binding protein 22R, chloroplastic... [more]
CB28_PEA9.316e-3040.84Chlorophyll a-b binding protein 8, chloroplastic O... [more]
CB22_PETSP2.711e-2939.79Chlorophyll a-b binding protein 22L, chloroplastic... [more]
CB21_PETSP2.711e-2938.81Chlorophyll a-b binding protein 13, chloroplastic ... [more]
CB21_PEA3.540e-2940.84Chlorophyll a-b binding protein AB96 (Fragment) OS... [more]
CB22_HORVU6.038e-2936.84Chlorophyll a-b binding protein 2, chloroplastic O... [more]
CB48_MAIZE7.886e-2938.42Chlorophyll a-b binding protein 48, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12H10_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12H10-P20-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671749 ID=CX671749; Name=CX671749; organism=Citrus sinensis; type=EST; length=898bp
TTTTTTTTTCCACCTGAATGTTTTTTATATTCATGGCATCTAAGTGATCA
CACAAGTCTTTGTACATAGATAGAGGCAATTAATACAAGTTCTAATCATA
CAACCTTTCCCTAAGAGAAACACCAATTCCTTTGATCTCAAGCTTCCTCT
TGGCCCAAATTTCTCTCCCTTTGCTCGTCATCATCTCACTTGGGGGTGAA
GGCAGCAAAAACGGTGGCATGACCAGGATCAGCAAGGTGAGCAATGAGAT
TGTCAATGGGGCCGGTGCCAGTGTAAATGTGCTGGAACCAAGCACCCATC
ACAGCCAACATAGCCAATCTTCCATTCTTGATCTCCTTAGTCCTCAGCTC
CTTTACCTTCTCGGGCGAACCGGATCCCCAGCCAAGTGGGTCAAACCAAA
GCCCACCTGGGTAACCAACATCGGTGCCGGTGAGCTTGTTGTTGGGGAAG
ATCGGGTCAGTGTTCACACAGCCTGGCTTTATAATGTCGGCCCACCGTCT
GCCCTCTGCCCAGCCTATGAATATCATCTCAACAATGAACAGGGTGGTGG
TGTCTGTGAAGTACTCTTGCTCCCCAGCTGTGTACCAGGATGGAGTGTTG
AGGATTCCAAGTTTTGTTAACAATTCCGGAATGAAAATTCCTGCAGCTCC
TAACATTGCCCATCTGCAGTGCACAATTTCTGATTGCACGTTCCATCTCA
GCGTCTCAGGATCAGATCCAAGACCAAGAGGATCGAAGCCGAAGTCTCCG
GGGAGGCTACCATCGAGCCATTCAGGAGGAGTGCTGCCTGGGAACCAGAG
AGGCCTGTTAGGATCAGCTGCAGCCGCACTCACTGAAACCGATCGTGTTC
CCGCTGTTGCTCCGTTTTTTCTCAATTTCAGCTTCTTCCCACCAAGGA
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